G217969



Basic Information


Item Value
gene id G217969
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4655265 ~ 4655474 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU295021
accactaaggtctatataaaagagacttcagatacagtattaggggaccactaagatctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagactacagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagcatc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU295021 True 210 lncRNA 0.37 1 4655265 4655474

Neighbor


gene id symbol gene type direction distance location
trnas-gcu_27 NA coding upstream 236092 4419092 ~ 4419173 (+)
trnas-gcu_26 NA coding upstream 240262 4414922 ~ 4415003 (+)
trnas-gcu_25 NA coding upstream 242634 4412550 ~ 4412631 (+)
trnas-gcu_24 NA coding upstream 244303 4410880 ~ 4410962 (+)
trnaa-cgc_15 NA coding upstream 261689 4393504 ~ 4393576 (+)
trnaa-agc_24 NA coding downstream 143701 4799175 ~ 4799247 (+)
trnaa-agc_25 NA coding downstream 149757 4805231 ~ 4805303 (+)
trnaa-agc_26 NA coding downstream 151166 4806640 ~ 4806712 (+)
trnas-gcu_36 NA coding downstream 154450 4809924 ~ 4810007 (+)
trnas-gcu_37 NA coding downstream 157077 4812551 ~ 4812632 (+)
G217956 NA non-coding upstream 131369 4523594 ~ 4523896 (+)
G217927 NA non-coding upstream 218530 4436423 ~ 4436735 (+)
G217925 NA non-coding upstream 251896 4403049 ~ 4403369 (+)
G217795 NA non-coding upstream 713940 3940796 ~ 3941325 (+)
G217788 NA non-coding upstream 828207 3826556 ~ 3827058 (+)
G217964 NA non-coding downstream 104146 4759620 ~ 4762250 (+)
G218012 NA non-coding downstream 300599 4956073 ~ 4956401 (+)
G218023 NA non-coding downstream 547113 5202587 ~ 5202896 (+)
G218025 NA non-coding downstream 578316 5233790 ~ 5234090 (+)
G218026 NA non-coding downstream 591821 5247295 ~ 5247686 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 132559 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 393667 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 950890 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 1111480 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1421443 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 2705132 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 3867825 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 3895309 8550783 ~ 8606578 (+)
G218445 NA other downstream 3900742 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 4556444 9211918 ~ 9230163 (+)

Expression



Co-expression Network