G217528 (LOC103361595)


Basic Information

Item Value
gene id G217528
gene name LOC103361595
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 2541535 ~ 2554324 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU294412
CATCGCTCAATCtgaagttactttatgaatgaaatagacatattacatatctGAGGGCCAATACCAGgtcggttttgaatcatttacaatcccataatgttctccatctgttgaaaggcCGACTGAGATTGACTCGGTGTTTCAcccgttgtctttcactttccctttcagCTTTTAGTTGATCTTTGTTTCATTcccttctttcctgtgatggtcctgccccagtatcagccataactacaacagataacttctagAATAACATTagaatacaattaggcctatataaagaactctcctgctaccttttacctggctccACTAACCTGGCAtacactaacacaggcttttctggtgttccaaagaaatctgtgacccttcagaatgtgttactgtagctcCGTCTACCTGCCCTAAATCACTCTGTGACTTCGCAGGAAAAATCAGACCAGGGCAGAGACATTATGATAACTATATGAAACTAGcggtcttttcactgttagtctcgtttgctgttacaggtcatttatgatcatcagatagaacattacacagtttcagaaacatgtaaaagttacatatagtcactttaaagttAATATAGCATACCTGATAGCAAACACTTATTTAAacatccagcagttacagagcaacattagccttctcttggagttgtgtttgtgtccacctgatgaacGTAATAGTCACTCTCTCTTAGCTCGGTTTTTGGTCAGGGGGAAATATCTggttctttagctgctaaatgcatgggtttcaaaaccactaaaaTTAGTCATACTGTTCATaaggtatgagctgttttttatgagtggtcaaggacagaaagtgcagtttagtAATCCGTCTCTTTGCCAGTGTGCAttgtgtttgaaaataaaatacattgtgttgaatggaaaaaaaagagttcttttttttacccagacatttaaaaaaatatgttttaaagctGGAATTGCAATACCGAAATACCGTCATAgcgtgatatttttgctgaaggttatcacaCCGTCAGAATCttataccggcccatgcctagctggtagtgtacagtgggctTTAAGAACAGATTTTGGGCCCGACAGAAACTCACTATAAAGCTCTGTAAAGccgaggggagctgcagatttAGTTGATAATTCACATTGCCACGTTGCCATTTGATACAGTTTTTATTATAAAAGCATGTATTATAGCTGCTCTAAAGGATACAGTTTTCGTCTCCTCCTCTGTTCCTTGGTGGTCCGGGCATGTTGAGCAGAACCAGGTGAGCCCCCTGCGACTTGTTGACCACCACCTCGTTCATCTTGACAGCTGTGTGCATCCGGCGAACATTGGACTGGTTCAGACTCTCCCACTCTGGTTTCATGTTGAACATGTCGCGTACAGCCACATTGGCATTGTACTCTCGGTTACGATTACGCTCTGTGAAGAGCTTGTCCTTGGTCCAGGTCATGTGAACCCGATCGGGCCCAGTGTCGGCCTTGTCATTTATGGCAGCGTGAGACGCTGTGTTTCTGTCATGGATGAGCTGGGCCTAGAGAGAAGGATGAGGAAATCAAGTATTAACCAGGAGATATTTCAGGGGAGAGACGACAGAATGGAAGCTATAAACAAGGAAAGGTGGTAACAAaactacggaagaggattagggccacatgtgaaaacatttattgagttctgagtttaaagtcagaattctg
>TU294415
tatgaattAAACTACGGCTctttatacataaaaaaaattctaactgtACCCccattgtcatttttgttgctatgaacgtgCCAACAATTAACAattgaagaaataataaaaatagtctgactaataatcacttatataattacaatttgggatatctaaaaaaaatccccattgactgtaaatataaatggacaaagcatccggttcggcgaagtgctgtaaatgtggaagtgccttaaaactgtattctatctgaattccagcaggggggagactccttaaacctgcattctatctgaataccagcagggggagacacgtgCGGTGGCAAAAGGAGTTCggttctgtagaagtctatgagaaagtgacccacttctctcttgatttattacctcagtaaacattttaataatgagtttatggtcttaatcgctagttttaagtcttctgcaacacagaatgatgttcagtttttgaattatggtcttgttgattttaaaatcaacgataaaacagggggtgttttagggtgtggctatgatgtgataaCCAGTTTGCggcctgtcaatcatgacagaggtTTAGCAAAGCTTATCCATGGCACGTGAACTTTAAGCGAAGCTAAATCTTACCTCGAATTATGTAGGCTAGCTTTCAGCAGCAGTTGTGTAatgtaacgtagagtgtaagaaGTGTTGCCAACCCTCAGCTAACGTCACAGTCAGATAGCACCCAACAGTCtacggctcctccctcactcctccctctcgtctaaaatcgtcacatcccaaccaggatggctgcgcccgtaacggcaaactcgacgactcatagcagatctccacaaaccaacgggtgacgtcacacatgctctgtccatttatattaacagtctatggtcataCCTTAGCACCAtcgctaatgttagcaattcattgcttttaaacaaagaaacagcaattatgtaaataaaaaattgacaattatgtaatcattgttacaggcctacttGAGACAATTCTGTCCACTCCTTCCTCTCATGTGGGGATGTGGTGGGATTATGGAGGTGATGGGAGGTCAGGCTGCAGTTTCAAGGTGCAATGGGCTGGTGTTCACAAAGCAGCTCTTAGTGACTACACAGTAAGTAGGACTGCTGTCGAGCCAGTCTGAACTTGTGGTTTTTTAATTGTCAGATGTACAAGATGGATGCTATCTGTACTCATGGAATAGTTTGGAGGACGAAATCAAATTgagtaaaaatgtcataaagtgtaaaattaaaatacaaatacatttttaaccaTAGCAGGACTCCTACTCCTCCATCCTTCCTTTACCCTCTGTGGGTTAATTATACTGTATACATCACAGTCTGATGCCCACACCAGAGTGTGTGATCTACTTTATGTATGACTGACCACTTGCACATCTATTTTTGACATGTGCTAAATATGGTCGTACAAGTTTATATTCTTAGTCCAGATTTTAAACCATGATGATGAGAAAAGTCATTAAAACTGTCAAAGGCCAAGCAAAAACTGTAGCCAGAGATCCAGCTTTGTGAAGACAGCTTTGGGTGTCTAACAGGGAGGGACAGTGGGGTTGACAACATTGGCTACCTCGTCCTCGTGAATGTCCTCCACCGTTGAGGACTGCGTGCTGAGGTTCGTGCTCGGGGCAGCGCCCTGGTTCTTCCTCCGGATTGAGCTACGCGATTCGTCAGTGATACTCTGAATctctctctccctctcggtCCTGGAAAGTTGCATCTGTTTCAGCATCTGAGACCTCTGCTCCATCACCAGTGTCTTCTCATAGGTGAAGGCTGAGATGTCGTTATCATGCATCTCCACCACTTCCACTTCTGCATCCAGTCGCAGGTGGTAAAGGAACACCTGGAGATCTTTCTTCATTTGGATGCTGTTGTCATCCATCTGGGCCACGGTGAAGATACGCATCTTACACTTCCTCCACACCTTGTGCTGTCGCAGCAGGAAGGGCAGCAGCATCAGCATGCCTCCATCGTGAACCACCCACCACACGTCGATGGTGCCCTCCGCTAAGCGCTCTTGGTTGGTGGGGAAACTGTCCACATTCTTGGCCACAAGCAAGGCATGATGGGTTGCTGTGGTCTCTCGCACCGTCTCTGGATGAatagaaggggagagagagagacagagagagagagagagagagagagagaaagagagagagaaaattgaAAAGAGAGGAACGTGTCTGTACACTACACATTGCCACCAGGACATCGGAACAGAATTGCATTTCTTATGTATTTTTCCCAAATATGAAGACTTAAGAAAcaaatatttcccaaaatattaaaactgggaacccggatagctcagttggtagtgcgcgcccatatatagaggtttactcctcgatgcagtggTCGCGGGTTCGAcctgaggccctttgctgcatgtcattc

Function

NR:

description
PREDICTED: solute carrier family 12 member 7-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294412 False 1724 lncRNA 0.42 3 2548630 2554324
TU294415 True 2452 lncRNA 0.44 5 2541535 2546714

Neighbor

gene id symbol gene type direction distance location
kcnh2b kcnh2,LOC102205662,LOC101467662 coding downstream 339875 1823043 ~ 2201660 (-)
ift74 ift74 coding downstream 1005345 1507736 ~ 1536190 (-)
LOC120551939 NA coding downstream 1209125 1321438 ~ 1332410 (-)
LOC120551945 NA coding downstream 1341325 1198609 ~ 1200210 (-)
vstm2a vstm2a coding downstream 2139709 294311 ~ 401826 (-)
zeb1b zeb1,LOC102790219 coding upstream 247242 2801566 ~ 2860283 (-)
map3k8 map3k8 coding upstream 658233 3212557 ~ 3220234 (-)
trnag-ucc_41 NA coding upstream 755175 3309499 ~ 3309570 (-)
LOC120552550 NA coding upstream 791432 3345756 ~ 3399840 (-)
cnn3a cnn3,LOC102798192 coding upstream 956448 3510772 ~ 3543793 (-)
G217522 LOC103361595,LOC103377102,LOC100706669 non-coding downstream 25890 2481005 ~ 2515645 (-)
LOC120552008 NA non-coding downstream 260347 2273323 ~ 2281188 (-)
LOC120552007 NA non-coding downstream 300658 2237870 ~ 2240877 (-)
G217445 NA non-coding downstream 331298 2210028 ~ 2210237 (-)
G217435 NA non-coding downstream 367979 2173300 ~ 2173556 (-)
G217520 gfod1,LOC101463621,LOC100711398,LOC102788772,LOC102233768,LOC106945177 non-coding upstream 56276 2610600 ~ 2621580 (-)
G217579 arhgap12 non-coding upstream 192462 2746786 ~ 2758060 (-)
G217584 NA non-coding upstream 207032 2761356 ~ 2769101 (-)
LOC120552330 NA non-coding upstream 389599 2943923 ~ 2968161 (-)
G217636 NA non-coding upstream 427474 2981798 ~ 2982010 (-)
scospondin sspo,LOC104950179 other downstream 122470 2214711 ~ 2419065 (-)
LOC120552169 LOC102294047,LOC102205018 other downstream 730405 1658172 ~ 1811130 (-)
si:dkey-225n22.4 LOC104949920,LOC103365391 other downstream 1093260 1355257 ~ 1448275 (-)
svila svil other upstream 434602 2988926 ~ 3136214 (-)
LOC120552696 NA other upstream 761094 3315418 ~ 3343705 (-)
f3a NA other upstream 883478 3437802 ~ 3456044 (-)
G217780 chchd7,LOC102799933 other upstream 1138628 3692952 ~ 3704357 (-)
G217837 NA other upstream 1381686 3936010 ~ 3941329 (-)

Expression


Co-expression Network