G217522 (LOC103361595,LOC103377102,LOC100706669)


Basic Information

Item Value
gene id G217522
gene name LOC103361595,LOC103377102,LOC100706669
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 2481005 ~ 2515645 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU294404
CTTAACAGCTTTCTTCTTGGGcccttcatcatcatcagcttCCTCGTGCTCCTGGGCCCCCTGGGTGAGGTTGGTGTAGTTTGCCAGTTTATTGAGGAGAGATGACACCATGGGGTTGCTGTCCATCTCCTCCTCAAAAAGGGCCATGTTGGTGCCATCGTAGCTGTTGCCTTTGTCATTGTCTGTGTTGTTGATAAAGGGACTGTTTTCCTTTGGGACGCCATCACCTGTggcgtcctcctcttcctctttcagtACGTTGTTGTCATCCACATCATCCTCCTCGTTCcccttttttgcctttttagtGTTGTCCTTCACTGGGACAACAGTGAAGTTGGTAGGCATTTTTACACCATGTGCTTCTTCTCAATGTCTCCTGTTTGCCGCACTCTtatctctttctcctc

Function

NR:

description
PREDICTED: solute carrier family 12 member 7-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294404 True 410 lncRNA 0.49 3 2481005 2515645

Neighbor

gene id symbol gene type direction distance location
kcnh2b kcnh2,LOC102205662,LOC101467662 coding downstream 279345 1823043 ~ 2201660 (-)
ift74 ift74 coding downstream 944815 1507736 ~ 1536190 (-)
LOC120551939 NA coding downstream 1148595 1321438 ~ 1332410 (-)
LOC120551945 NA coding downstream 1280795 1198609 ~ 1200210 (-)
vstm2a vstm2a coding downstream 2079179 294311 ~ 401826 (-)
zeb1b zeb1,LOC102790219 coding upstream 285921 2801566 ~ 2860283 (-)
map3k8 map3k8 coding upstream 696912 3212557 ~ 3220234 (-)
trnag-ucc_41 NA coding upstream 793854 3309499 ~ 3309570 (-)
LOC120552550 NA coding upstream 830111 3345756 ~ 3399840 (-)
cnn3a cnn3,LOC102798192 coding upstream 995127 3510772 ~ 3543793 (-)
LOC120552008 NA non-coding downstream 199817 2273323 ~ 2281188 (-)
LOC120552007 NA non-coding downstream 240128 2237870 ~ 2240877 (-)
G217445 NA non-coding downstream 270768 2210028 ~ 2210237 (-)
G217435 NA non-coding downstream 307449 2173300 ~ 2173556 (-)
LOC120552173 NA non-coding downstream 410587 2069365 ~ 2070418 (-)
G217528 LOC103361595 non-coding upstream 25890 2541535 ~ 2554324 (-)
G217520 gfod1,LOC101463621,LOC100711398,LOC102788772,LOC102233768,LOC106945177 non-coding upstream 94955 2610600 ~ 2621580 (-)
G217579 arhgap12 non-coding upstream 231141 2746786 ~ 2758060 (-)
G217584 NA non-coding upstream 245711 2761356 ~ 2769101 (-)
LOC120552330 NA non-coding upstream 428278 2943923 ~ 2968161 (-)
scospondin sspo,LOC104950179 other downstream 61940 2214711 ~ 2419065 (-)
LOC120552169 LOC102294047,LOC102205018 other downstream 669875 1658172 ~ 1811130 (-)
si:dkey-225n22.4 LOC104949920,LOC103365391 other downstream 1032730 1355257 ~ 1448275 (-)
svila svil other upstream 473281 2988926 ~ 3136214 (-)
LOC120552696 NA other upstream 799773 3315418 ~ 3343705 (-)
f3a NA other upstream 922157 3437802 ~ 3456044 (-)
G217780 chchd7,LOC102799933 other upstream 1177307 3692952 ~ 3704357 (-)
G217837 NA other upstream 1420365 3936010 ~ 3941329 (-)

Expression


Co-expression Network