G218453 (adarb2)


Basic Information

Item Value
gene id G218453
gene name adarb2
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8194929 ~ 8195879 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU295672
CTGGGGTAAATGAGGACAGCTCTTCCTGCTGGCTTTGAGGCCTGTCCTCCCCTCGGGGGCTGTCCTGATGTTGAAGAGGGCCTGAAGGGCACACTGGGCCGCCTGGGTCTTGGCCAACTTCTTGCTGCGACCGCAGCCCTCAAATATCTGCCCGTCCACGCGCACCGCCATCACGAAGCTACGCAGCCGCCGGCCTTCAGCTCGCTCCGAGAGGCAGGCATAGCGAAGACCCGGCCGGAGCTCATTGAGCAACGCCACGGAACTCTTGGCGGCCTCTGGCTCCGGAACAATCCCTCCTAGCCTCTGCTGAGCCTGCACCATCAGGTCCAAGGTATGGCGAAGCAACCGTCCATGTCTCAGCAGCTCACTTGACAGTAGCTCGCTCTCTGCCGCCGCGTTGCAGAGCGAGAGGCCATCGGAGCACGGCGAAGACTCAAATTCCTTGAAGAGCGTGTCAGGGAAGTCCGCCTGATCCGAGGTGAAGTCAGCCGAAGGGTTTGAGATGTTTCCCATGGCCAGGTGGGCCTGAGGAGCGTTGGGGAACTGGACGAAGGACTTGAGCGCCAGCTCGGCAGCCCTCATCTTCGCTTTCTTCTTTGTGGGGCCCGTGCCCTCGAAGGTCAGCCCGTTCACCTCCACAGCGATGGCGAAGACAGGAGCGTGGACAGGGCCCGTCTGAGACACCATGCGGTACTGCAGGCCCGGCCTGAGCTCATTCAGCTGCACCAAAGCATTCTTTGGTGCTTCAGACCAGGACAGTTTTTTATAGATCAGGCGGAGTTGACACAAGTGGCCGTTGTTTTCCTCCTCTAGCGGCCGTTTCCTCTTCAGACCGGAGCTGCCACTTCTCGCAGAGTCGGAGCAGAAAAGCGACTGGCACTCCGCAGACCCTATGGAGCGATCCTCTAAGTTGCCAATGTTACGGTTTTCCTTTACCTCAGCACTGCTGGT

Function

symbol description
adarb2 Predicted to enable double-stranded RNA adenosine deaminase activity; double-stranded RNA binding activity; and tRNA-specific adenosine deaminase activity. Predicted to be involved in RNA processing and adenosine to inosine editing. Predicted to be active in cytoplasm and nucleolus. Is expressed in brain and spinal cord. Orthologous to human ADARB2 (adenosine deaminase RNA specific B2 (inactive)).

NR:

description
PREDICTED: double-stranded RNA-specific editase B2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295672 True 951 TUCP 0.60 1 8194929 8195879

Neighbor

gene id symbol gene type direction distance location
pfkpa LOC101472402,LOC100702375,LOC102201923,LOC102790125,LOC104924699 coding downstream 305930 7861932 ~ 7888999 (-)
fzd8a fzd8,LOC104927254,LOC104956203 coding downstream 752230 7439940 ~ 7442699 (-)
cul2 cul2,LOC102787920 coding downstream 834841 7343067 ~ 7360088 (-)
trnaw-cca_34 NA coding downstream 853034 7341824 ~ 7341895 (-)
LOC120552354 pard3 coding downstream 859477 6952829 ~ 7335452 (-)
LOC120552408 wdr37,LOC102292542,LOC101470374 coding upstream 107944 8303823 ~ 8326855 (-)
LOC120552407 cpne3,LOC104924704,LOC102292005,LOC108248831 coding upstream 138908 8334787 ~ 8347251 (-)
LOC120552411 LOC103369038,LOC104941959,LOC108248835 coding upstream 152077 8347956 ~ 8361373 (-)
LOC120552414 LOC101468454,LOC102290369,LOC102196333,LOC103482264,LOC106914574 coding upstream 167595 8363474 ~ 8372337 (-)
LOC120552161 wwp1 coding upstream 182140 8378019 ~ 8417988 (-)
G218450 NA non-coding downstream 137831 8056690 ~ 8057098 (-)
G218368 NA non-coding downstream 428532 7763500 ~ 7766397 (-)
LOC120552532 NA non-coding downstream 448497 7744835 ~ 7746432 (-)
G218349 NA non-coding downstream 451604 7742973 ~ 7743325 (-)
G218347 NA non-coding downstream 454405 7740273 ~ 7740524 (-)
G218454 NA non-coding upstream 6556 8202435 ~ 8202636 (-)
G218455 NA non-coding upstream 7501 8203380 ~ 8204520 (-)
G218473 NA non-coding upstream 239170 8435049 ~ 8435949 (-)
G218477 NA non-coding upstream 263619 8459498 ~ 8459710 (-)
G218469 NA non-coding upstream 327071 8522950 ~ 8533544 (-)
G218085 LOC107687935 other downstream 2494353 5700229 ~ 5700576 (-)
G218019 NA other downstream 3158225 5027505 ~ 5036704 (-)
G217837 NA other downstream 4253600 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 4490572 3692952 ~ 3704357 (-)
f3a NA other downstream 4738885 3437802 ~ 3456044 (-)
G218471 NA other upstream 234585 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 601902 8797781 ~ 8851726 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other upstream 761530 8957409 ~ 8970638 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 1637583 9833462 ~ 9848241 (-)
G218950 NA other upstream 2381520 10577399 ~ 10669527 (-)

Expression


Co-expression Network