G218561


Basic Information

Item Value
gene id G218561
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8737144 ~ 8739902 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU295812
TTTccttattcatttctttattgaaTCATCTGCATCATTTATGCATCTGCGATGGTAACCTCAACCTCTACACCGGGCTCAATGCTGATGGAGGTGATCTGCTTGACGATTTCAGATGGGCTGTGCAGATCAATCAGGCGCTTGTGGATCCTCATCTGGAAGCGATCCCAGGTTTTGGATCCTTCACCACAAGGTGTTTTCCTGGTGGTGATACGCAGAGTTTGGTTGGCATGCGGACAGGTCCCTTCACCTTCAGGTTCTTCTCCTTAGCCCCACGGATCAGGTCTGCGGAGATTTGACGTTGCGGCTGGTGAGGGTGATGCGGATGCGGTGAATGGCGACCTCAGTCTCAACAGGTGCCTTGCCAGTGTCCTTGAAAGCATTTTGATTATTCCTGACCGACTTATTCGGGAGAAATTCAAGCGAACAGCGGTGAGCCAGGAACAGGAGCCACAAACGTGGTTAGCTCTTCAGGAAAAGAGCGAGCAGAGGCTAGTTTCCT

Function

NR:

description
CKLF-like MARVEL transmembrane domain-containing protein 6

GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295812 True 502 lncRNA 0.50 4 8737144 8739902

Neighbor

gene id symbol gene type direction distance location
LOC120552044 anks6 coding downstream 2325 8724449 ~ 8734819 (-)
LOC120552041 ahrr coding downstream 24391 8639541 ~ 8712753 (-)
snx16 snx16 coding downstream 239130 8476127 ~ 8498014 (-)
LOC120552161 wwp1 coding downstream 319156 8378019 ~ 8417988 (-)
LOC120552414 LOC101468454,LOC102290369,LOC102196333,LOC103482264,LOC106914574 coding downstream 364807 8363474 ~ 8372337 (-)
ncf2 ncf2 coding upstream 28318 8768220 ~ 8779822 (-)
olfm3a olfm3,LOC103369880,LOC108250954 coding upstream 289221 9029123 ~ 9083108 (-)
col11a1a col11a1,LOC103148006 coding upstream 347249 9087151 ~ 9173024 (-)
LOC120552183 vav3,LOC102780841 coding upstream 874938 9614840 ~ 9726073 (-)
nrros NA coding upstream 1027690 9767592 ~ 9777716 (-)
G218522 NA non-coding downstream 102459 8634100 ~ 8634685 (-)
G218503 NA non-coding downstream 140740 8547773 ~ 8596404 (-)
G218469 NA non-coding downstream 203600 8522950 ~ 8533544 (-)
G218477 NA non-coding downstream 277434 8459498 ~ 8459710 (-)
G218473 NA non-coding downstream 301195 8435049 ~ 8435949 (-)
G218563 NA non-coding upstream 3945 8743847 ~ 8744309 (-)
G218568 NA non-coding upstream 9691 8749593 ~ 8750452 (-)
G218571 LOC102785356,LOC102298937,LOC101486668,LOC102080962,LOC102192826 non-coding upstream 13609 8753511 ~ 8754861 (-)
G218587 NA non-coding upstream 49926 8789828 ~ 8791965 (-)
G218588 NA non-coding upstream 56595 8796497 ~ 8796699 (-)
G218471 NA other downstream 306214 8430464 ~ 8430930 (-)
G218453 adarb2 other downstream 541265 8194929 ~ 8195879 (-)
G218085 LOC107687935 other downstream 3036568 5700229 ~ 5700576 (-)
G218019 NA other downstream 3700440 5027505 ~ 5036704 (-)
G217837 NA other downstream 4795815 3936010 ~ 3941329 (-)
prkdc prkdc other upstream 57879 8797781 ~ 8851726 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other upstream 217507 8957409 ~ 8970638 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 1093560 9833462 ~ 9848241 (-)
G218950 NA other upstream 1837497 10577399 ~ 10669527 (-)
LOC120552013 NA other upstream 1864418 10604320 ~ 10615221 (-)

Expression


Co-expression Network