G217964


Basic Information

Item Value
gene id G217964
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4759620 ~ 4762250 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU295015
tacaatgtaaaatattaagtttacagcttgtataacagtggaaatgtgctgtcccctcagaataactcaacacacagccattaatgtctaaactgctGGCTACAAAAggcagtacacccctatgttaaattcccatagagacaggaagatgtttatttttaatggccagttatttcatggatccaggatactatgcatcctgataaagttcccttggcctttggaattaaaatagcccccccacatcatcacataccctttcacgatacctagagattgacatggttttatgtcggttagcctaatagctggtttgatttgcattgagagatgattttatggaaagtaccccatgccaatctctaggtatggtgaagggtatgtgatgatgtggggctaagctgtacacttaatactttacattgtagcaaagtgtaatttcttcagtgttgtcccattaaaagatataatgaaatatttactaaaatgtgaggggtgtactcacttttgtgagatactgtgtatatatatagtcgccagaccttcctccacagtactgcggaggaaggtctgtctagtccacacagcattctggatgggagaaaaacatgctctggtttattggcatttctttaaaccaatcacaatcgtcttgggcggtgctaagcaccagatggagccacggttcctctgcaaaatagcctccggaaggaacttgttttggtggaacgtgtacgttttaAAAGTAgctttagtcatgcaacagaaaactcagattgaacagatagtctagctcgctgtctggatttaccctgcagagatctgaggagcagttaaccatagtcctcagaaatccaccggagtttagaacggcaacacaaagaaagaggaaggggacggacatccagcggaacctccggcggcaccggagcaatcccctaAATTTCCGTTGTCAATATAGACTAATATAGATAAACCTTGGGGTTAAGGTTCCAATCATCCAAAAGTCCCTGGTTGCATGTCGTTCCCCACCTCTCTCCCCTAATTCATGTTATCTCTCtaataaagattgttttaaaaataCTCTGTATATTTTAGAAACTAAAACAGTGCTTAGCTCTTCTAATGTAATTGTAATACATGAAACTGGGGCAAGCTATTGGCAGACAGATAAAGCAACTCATTGGTAATCAGCGGAGCAGATACTTCCCTCCCGAGTTGGTGGAGGTcaaaccagagctaaaaggagagagaatattggactattgttttgatgtttttttctgccttCTCGTGGCccaaaattaattaatgcaGCTCCAAAGGCCCTTTTCAGTTAatgtggctgattagacctcttcccaggcctgtgtgggtgtgtagaGACTGATTGAGTTAACATCTTCCTGAGACTCTTGTTAGCTTTGTTGCACCCGAGAGGTCAGGACAATCACAGCTTcatcattcttattggtagaaaagatgtgtgacctaataaattcccatctaagctccggcccaccttcaacctgagcagaggtctaatcagacagaataactgaaatcacctgtgtgggtgttcacaGGCTTTATCTGGTCCATCACTTGATTGATTTTTCATCTACAAATCTACAATTTTCATGCATAACGAACATGAATGCTGGTGATAAATGGACACACGTGTATTTGCATTGTATCAAATTCAAAGTCGCGTCACTCGTGTGTACTAAGCCATTCTTCTTTGTAGCAATAACATGTCAGTCTTTCTTTCCCATCAGGAGAGAGGAACGCGTTGAAGATCTAATTCCGTTGCCCCTTCAAATATCTATTTTTGTAAGAATTACTGAAGCACTTATGACTAAGGACTCCAGGCAGGAACATGCAAAGCGCAGCACTTTAAATCAAGCTGTAACTCCTCTCATTGCTAATGAAACGGCCACCCATGTCACAGCTGCTTGAAAACAAATATTGCACAGAATATTCAGGACtctaaaaaagcaaaacaaatatGCTCATATGTGCATCGCAAGAGCTACTCCACTAtcctagtatatatatatatatatatatatatatataaaaagagaacTGATACTTTTGGTCATATTCCAATTTCACTGCTGTCTATTTTCTTATGACTGTGCACTGTGTGAGTGTTCACGATAAATGTCTATTTTATTCCTCAGATAGCTGTTATTGCTTCTTTATGTCATGTTACTGAAATGAGGTATATTTCAAGTTACTGTTCAAAAttatagttacattttttgtacCCTGTTTTGTGACTAGTGACATTCATGTTTGTTATGTTGATATTTATGTTCCCTACCTTGCTGTGTATGTCGCAGCTTCCCTTAATTGAGCTTCTTCTGAGACAAATGTTACAAACCTTTCTGAActtgccacacacacatacacacacacacacacacacacagtcatgtgATTTCTTTGCTTCTAGTGGAACATTTTGTATGGATGTTGTTGCTCTTCTACTATCCCAGTTTATAGTATTcatgtttctttttcaaatgtttcttctttttcaacTTGATTTCAAATTGTGACCTTTTACACTGTAgaacatgataaaaaaaatgtacagccttgaataaaaaacattaaaagaga
>TU295016
tacaatgtaaaatattaagtttacagcttgtataacagtggaaatgtgctgtcccctcagaataactcaacacacagccattaatgtctaaactgctGGCTACAAAAggcagtacacccctatgttaaattcccatagagacaggaagatgtttatttttaatggccagttatttcatggatccaggatactatgcatcctgataaagttcccttggcctttggaattaaaatagcccccccacatcatcacataccctttcacgatacctagagattgacatggttttatgtcggttagcctaatagctggtttgatttgcattgagagatgattttatggaaagtaccccatgccaatctctaggtatggtgaagggtatgtgatgatgtggggctaagctgtacacttaatactttacattgtagcaaagtgtaatttcttcagtgttgtcccattaaaagatataatgaaatatttactaaaatgtgaggggtgtactcacttttgtgagatactgtgtatatatatagtcgccagaccttcctccacagtactgcggaggaaggtctgtctagtccacacagcattctggatgggagaaaaacatgctctggtttattggcatttctttaaaccaatcacaatcgtcttgggcggtgctaagcaccagatggagccacggttcctctgcaaaatagcctccggaaggaacttgttttggtggaacgtgtacgttttaAAAGTAgctttagtcatgcaacagaaaactcagattgaacagatagtctagctcgctgtctggatttaccctgcagagatctgaggagcagttaaccatagtcctcagaaatccaccggagtttagaacggcaacacaaagaaagaggaaggggacggacatccagcggaacctccggcggcaccggagcaatcccctaAATTTCCGTTGTCAATATAGACTAATATAGATAAACCTTGGGGTTAAGGTTCCAATCATCCAAAAGTCCCTGGTTGCATGTCGTTCCCCACCTCTCTCCCCTAATTCATGTTATCTCTCtaataaagattgttttaaaaataCTCTGTATATTTTAGAAACTAAAACAGTGCTTAGCTCTTCTAATGTAATTGTAATACATGAAACTGGGGCAAGCTATTGGCAGACAGATAAAGCAACTCATTGGTAATCAGCGGAGCAGATACTTCCCTCCCGAGTTGGTGGAGGTcaaaccagagctaaaaggagagagaatattggactattgttttgatgtttttttctgccttCTCGTGGCccaaaattaattaatgcaGCTCCAAAGGCCCTTTTCAGTTAatgtggctgattagacctcttcccaggcctgtgtgggtgtgtagaGACTGATTGAGTTAACATCTTCCTGAGACTCTTGTTAGCTTTGTTGCACCCGAGAGGTCAGGACAATCACAGCTTcatcattcttattggtagaaaagatgtgtgacctaataaattcccatctaagctccggcccaccttcaacctgagcagaggtctaatcagacagaataactgaaatcacctgtgtgggtgttcacaGGCTTTATCTGGTCCATCACTTGATTGATTTTTCATCTACAAATCTACAATTTTCATGCATAACGAACATGAATGCTGGTGATAAATGGACACACGTGTATTTGCATTGTATCAAATTCAAAGTCGCGTCACTCGTGTGTACTAAGCCATTCTTCTTTGTAGCAATAACATGTCAGTCTTTCTTTCCCATCAGGAGAGAGGAACGCGTTGAAGATCTAATTCCGTTGCCCCTTCAAATATCTATTTTTGTAAGAATTACTGAAGCACTTATGACTAAGGACTCCAGGCAGGAACATGCAAAGCGCAGCACTTTAAATCAAGCTGTAACTCCTCTCATTGCTAATGAAACGGCCACCCATGTCACAGCTGCTTGAAAACAAATATTGCACAGAATATTCAGGACtctaaaaaagcaaaacaaatatGCTCATATGTGCATCGCAAGAGCTACTCCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295015 True 2631 lncRNA 0.39 1 4759620 4762250
TU295016 False 2042 lncRNA 0.41 1 4759620 4761661

Neighbor

gene id symbol gene type direction distance location
plppr5b plppr5,LOC102778366 coding upstream 2803 4618639 ~ 4756817 (+)
trnas-gcu_27 NA coding upstream 340447 4419092 ~ 4419173 (+)
trnas-gcu_26 NA coding upstream 344617 4414922 ~ 4415003 (+)
trnas-gcu_25 NA coding upstream 346989 4412550 ~ 4412631 (+)
trnas-gcu_24 NA coding upstream 348658 4410880 ~ 4410962 (+)
trnaa-agc_24 NA coding downstream 36925 4799175 ~ 4799247 (+)
trnaa-agc_25 NA coding downstream 42981 4805231 ~ 4805303 (+)
trnaa-agc_26 NA coding downstream 44390 4806640 ~ 4806712 (+)
trnas-gcu_36 NA coding downstream 47674 4809924 ~ 4810007 (+)
trnas-gcu_37 NA coding downstream 50301 4812551 ~ 4812632 (+)
G217969 NA non-coding upstream 104146 4655265 ~ 4655474 (+)
G217956 NA non-coding upstream 235724 4523594 ~ 4523896 (+)
G217927 NA non-coding upstream 322885 4436423 ~ 4436735 (+)
G217925 NA non-coding upstream 356251 4403049 ~ 4403369 (+)
G217795 NA non-coding upstream 818295 3940796 ~ 3941325 (+)
G218012 NA non-coding downstream 193823 4956073 ~ 4956401 (+)
G218023 NA non-coding downstream 440337 5202587 ~ 5202896 (+)
G218025 NA non-coding downstream 471540 5233790 ~ 5234090 (+)
G218026 NA non-coding downstream 485045 5247295 ~ 5247686 (+)
G218031 NA non-coding downstream 659724 5421974 ~ 5422348 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 236914 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 498022 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 1055245 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 1215835 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1525798 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 2598356 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 3761049 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 3788533 8550783 ~ 8606578 (+)
G218445 NA other downstream 3793966 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 4449668 9211918 ~ 9230163 (+)

Expression


Co-expression Network