G218522


Basic Information

Item Value
gene id G218522
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8634100 ~ 8634685 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU295764
ggccTTACAGCGATCAAGCTTTATAAAATTAGATGCaattgttcctcttttaaacacatacacagttcTCTTCATAAGTAACAATCAAGTAATGCTAAAGTGTGTAGTATCTCTTTTACTTTTCCCCAAAGGAGTACTTTGCTTTTGTCTCactttaaatgtttaataatCATCAGCATGCACGCACACCATCACCCCATGCGACACTTATTCTTTACAAAGAGGGGAAGGGGTGAGAATGGCAAAGAACgtaacagagaggaagagagagaagtggAGAGACAAAACCAAGAGGTGAGAAAAGAGAAGTTAGCTCGGGAAAggggtgaaaacaatgaaaagcgCACATCCAATCAACAGAGAGGAGTGATGGCTTAGGGCAACCGTAGTGTAAGCAAGTGTTTGATGCTTGTTGACAGCTGTATCTGTgaggtgggggagagagagagagcgtgtgtgtgcgtttgtgtgcagACCAAGACTTATAATCCTATACCATGCAAGGTTGCGTGACCGTTCATACCCAACTCTTTGCTGCTTTGCACACCATTTGCCCTAATTGGTTACAcccactctctcactcaca

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0031589 cell-substrate adhesion biological_process
GO:0030902 hindbrain development biological_process
GO:0007160 cell-matrix adhesion biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295764 True 586 lncRNA 0.43 1 8634100 8634685

Neighbor

gene id symbol gene type direction distance location
snx16 snx16 coding downstream 136086 8476127 ~ 8498014 (-)
LOC120552161 wwp1 coding downstream 216112 8378019 ~ 8417988 (-)
LOC120552414 LOC101468454,LOC102290369,LOC102196333,LOC103482264,LOC106914574 coding downstream 261763 8363474 ~ 8372337 (-)
LOC120552411 LOC103369038,LOC104941959,LOC108248835 coding downstream 272727 8347956 ~ 8361373 (-)
LOC120552407 cpne3,LOC104924704,LOC102292005,LOC108248831 coding downstream 286849 8334787 ~ 8347251 (-)
LOC120552041 ahrr coding upstream 4856 8639541 ~ 8712753 (-)
LOC120552044 anks6 coding upstream 89764 8724449 ~ 8734819 (-)
ncf2 ncf2 coding upstream 133535 8768220 ~ 8779822 (-)
olfm3a olfm3,LOC103369880,LOC108250954 coding upstream 394438 9029123 ~ 9083108 (-)
col11a1a col11a1,LOC103148006 coding upstream 452466 9087151 ~ 9173024 (-)
G218503 NA non-coding downstream 37696 8547773 ~ 8596404 (-)
G218469 NA non-coding downstream 100556 8522950 ~ 8533544 (-)
G218477 NA non-coding downstream 174390 8459498 ~ 8459710 (-)
G218473 NA non-coding downstream 198151 8435049 ~ 8435949 (-)
G218455 NA non-coding downstream 429580 8203380 ~ 8204520 (-)
G218561 NA non-coding upstream 102459 8737144 ~ 8739902 (-)
G218563 NA non-coding upstream 109162 8743847 ~ 8744309 (-)
G218568 NA non-coding upstream 114908 8749593 ~ 8750452 (-)
G218571 LOC102785356,LOC102298937,LOC101486668,LOC102080962,LOC102192826 non-coding upstream 118826 8753511 ~ 8754861 (-)
G218587 NA non-coding upstream 155143 8789828 ~ 8791965 (-)
G218471 NA other downstream 203170 8430464 ~ 8430930 (-)
G218453 adarb2 other downstream 438221 8194929 ~ 8195879 (-)
G218085 LOC107687935 other downstream 2933524 5700229 ~ 5700576 (-)
G218019 NA other downstream 3597396 5027505 ~ 5036704 (-)
G217837 NA other downstream 4692771 3936010 ~ 3941329 (-)
prkdc prkdc other upstream 163096 8797781 ~ 8851726 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other upstream 322724 8957409 ~ 8970638 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 1198777 9833462 ~ 9848241 (-)
G218950 NA other upstream 1942714 10577399 ~ 10669527 (-)
LOC120552013 NA other upstream 1969635 10604320 ~ 10615221 (-)

Expression


Co-expression Network