G218117


Basic Information

Item Value
gene id G218117
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 5927203 ~ 5946142 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU295218
TTGTTAGGCAGAGAGCAGATCGACTACACAGACAGGAAGGTCAAACACTCACATCACCAGCAAACCCACCAGAGAAGATGGAAACACTCCCACagatgggcacacacacacacatttgtatacagtatgggaCATAATCCTCATGCAAAGACATCACTGCCAGAGAAATAGGCATGTATGCTGTCTGGAATTATTGGATGTACTGTACACCTTTACCACCAGGTGTCATTGTTAGCCAAGTCTAACACGGGGCTTTGTCATAGCTTTGCCTAAAAGTAACATATGGAGCTCTGATTGGACTAAACCATGTCCCCTGTCTAATGTGCTTTAGTCTGCTGATGTTAACTTTAATTTTGTAAACATCATTTTAAAAATCAACTAAATAAAAGTAATCATGTTAGCGTGTGCATTTGTGGATCTAATCATGTCTACCAGTGAAATACTTCAAATGATGCTTTCCATTATTTGTGTAAGTATAAACCGGACGATACATAGGTTTCATGTCTGATCACCGAGCTGGTGAATGTGACAGATGTGTGACTTCACGGCTGGTTTTCTACATCACAGCAGCGCTAGGTTCATTAAAGGGCGAAGAGAGGAGCCACGGGGAGGCATTAGTCGGGGAATGAAACAGGATCAGCACATGTGCTGGAGAAGGTTTAAGAGGCCAACACCCAATGCTTTGAAGGCCGATGCGAGCTGCTACATGAAAGCTAACAAGCTAGCGTGGAGTGGTCTCAGTGGAAACGTTAAAACCTTTAATATCAATTGTAGACACTTGTCTTATTTGGGataagggggggtggggggtagtACCGTTTCTGTGTTGCTTTGTCCAATAAACTTCTATCATTTGTAAATGAACTGCTGGAAACTGAATGTATGATTGCTACTTGGCTTTAAAAGTCAAACTGAAATGAATAATCAATGTTTAAAATTTTTTTGATTTGCCCCTTGTTTGATTTCAGCCCTCCCTATGTGACTCCATATGTCACTCTGGTATAGACTGGACTTTAAAGAGAGACAGCTAACATTAAACGTTATATATTGCGGATCCAACACAACACTGCATGTGCACGAGCTGCAGTTGACTCAGCAGATGCTGAAATCACATGAccaaaaagtaatagtctagTGGGAATCAGTGCGTTAACCAGCCAGGCTAACTAGCTTCCACTTGTCGAGTGGAATTCAACTTATCGGCACAGCCAGTGTTGTGAGAAACAGGAGATAATGATTAATCCAGTAGCAAACACTATATGGACTTCTTACAGGGCAAACAAAGGCTTTGTACTCAGATCAATCACTGCTATGGAAAACCCTAACCAGAGGCTACATCCAAAAAGGGTTCTAAAAAATGACTTgaaaaatgggaaaatgtcCACAATATCTGAAGTATCTGTATAGTTTATATTTCCttgcacaaaaagtaaggagaACTCCAATGTTAGTCTGACTTAACAGCTGATATATTGGTTAGCTTCACACAAGTCTGGCAATCTTCAAACTCGCACTAAGTTAGTTTAGACTTCTATATGAAATGAAAGAGCCCATGTGACATGTACAAATACAGGAAGAGGAAAGCACTACATTGACAGGATATGAGGCACCAAGAGCCAGTTACAGAGCATGCAGAGGCATAGAAACACCAACCAGCTTCAGCTCTCGCcgcaccccctccccccctccccttcttcCTTGGCCTGGGTGCAATGCTATTAAAGGCTGAGGGTTGGAGTGGGTTCTCTCTTGTGTCCATGCCAGGAAGAGACAGGGAGGGTCCATGTCTCTGCCCCAACACACGTCCACCTTCAAGAAGAGAAATATCCACAACGCTGTCTTCTTCAGTCCAGCCACGGCTTTAATTTTCATCATTCAGTAGTTAATCTTGCCTTTATCCGTTTGCATACAATTTTAGTTTCACAAACCAAGCCATAGGTTTActctaacaaacaaacaattgcACTCACTCTGCTCAGTTCTTCATTTTCAGTGTAATCGCTCACTACTTACTCATGACCAAGGTTGAAAGCTGCAtcacaaatactgtacatcctTGGCCAGCTTTCGAGCAAAGACTCAAACATTTTGTCCCCCTCCCCGTCCCCGTCCCCTTCATCCTCTGTCCCATCAGTTGGCAGGTTCAAAGTTCAAAGGCAGGGAAGCAGGAGGCTTCAGGCTTTTCCATCTCTG
>TU295219
CTGATCACCGAGCTGGTGAATGTGACAGATGTGTGACTTCACGGCTGGTTTTCTACATCACAGCAGCGCTAGGTTCATTAAAGGGCGAAGAGAGGAGCCACGGGGAGGCATTAGTCGGGGAATGAAACAGGATCAGCACATGTGCTGGAGAAGGTTTAAGAGGCCAACACCCAATGCTTTGAAGGCCGATGCGAGCTGCTACATGAAAGCTAACAAGCTAGCGTGGAGTGGTCTCAGTGGAAACGTTAAAACCTTTAATATCAATTGTAGACACTTGTCTTATTTGGGataagggggggtggggggtagtACCGTTTCTGTGTTGCTTTGTCCAATAAACTTCTATCATTTGTAAATGAACTGCTGGAAACTGAATGTATGATTGCTACTTGGCTTTAAAAGTCAAACTGAAATGAATAATCAATGTTTAAAATTTTTTTGATTTGCCCCTTGTTTGATTTCAGCCCTCCCTATGTGACTCCATATGTCACTCTGGTATAGACTGGACTTTAAAGAGAGACAGCTAACATTAAACGTTATATATTGCGGATCCAACACAACACTGCATGTGCACGAGCTGCAGTTGACTCAGCAGATGCTGAAATCACATGAccaaaaagtaatagtctagTGGGAATCAGTGCGTTAACCAGCCAGGCTAACTAGCTTCCACTTGTCGAGTGGAATTCAACTTATCGGCACAGCCAGTGTTGTGAGAAACAGGAGATAATGATTAATCCAGTAGCAAACACTATATGGACTTCTTACAGGGCAAACAAAGGCTTTGTACTCAGATCAATCACTGCTATGGAAAACCCTAACCAGAGGCTACATCCAAAAAGGGTTCTAAAAAATGACTTgaaaaatgggaaaatgtcCACAATATCTGAAGTATCTGTATAGTTTATATTTCCttgcacaaaaagtaaggagaACTCCAATGTTAGTCTGACTTAACAGCTGATATATTGGTTAGCTTCACACAAGTCTGGCAATCTTCAAACTCGCACTAAGTTAGTTTAGACTTCTATATGAAATGAAAGAGCCCATGTGACATGTACAAATACAGGAAGAGGAAAGCACTACATTGACAGGATATGAGGCACCAAGAGCCAGTTACAGAGCATGCAGAGGCATAGAAACACCAACCAGCTTCAGCTCTCGCcgcaccccctccccccctccccttcttcCTTGGCCTGGGTGCAATGCTATTAAAGGCTGAGGGTTGGAGTGGGTTCTCTCTTGTGTCCATGCCAGGAAGAGACAGGGAGGGTCCATGTCTCTGCCCCAACACACGTCCACCTTCAAGAAGAGAAATATCCACAACGCTGTCTTCTTCAGTCCAGCCACGGCTTTAATTTTCATCATTCAGTAGTTAATCTTGCCTTTATCCGTTTGCATACAATTTTAGTTTCACAAACCAAGCCATAGGTTTActctaacaaacaaacaattgcACTCACTCTGCTCAGTTCTTCATTTTCAGTGTAATCGCTCACTACTTACTCATGACCAAGGTTGAAAGCTGCAtcacaaatactgtacatcctTGGCCAGCTTTCGAGCAAAGACTCAAACATTTTGTCCCCCTCCCCGTCCCCGTCCCCTTCATCCTCTGTCCCATCAGTTGGCAGGTTCAAAGTTCAAAGGCAGGGAAGCAGGAGGCTTCAGGCTTTTCCATCTCTG
>TU295221
cagacacacacacacacacacacacacacgttgttaGGCAGAGAGCAGATCGACTACACAGACAGGAAGGTCAAACACTCACATCACCAGCAAACCCACCAGAGAAGATGGAAACACTCCCACagatgggcacacacacacacatttgtatacagtatgggaCATAATCCTCATGCAAAGACATCACTGCCAGAGAAATAGGCATGTATGCTGTCTGGAATTATTGGATGTACTGTACACCTTTACCACCAGGTGTCATTGTTAGCCAAGTCTAACACGGGGCTTTGTCATAGCTTTGCCTAAAAGTAACATATGGAGCTCTGATTGGACTAAACCATGTCCCCTGTCTAATGTGCTTTAGTCTGCTGATGTTAACTTTAATTTTGTAAACATCATTTTAAAAATCAACTAAATAAAAGTAATCATGTTAGCGTGTGCATTTGTGGATCTAATCATGTCTACCAGTGAAATACTTCAAATGATGCTTTCCATTATTTGTGTAAGTATAAACCGGACGATACATAGGTTTCATGTCTGATCACCGAGCTGGTGAATGTGACAGATGTGTGACTTCACGGCTGGTTTTCTACATCACAGCAGCGCTAGGTTCATTAAAGGGCGAAGAGAGGAGCCACGGGGAGGCATTAGTCGGGGAATGAAACAGGATCAGCACATGTGCTGGAGAAGGTTTAAGAGGCCAACACCCAATGCTTTGAAGGCCGATGCGAGCTGCTACATGAAAGCTAACAAGCTAGCGTGGAGTGGTCTCAGTGGAAACGTTAAAACCTTTAATATCAATTGTAGACACTTGTCTTATTTGGGataagggggggtggggggtagtACCGTTTCTGTGTTGCTTTGTCCAATAAACTTCTATCATTTGTAAATGAACTGCTGGAAACTGAATGTATGATTGCTACTTGGCTTTAAAAGTCAAACTGAAATGAATAATCAATGTTTAAAATTTTTTTGATTTGCCCCTTGTTTGATTTCAGCCCTCCCTATGTGACTCCATATGTCACTCTGGTATAGACTGGACTTTAAAGAGAGACAGCTAACATTAAACGTTATATATTGCGGATCCAACACAACACTGCATGTGCACGAGCTGCAGTTGACTCAGCAGATGCTGAAATCACATGAccaaaaagtaatagtctagTGGGAATCAGTGCGTTAACCAGCCAGGCTAACTAGCTTCCACTTGTCGAGTGGAATTCAACTTATCGGCACAGCCAGTGTTGTGAGAAACAGGAGATAATGATTAATCCAGTAGCAAACACTATATGGACTTCTTACAGGGCAAACAAAGGCTTTGTACTCAGATCAATCACTGCTATGGAAAACCCTAACCAGAGGCTACATCCAAAAAGGGTTCTAAAAAATGACTTgaaaaatgggaaaatgtcCACAATATCTGAAGTATCTGTATAGTTTATATTTCCttgcacaaaaagtaaggagaACTCCAATGTTAGTCTGACTTAACAGCTGATATATTGGTTAGCTTCACACAAGTCTGGCAATCTTCAAACTCGCACTAAGTTAGTTTAGACTTCTATATGAAATGAAAGAGCCCATGTGACATGTACAAATACAGGAAGAGGAAAGCACTACATTGACAGGATATGAGGCACCAAGAGCCAGTTACAGAGCATGCAGAGGCATAGAAACACCAACCAGCTTCAGCTCTCGCcgcaccccctccccccctccccttcttcCTTGGCCTGGGTGCAATGCTATTAAAGGCTGAGGGTTGGAGTGGGTTCTCTCTTGTGTCCATGCCAGGAAGAGACAGGGAGGGTCCATGTCTCTGCCCCAACACACGTCCACCTTCAAGAAGAGAAATATCCACAACGCTGTCTTCTTCAGTCCAGCCACGGCTTTAATTTTCATCATTCAGTAGTTAATCTTGCCTTTATCCGTTTGCATACAATTTTAGTTTCACAAACCAAGCCATAGGTTTActctaacaaacaaacaattgcACTCACTCTGCTCAGTTCTTCATTTTCAGTGTAATCGCTCACTACTTACTCATGACCAAGGTTGAAAGCTGCAtcacaaatactgtacatcctTGGCCAGCTTTCGAGCAAAGACTCAAACATTTTGTCCCCCTCCCCGTCCCCGTCCCCTTCATCCTCTGTCCCATCAGTTGGCAGGTTCAAAGTTCAAAGGCAGGGAAGCAGGAGGCTTCAGGCTTTTCCATCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295218 False 2193 lncRNA 0.43 2 5927203 5932031
TU295219 False 1689 lncRNA 0.44 2 5927203 5931574
TU295221 True 2223 lncRNA 0.43 2 5927203 5946142

Neighbor

gene id symbol gene type direction distance location
LOC120552212 LOC102200884,LOC107389439,LOC103367775 coding downstream 78806 5847441 ~ 5848397 (-)
LOC120552519 LOC104935677,LOC103364245 coding downstream 197947 5724235 ~ 5729256 (-)
snx7 snx7 coding downstream 972224 4899955 ~ 4954979 (-)
trnas-gcu_51 NA coding downstream 1057598 4869524 ~ 4869605 (-)
trnas-gcu_50 NA coding downstream 1059033 4868089 ~ 4868170 (-)
LOC120552249 hecw1 coding upstream 25052 5971194 ~ 6064050 (-)
bambia bambi,LOC102792619 coding upstream 289713 6235855 ~ 6240971 (-)
waca wac coding upstream 301280 6247422 ~ 6277304 (-)
LOC120552351 LOC103377033,LOC108245190,LOC101477525 coding upstream 680447 6626589 ~ 6639687 (-)
itgb1a itgb1,LOC104924090 coding upstream 694576 6640718 ~ 6683933 (-)
G218092 NA non-coding downstream 22707 5804267 ~ 5904496 (-)
LOC120552294 NA non-coding downstream 105304 5806423 ~ 5821899 (-)
G218099 NA non-coding downstream 123747 5803246 ~ 5803456 (-)
G218098 NA non-coding downstream 125175 5801626 ~ 5802028 (-)
G218096 NA non-coding downstream 127481 5799443 ~ 5799722 (-)
G218165 NA non-coding upstream 42747 5988889 ~ 5989930 (-)
G218166 NA non-coding upstream 64195 6010337 ~ 6011065 (-)
G218176 NA non-coding upstream 282633 6228775 ~ 6228993 (-)
G218177 NA non-coding upstream 307004 6253146 ~ 6253976 (-)
G218199 NA non-coding upstream 479866 6426008 ~ 6454966 (-)
G218085 LOC107687935 other downstream 226627 5700229 ~ 5700576 (-)
G218019 NA other downstream 890499 5027505 ~ 5036704 (-)
G217837 NA other downstream 1985874 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 2222846 3692952 ~ 3704357 (-)
f3a NA other downstream 2471159 3437802 ~ 3456044 (-)
G218453 adarb2 other upstream 2248787 8194929 ~ 8195879 (-)
G218471 NA other upstream 2484322 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 2851639 8797781 ~ 8851726 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other upstream 3011267 8957409 ~ 8970638 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 3887320 9833462 ~ 9848241 (-)

Expression


Co-expression Network