G218232


Basic Information

Item Value
gene id G218232
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 6580571 ~ 6629017 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU295363
GCGccgaaggggggtggggggggggggggggggagacaggCGGACCTCCCCTCCACTGCCTTCATGTCTGATGAGGAAGCTCAGCTCAGGAACCCCagtgggaggggaggggggctgttctttcaagtgtgtttgtgtgtatgcttgtgtggCACTGTGTGTGGTATTCACATGTATGTTTGAACACATGCTTTTGagcgcgtgtgtttgtgtgttgtctaGACCAGGGAGCAGTAGCCACCGCAGCCTCCACCTCCGGCGTCCTCGTCGCTGAGCTGGACTCCTCGGCCGTGGCTCTCGCTCTGCCATAAGCCGGGCGTCTGGATTATCTTCTCCACCAGCTCCTCAAATGCACACTGAACACCGTCTCTGGTCTTGGCACTCGCCTCTGGAAGAACGGAGTGTAGaagggaaaaataaaaaggaagaaagaatgGAGAGTGAAGGGACGGGCAGatacagaggagaggagagaggcaaaAAGGAGTGAGGAAAAccaagaaataaagaaaaatgaagAGAAGTGGACAAACAGAGAAGGAGGAACAGAAGATGGGATACAGATGCAACAGCTGTTAATGTCTGCACCTTGATGTCATCATCTGCTGGGCTCCCAGAGCGCAGGGGCGGGGGGGTGGAAAATGTCTCAACAATAACTGTCAACCCTAGGCACTAGTAGTGAACCATAGGAGGTTATTAGGGGGTATTGTCAGCACCCGCTACACAACAGGACGATATCCAGAAACATTACAATAACAACAAGCAAAGGATAAAGAAATCAATCTTCGCCGAGTCAGAATTAATATATTAGGGTATGTATTGGGGAACTTGGAAACATCAGTAATCTTTTCATTTCAACAAACGTTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295363 True 871 lncRNA 0.50 2 6580571 6629017

Neighbor

gene id symbol gene type direction distance location
odad2 armc4,LOC104966301,LOC108229284 coding upstream 31307 6482474 ~ 6549264 (+)
mpp7a mpp7,LOC106534949 coding upstream 126558 6280602 ~ 6454013 (+)
vopp1 vopp1 coding upstream 631719 5934020 ~ 5948852 (+)
lancl2 lancl2 coding upstream 651962 5909877 ~ 5928609 (+)
tgfbr1b tgfbr1,LOC103376883,LOC102779975,LOC108248259 coding upstream 684805 5854640 ~ 5895766 (+)
trnaw-cca_30 NA coding downstream 652689 7281706 ~ 7281777 (+)
trnaw-cca_31 NA coding downstream 660213 7289230 ~ 7289301 (+)
ccny ccny,LOC106511473 coding downstream 746481 7375498 ~ 7418872 (+)
LOC120551990 gjd4 coding downstream 797370 7426387 ~ 7429609 (+)
klf6a klf6,LOC104927255,LOC104952265 coding downstream 1130095 7759112 ~ 7763854 (+)
G218190 NA non-coding upstream 131368 6448148 ~ 6449203 (+)
G218155 NA non-coding upstream 321959 6250738 ~ 6258612 (+)
G218150 NA non-coding upstream 351595 6228775 ~ 6228976 (+)
G218141 NA non-coding upstream 494922 6085064 ~ 6085649 (+)
G218083 NA non-coding upstream 626217 5953109 ~ 5954354 (+)
G218241 itgb1,LOC104924090 non-coding downstream 11747 6640764 ~ 6648434 (+)
G218240 LOC104924090 non-coding downstream 20784 6649801 ~ 6717709 (+)
G218244 LOC104924090,LOC103366961 non-coding downstream 28804 6657821 ~ 6660277 (+)
G218270 NA non-coding downstream 322271 6951288 ~ 7008758 (+)
G218272 pard3 non-coding downstream 403912 7032929 ~ 7033231 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 2057865 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 2318973 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 2876196 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 3036786 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 3346749 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 731589 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 1894282 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 1921766 8550783 ~ 8606578 (+)
G218445 NA other downstream 1927199 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 2582901 9211918 ~ 9230163 (+)

Expression


Co-expression Network