G217765


Basic Information

Item Value
gene id G217765
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 3658336 ~ 3660314 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU294755
ACACGCTCCCAACTGTTCAGCTAAACTGGATACTTTTGTATTTACAAATGATACATTTTAAGAACTAGAAAAGAGGTCTGTAGCACCTTTTTTTTAGGAGCTTTAGAAGTATGTTAGCAGCTTGATCCAATACcaaaaatatattgcagtattgcagtgttttcttttacataCACATTCAATAAACGTTCACTGGTACCACTGAAGCTTATCAAGAAGTTTGACATGAATTGCTAAAGGTCTGGGCCTCTCACTGAAGAGCATCTCCTGTCTCCATGGTCACCACACTGGAAACCTGTGGGagacatcccccccccccaccacacacacacacacagtttagcttAGCTTTAGAATGATGAACTTAACCTGATTGAGTGCGTTCCATTGGTACTCGGAAGACCTataggtcaaagtcggaaacacccCTCCCCGCTGAACTCTGATTTCCGAGCTCGGAAGTCAGACAACCTCTGAGTGCCTCGGGCTCAAAATCGAACATGGCTGCCCCTTGCaacaacagttgtgaaagctgtgcTAACCAGGGCTTCAAATGAACTTCTTTGCCAGCCAACACGGCTAGCAGATTAGTTACCAGCCAGTCATATTTTCCATCAGccacgtttgtttgttttctccgtaACTAACTTTACTTTACGGTTCGTCTTCTCCGTTTCGGCGTAGCTCGTAGTCGATACCGCACGCTAGGCGCGTAGCCGACAGTTGTACAGCACGTCACAGCATAAGtgtcatgggaaatgtaggattagaACTACAAGCAGCGTTGCCAGCTAAAGATTACGTTTCCAAGCCAAACGCACACAACACCGCCCACATTTCTTGGTGGAAAACGGACTAATCCTGCAACCTGACGCATGGTTTCTGCAGCCGGCCGATTCAAACAGACGCAGTGTTGTTCGCTTCATTCATCAACGGCCAAATTGGCTagtaactttacaatgttaCCCGACAAAGGTAATTTTCACCCGCATTTGGCGTGTTGGCCGGTGTCAATTTAAAGCTGTGGTAGTAACATTAAGTTATTAGCACTTCCGTCTTATTTGTCATACACACAGTCCTCTCCATATTCTATCAGTGgtgttgttacgctgtttgtatgcacaaaaaacggCGTAATGGATTGTTATCAACtggcattgctaacaatggctaacctggctagagctaaccccacaatgaaaaatccgacttgtaaatggaacgccttcaactcgggtgtgacgccattcccagctccggcttccgagttccgagttaaatggaacgcactaagATACCAGACTCCAAATCTGGATCTGCTTTCTCCAATGTGtagagattgtttttttttctttcaactttTTGATCCACAGTTTTTATCTTTTTCATTTATTCTCCCCAGATCAAATCCCTAGATTATTTCATACAATCCATACAGTATGAGTTATACATCGAGTTCAGACTGCAGTTCgctgattgaaaaaaaaaaattggttttCATCCAACAGCTTTTCAGGCAGAAACCACTAAGAAATCAAGTAATATGTTTTTCATATAATGTCACACTGAGGTCAAAGGATGATAGAGGAGGACAAAACCACCCTAGGAGttattaaacatacagtatatctttatgtttgtcGTTTTTAACAACTAATTTAACAACCAATGAAAAGATGATATAATTAAGTGCTATAAAATCTTCCATGTTAAGCTTCATTATTGGTTGTGCTCTCGCCTAAACCAGCGGTTGAATAGTCAAAGAAGGCCTTCTGAAATAGGCCAACAATAATCTGTGTTTAAGGTACattgtttgtcaaaaaaaaaaaaaaaaaactcaatgaGATACACAGAACACTTGTGCAAGTAAAGCAAAAATGACACTTTGATAGgaaaaaacactgtcaaaattgtacctgtaaaaataaaacattttatattgtatttacaTGTTATTGTTCTCTAAAAGAGCTAAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294755 True 1979 lncRNA 0.41 1 3658336 3660314

Neighbor

gene id symbol gene type direction distance location
steap2 steap2 coding upstream 20303 3570272 ~ 3638033 (+)
abcd3a abcd3 coding upstream 224715 3401968 ~ 3433621 (+)
jcada kiaa1462 coding upstream 351499 3282595 ~ 3306837 (+)
znf438 znf438,LOC104952784 coding upstream 722767 2878512 ~ 2935569 (+)
arhgap12b arhgap12 coding upstream 885650 2679636 ~ 2772686 (+)
arhgef4 arhgef4 coding downstream 53997 3714311 ~ 3873302 (+)
LOC120552545 NA coding downstream 240637 3900951 ~ 3935126 (+)
trnas-gcu_20 NA coding downstream 403680 4063994 ~ 4064075 (+)
LOC120552069 NA coding downstream 561595 4221909 ~ 4250306 (+)
LOC120552080 LOC107732049,LOC100535932 coding downstream 653037 4313351 ~ 4323124 (+)
G217761 NA non-coding upstream 11841 3646243 ~ 3646495 (+)
G217716 NA non-coding upstream 196688 3460771 ~ 3461648 (+)
trnas-aga_19 NA non-coding upstream 449658 3208597 ~ 3208678 (+)
trnas-aga_18 NA non-coding upstream 452700 3205555 ~ 3205636 (+)
trnaa-ugc_23 NA non-coding upstream 452968 3205297 ~ 3205368 (+)
G217768 NA non-coding downstream 4043 3664357 ~ 3664763 (+)
G217769 NA non-coding downstream 4547 3664861 ~ 3666493 (+)
LOC120552544 NA non-coding downstream 44710 3705024 ~ 3708719 (+)
G217788 NA non-coding downstream 166242 3826556 ~ 3827058 (+)
G217795 NA non-coding downstream 280482 3940796 ~ 3941325 (+)
G217723 cnn3 other upstream 114551 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 424514 3220615 ~ 3233822 (+)
G217606 svil other upstream 636694 3006283 ~ 3021642 (+)
G217377 NA other upstream 1982936 1669162 ~ 1675400 (+)
zcchc2 zcchc2 other upstream 2153121 1462750 ~ 1505215 (+)
chchd7 chchd7,LOC102799933 other downstream 10106 3670420 ~ 3704375 (+)
ppp1r17 NA other downstream 595734 4256048 ~ 4261598 (+)
trdmt1 LOC104946219,LOC101070638 other downstream 851399 4511713 ~ 4522706 (+)
LOC120552660 NA other downstream 3700292 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 4862985 8523299 ~ 8596356 (+)

Expression


Co-expression Network