G217935


Basic Information

Item Value
gene id G217935
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4465983 ~ 4466440 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU294982
GCTccgtttgtttacatgatgctgggcgTGCCCGCCTCTGTCACAGATACTGTATCAGGCGCATCTACTGACGCAACAATGTTTGGAAAATTTTAATGAAtgccggaatgttgtgtggactagccagaccctcctccacagcgctgtggaggaaggtctggcaatgccagactacacattgccagacctatctgcacagcattccaggatgggaggaaaacatgctctagtttattggcatttctttaaaccaatcacaatcgtcatgggcggtgctaagcgccggacggagccacggtgcctctgctaaatagcctcgggaaggaacttgttttggtggaacgtgtacgttcaaaagttgttttagtcatgcgagagaaaactctgattggacagatagtctagctagctggatttaccctgcagagatctgaggagcagttaaccatagtcctcac

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU294982 True 458 lncRNA 0.49 1 4465983 4466440

Neighbor

gene id symbol gene type direction distance location
c1ql3a c1ql3,LOC102786996 coding downstream 10454 4433632 ~ 4455529 (-)
trnas-gcu_30 NA coding downstream 39603 4426299 ~ 4426380 (-)
trnas-gcu_29 NA coding downstream 41283 4424619 ~ 4424700 (-)
trnas-gcu_28 NA coding downstream 43829 4422073 ~ 4422154 (-)
trnas-gcu_23 NA coding downstream 59760 4406142 ~ 4406223 (-)
rsu1 rsu1,LOC102787280 coding upstream 411 4466851 ~ 4510609 (-)
LOC120552074 NA coding upstream 58861 4525301 ~ 4532240 (-)
LOC120552070 plppr4,LOC102778844 coding upstream 103977 4570417 ~ 4613727 (-)
trnas-gcu_31 NA coding upstream 331041 4797481 ~ 4797562 (-)
trnas-gcu_32 NA coding upstream 332550 4798990 ~ 4799071 (-)
G217905 NA non-coding downstream 203051 4262626 ~ 4262932 (-)
G217884 NA non-coding downstream 287065 4178696 ~ 4178918 (-)
G217828 NA non-coding downstream 561431 3904107 ~ 3904552 (-)
G217818 NA non-coding downstream 592349 3871733 ~ 3873634 (-)
G217817 NA non-coding downstream 621501 3844143 ~ 3844482 (-)
G217960 NA non-coding upstream 99190 4565630 ~ 4566156 (-)
G217971 NA non-coding upstream 152176 4618616 ~ 4618865 (-)
G217976 NA non-coding upstream 293825 4760265 ~ 4762269 (-)
G217977 NA non-coding upstream 319953 4786393 ~ 4786618 (-)
G217988 NA non-coding upstream 423872 4890312 ~ 4890528 (-)
G217837 NA other downstream 524654 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 761626 3692952 ~ 3704357 (-)
f3a NA other downstream 1009939 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 1122278 3315418 ~ 3343705 (-)
svila svil other downstream 1329769 2988926 ~ 3136214 (-)
G218019 NA other upstream 561065 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 1233789 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 3728489 8194929 ~ 8195879 (-)
G218471 NA other upstream 3964024 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 4331341 8797781 ~ 8851726 (-)

Expression


Co-expression Network