G217818


Basic Information

Item Value
gene id G217818
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 3871733 ~ 3873634 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU294831
CCCTGACCTCGGAAAATCTaacttccgagtacaaatggaacgtcTCACAGTCATGTTGAACACAACACAAATGGAAAAGGAGGCATAGGGATTTGCTTTGTTAACGGCTAGGCTAACCTTTAGTAGCGGTGGTCTTTGTGGTTGTAATGAGGCCGGTTAGTTTAGCGTGTTGGTGACATAACGCAGACTTGATGAACTTTGACTGGACTGAAGTTAAAGCTGCAGCTGAGCTGATGACAaatgaaaatgcaataatCACCCCATACTGACGGTCACATTTGTCAGCTTAGGAATGTTTAATATTCCATATCGTCAGAAGCTAAAACATTTCAACACAAAGGTGAAAGGAGCACATTTCACTGAATGCACTTACAGAGCGATATCACTGGGCTGCATCGATCAGAAAGGAGATTATACTGGAGACCAGATACACAGAGCAGGAACACTGGCTATCAGAAGTACAGTAAAGGTagataaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgttgcTGTCAGCCTAGTAGCACGATGAAAACCTCAGTTCCTGAAGTCTGGTTAAATATAGCAGGGTTCTtcagagataaaaaaatattcttCACAGCATTTTTTCATCACATCCATGCATGTCATTGTAAGTCATCCGCGACACACTTCAaatggcactttaaaaaaaagaaagagagagagagagagagagagagagagagagagagagaaaaaagaacagGGTGTTTACTCTCATTGACATGGTAGGTAAAAGGAAGAGTCGAGGATCGGACTCGAGGAAtgtttgttgctgctgttttgcTTGAATAAAAAGCTCCTAATCTGCGCTGAGTagaatcttcttcttcttcttcttcttcttgcatttgatgaattatttaagtgtttcCACAATACGGAACTAAATCCTGGCGGATGGAGATCACAAAACACTTAAGAAAACCCCAGCTCAAATAAAATCCTGAAATTATATATTTGCACAGAGAAAAAGCACAggaaccccccacccccctttcaatgttcccctttttcttttttctttttcataaacagacacagatcaaacagatgtaaaaaaaaacaaaattgtctGGCACTGTGAACACTTGGCATCTGTGAAATcataaaacaacacaacagtGGAAAGAAGTGACAcaacttattattttttttttttgtcgttcaCAGAGGCGGCACAATCTGGAGTCCCACGCTCGCTCGCAGCAGTACAGCAGTAGTATTAGTACCAGTTGGCGCTTGATTGGAGgtgtagtagcagtagcagtaagTTAAGCAAGAGTCCACTCGCCCTGTTTGACTCAGTGTCTCCGGGGGAGACCGTTCTCAGGTCTGATTGTTAACCAACCTATAAAGTGctttcgaaaaaattatctcgTCCTCATCATAATCATCCTCATCTATGCAATAAATCAGTGTTTCAATAAGGGCAATGTTACAtgtaggaaaagaaaaagagattaATTAAAAAGGGTCTATTCAGGCACGAGCAGAGAGcgcttctctttctctgtccccccccctcccctctgttCCTTCGCTCCACGgctttttctttcacttcagGATTTTCTCTCCTTCACTTCTTGAAAGGTGTCAGTCGGCCGATGTTGTGCCAGAAGGTGGAGGTTTTGCGCTTGGGCTCAGCCAGCATGAACACCTGCTGCTGGGGCAAGGCGGTGGGGAGGGACGGGTGTTTCTGTCGCAGGAGGAAGTCGTAGTAAGGTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294831 True 1787 lncRNA 0.43 3 3871733 3873634

Neighbor

gene id symbol gene type direction distance location
plag1 plag1,LOC102799649 coding downstream 179125 3669151 ~ 3692608 (-)
mos mos coding downstream 227183 3642390 ~ 3644550 (-)
trnar-ucu_66 NA coding downstream 249112 3622524 ~ 3622621 (-)
trnar-ucu_65 NA coding downstream 250126 3621510 ~ 3621607 (-)
trnar-ucu_64 NA coding downstream 250498 3621138 ~ 3621235 (-)
LOC120552547 LOC104953016,LOC108234711 coding upstream 14984 3888618 ~ 3901023 (-)
LOC120552072 LOC101479525,LOC102293327 coding upstream 134265 4007899 ~ 4050666 (-)
cubn cubn coding upstream 193160 4066794 ~ 4160555 (-)
LOC120552076 NA coding upstream 292443 4166077 ~ 4176543 (-)
neurod6a LOC107736131 coding upstream 320211 4193845 ~ 4197469 (-)
G217817 NA non-coding downstream 27251 3844143 ~ 3844482 (-)
G217815 NA non-coding downstream 44680 3826554 ~ 3827053 (-)
G217799 NA non-coding downstream 144897 3726524 ~ 3726836 (-)
G217778 NA non-coding downstream 204817 3666645 ~ 3666916 (-)
G217770 NA non-coding downstream 207855 3660520 ~ 3663878 (-)
G217828 NA non-coding upstream 30473 3904107 ~ 3904552 (-)
G217884 NA non-coding upstream 305062 4178696 ~ 4178918 (-)
G217905 NA non-coding upstream 388992 4262626 ~ 4262932 (-)
G217935 NA non-coding upstream 592349 4465983 ~ 4466440 (-)
G217960 NA non-coding upstream 691996 4565630 ~ 4566156 (-)
G217780 chchd7,LOC102799933 other downstream 167376 3692952 ~ 3704357 (-)
f3a NA other downstream 415689 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 528028 3315418 ~ 3343705 (-)
svila svil other downstream 735519 2988926 ~ 3136214 (-)
scospondin sspo,LOC104950179 other downstream 1452668 2214711 ~ 2419065 (-)
G217837 NA other upstream 62376 3936010 ~ 3941329 (-)
G218019 NA other upstream 1153871 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 1826595 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 4321295 8194929 ~ 8195879 (-)
G218471 NA other upstream 4556830 8430464 ~ 8430930 (-)

Expression


Co-expression Network