ppp1r17


Basic Information

Item Value
gene id ppp1r17
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4256048 ~ 4261598 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU294946
ATAACCCAGAGGGACACCGCTCCAGCCCGTCAGTCTGACACTGCTGAGACTGAGATAGCCCCGAGGGCCTCAGAGATGACGACTGGCTGTATGAGGTCGACCCTGGAGCCTGAACAGCGACTGATGACACAGGAGAGCAAACACTGAGGCGCAGGAGAGCCTGGTGGACAGGAAGTCAGAGATGAAGGACGATGAAGAGGAGGCCCTTTGCGCACAGAATCAGGAGGCAGATCAGAAGAAGAAACCTCGCAGAAAAGACACACCTGTCCTCAACTCTCATCCACATATACCAGGACTGAGACTGCTGAAAGCAGAGAAGCAGATGGTCCACTCAGAAGATGAGGAGAAAGATTTGAAGGaataaagactttatttagccTCCCTTTTATTATGTTGTCAATAAATGTTCACA
>XM_039789754.1
GAGAGAGGATGCTCCTCCTCCAAGCATTATAACCCAGAGGGACACCGCTCCAGCCCGTCAGTCTGACACTGCTGAGACTGAGATAGCCCCGAGGGCCTCAGAGATGACGACTGGCTGTATGAGGTCGACCCTGGAGCCTGAACAGCGACTGATGACACAGGAGAGCAAACACTACAAGGAGGCGCAGGAGAGCCTGGTGGACAGGAAGTCAGAGATGAAGGACGATGAAGAGGAGGCCCTTTGCGCACAGAATCAGGAGGCAGATCAGAAGAAGAAACCTCGCAGAAAAGACACACCTGTCCTCAACTCTCATCCACATATACCAGGACTGAGACTGCTGAAAGCAGAGAAGCAGATGGTCCACTCAGAAGATGAGGAGAAAGATTTGAAGGaataaagactttatttagccTCCCTTTTA

Function

NR:

description
protein phosphatase 1 regulatory subunit 17

GO: NA

KEGG:

id description
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU294946 False 412 lncRNA 0.50 4 4256076 4261598
XM_039789754.1 True 421 mRNA 0.52 4 4256048 4261574

Neighbor

gene id symbol gene type direction distance location
LOC120552069 NA coding upstream 5742 4221909 ~ 4250306 (+)
trnas-gcu_20 NA coding upstream 191973 4063994 ~ 4064075 (+)
LOC120552545 NA coding upstream 320922 3900951 ~ 3935126 (+)
arhgef4 arhgef4 coding upstream 382746 3714311 ~ 3873302 (+)
steap2 steap2 coding upstream 618015 3570272 ~ 3638033 (+)
LOC120552080 LOC107732049,LOC100535932 coding downstream 51753 4313351 ~ 4323124 (+)
trnaa-cgc_15 NA coding downstream 131906 4393504 ~ 4393576 (+)
trnas-gcu_24 NA coding downstream 149282 4410880 ~ 4410962 (+)
trnas-gcu_25 NA coding downstream 150952 4412550 ~ 4412631 (+)
trnas-gcu_26 NA coding downstream 153324 4414922 ~ 4415003 (+)
G217795 NA non-coding upstream 314723 3940796 ~ 3941325 (+)
G217788 NA non-coding upstream 428990 3826556 ~ 3827058 (+)
LOC120552544 NA non-coding upstream 547329 3705024 ~ 3708719 (+)
G217769 NA non-coding upstream 589555 3664861 ~ 3666493 (+)
G217768 NA non-coding upstream 591285 3664357 ~ 3664763 (+)
G217925 NA non-coding downstream 141451 4403049 ~ 4403369 (+)
G217927 NA non-coding downstream 174825 4436423 ~ 4436735 (+)
G217956 NA non-coding downstream 261996 4523594 ~ 4523896 (+)
G217969 NA non-coding downstream 393667 4655265 ~ 4655474 (+)
G217964 NA non-coding downstream 498022 4759620 ~ 4762250 (+)
chchd7 chchd7,LOC102799933 other upstream 551673 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 712263 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1022226 3220615 ~ 3233822 (+)
G217606 svil other upstream 1234406 3006283 ~ 3021642 (+)
G217377 NA other upstream 2580648 1669162 ~ 1675400 (+)
trdmt1 LOC104946219,LOC101070638 other downstream 250115 4511713 ~ 4522706 (+)
LOC120552660 NA other downstream 3099008 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 4261701 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 4289185 8550783 ~ 8606578 (+)
G218445 NA other downstream 4294618 8556216 ~ 8557253 (+)

Expression


Co-expression Network