ipo4 (ipo4,LOC102785023)


Basic Information

Item Value
gene id ipo4
gene name ipo4,LOC102785023
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 10703138 ~ 10719314 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU296360
TGTTACTTActtattttcctttttcaggTTGTGCAGCTAATGAAGCCCATAGTTGCTGCTTCCAGTCATGTCCTTGGCAACAAGAATGTTGATGAAGAAACCCAGAACACTTTGGCCATGCTGATAAAACAATTTGCCCAGCAGCACTCTGCAGACTTCCAAAAAGCTGTGACCTCACTTCCTGGAGAGCAGCAGGCCAAACTCAGTGTCGCCATCTCTGCCTCGTAGCCCACACACATCCTTCCACTCTTGTGTAATAGCCAGCCAAAACCATACATTTTTATACTGTAGGTAGAAAATGGGACAGTTCTTTGTGGTGTAAATGATCTAAGCACTTCAAGCATTCTACTAGTTATTATCACATTTTGCAGTTATGCCTCTAAGTAttaacttttaatttatttgctTAAACACATGCTATGTtgaagttttattattttaagagTTATGTACTGTTTACCATCCTGTATTGTTAgcattgtattttgttttcctGTTATTTCTAGAATGTGCCACTATGAATTGCTACTGTCCCATTTCTGCCACTGTTTGGACTGACTTCTGGCTTTGCTATCTGAGTGTAAAGCAATGAATTTGATCGCCtg
>TU296361
TGTGGTTTCTCAtcattgtgtgtatttggtccATGGACTTGGACACCAATCTTAAACATTGTTACTTActtattttcctttttcaggTTGTGCAGCTAATGAAGCCCATAGTTGCTGCTTCCAGTCATGTCCTTGGCAACAAGAATGTTGATGAAGAAACCCAGAACACTTTGGCCATGCTGATAAAACAATTTGCCCAGCAGCACTCTGCAGACTTCCAAAAAGCTGTGACCTCACTTCCTGGAGAGCAGCAGGCCAAACTCAGTGTCGCCATCTCTGCCTCGTAGCCCACACACATCCTTCCACTCTTGTGTAATAGCCAGCCAAAACCATACATTTTTATACTGTAGGTAGAAAATGGGACAGTTCTTTGTGGTGTAAATGATCTAAGCACTTCAAGCATTCTACTAGTTATTATCACATTTTGCAGTTATGCCTCTAAGTAttaacttttaatttatttgctTAAACACATGCTATGTtgaagttttattattttaagagTTATGTACTGTTTACCATCCTGTATTGTTAgcattgtattttgttttcctGTTATTTCTAGAATGTGCCACTATGAATTGCTACTGTCCCATTTCTGCCACTGTTTGGACTGACTTCTGGCTTTGCTATCTGAGTGTAAAGCAATGAATTTGATCGCCtg
>XM_039790926.1
CAGCAGGTCCCTTTAACTCAACTCACATGGAACTCCTGGCCGGTTCTGCTCCGCGTGCTGGCAGTTGAAGCCTAAACGGACCAGACCGAGCTAGGGGGTTCGAATCTGTCAGACTCTCCTTTTCGGCTTGATAGCTTCATACGTATCCGACTTTTttaaaagagattttttttttttttacagcaaatttggtagctagctagctataagACCTACCCAGAGAGGCTCTCTTTACATATTTGACAGCTGTAACATACTTGGGACACCGTTGGTAACCACAACACAGAAGGACAACTCGTTTATCTAAACCGGTTAATTAGAAATAGTACCGCTAACGGTCACAACAGGTTAACTAAAGGTGGTAACGTTTGTTCTGAGCTGTCAAGATGACCGAGGAACTTGAGCGAATTCTTTTACAGCTGACACAGCCCGATAATGCTGCCAttcagcagGCCACCGCCCAGCTGAAACAGGCTTTCAAAGACCCAGCCATTATACCAGCACTATGTGCTGTCATGAGTGGCTCCCAAAACCCTCAGATTCGTCAGTCAGCTGCAGTGATGCTGAGGATGAGAGTGAAGAAACACTGGAAAAAAATTATCCCTAATGATAGAGAAAGCCTTAAGGCGGTGGTGCTGCAGGCCTTCATGCAGGAAACAGAGCACACAGTGCAGCATTCACTCTCCCAACTGTGCGCAGTTATGGTCAAACATGAAACACCAGACCGCTGGCCTGCCCTGCTGCAGTTTCTCAATCAATCCACCAAGAGCAGCAACCCTCATGAACGACAGGTTGGCCTCCTGCTGCTGAATAAGGTGATGGAGTCCAATCCTGAGCCTTTCAAGCCTCACTACTGCCAGCTGCTACAGCTGTTTAGTACTGTACTGCAGGACCACAACAACCCGACAGCTTTGTACTACTGCATCCTCGCCCTTACAGCCATTACTGCATACACTGGCTCAGAAGAGATGAACCTGATGCGTTCTATCATCCCAAATCTGATTGTCGCTTTGAAACACCTCATCAAGGCAGATCAGGGCCAAGCCAGCGAGGCCATGGAGGTGTTTAATGAGCTCATGGAGAGTGAGGTGTCCATCATCGTCCCTCATGTTTCTGAGATTGTCCGCTTCTGCTTGGAGGTGGGCAGTGACACCACACTGAGTGACTCTCTGCGGGTGAAAGCACTCTCTTGTATTGCCTTCCTCATCAAGCTGAAGAGCAAGACGGTGCTGAAGCAGAAGCTGCTGAACCCCATCCTGCAGACCATTTTCCCTGTGCTGATTGCAGCTCCCCCACCTGGGGAGCATGACccagaggatgaggaggatgacAGCGGAGACGGCACAGACAATGACAATCCCAAACACTGTGCTGCTCAGATAATTGACACTATGGCCCTCCATATGCCCCCAGAGAAACTGTTTCAACAACTGATGCCTCTTGCCAAGACCTGCCTTGCCAGTGACAAAAAGGCTATGAACTTGTGTGTTAGCGCCGTTTTAACTTCACCTTTTATATCTGTCGATGTTAGGTTGCTGTCGTCAATGCTGCAGACAGTGTGCCAGAGTCTCTCTGACAGTAATCAGGTGGTGCGCAGTGCCGGCCTTTTTGCCCTGGGACAGTTCTCTGAACATTTACAGCCTGAAGTGAGCAAGTACTGTGCAGAGTTGATGCCTTTGTTGCTGGGTTACCTTTCGTCCTTGAACCAGGCCAAGGTTGGTCATGTCACCAAGGCCTTTTATGCCCTGGAGAACTTCATGGAGAACCTagGAGCAGATATTGAACCCTACCTGCCCACACTCATGGAAACTATGTTGTCTGCCCTTAACAACACGGAAAACCTCAAGATAAAAGAGCTTGCTGTGTCTGCTATAGGTGCCATAGCCAATGCCGCCAAGGAGCTGCTGGTTCCCTACTTCCCTCCAGTTATTGAAAGCCTGAAGGGCTTCCTGACTACCACCACAGAGGAAATGAGGTCTCTGCAAACTCAGTCCTTGGaTACACTCTCTGTGCTGGCCCGTACCATTGGCAAAGATGTCTTCAGTCCTCTTGCTGCAGAGTGTGTTCGTTTGGGCCTCAACCTCACCGACACCATTGATGACCCTGACTTGAGACGCTGCACGTACAGTCTCTACTCTGCTGTATCCACAGTCAGCCCGGACTGCCTGACTCCTCACCTCCCGGCCATTACAACAGTCATGCTGCTCGCCCTCAAGTCCAATGAAGGCATTACGGCCCACATTGAGGAGGACAAGACATTTGTCCTGCtggatgatgatgacgatgatgacgATAACGAAGGACAAAAAGATACAGATGAATTTCTGGAAGATGAGCCGGAGACAGATATCCATGATGTTGCAGGGTTCAGTGTGGAAAACGCCTACATCGATGAGAAGGAGGATGCCTGTGATGCACTGGGAGAGATTGCATTCAGCACTGGTGCTGCCTTCCAGCCCTTCTTGGAGTCCAGCTTTCAGCAGGTTTACGAGATGAGAGATTTTCCCCACGAGGATGTCCGCAGGGCAGCATTCGGAGCCATGGGCCAGTTTTGTCGAGCTCAGCATCAAGTGTGGAAGGAGAATCCCAGCGAGACCAACCACCAGGccctacTGAAGTTGCTGGATGTGGTGCTTCCCTGCTTCGTGGAAACAGTGCGAACGGAGCATGAGCGCCAGGTTGTGATGGGTGTTCTGGAAACCATGAACAATGTCATAAAGTCGTGCAAGGAGGAGGCTTTCAAAAACCCTCAACGTCTAAAGGAGATCAGCCATGTCATCCGTGATGTGCTcaagaaaaagACCGTTTGTcaggatggtggtggtggtgatgaagcTGACGATGAAGACCAACAGGCAGAGTATGATGCTATGCTCCAGGAGTTTGCCGGGGAGGGAATTCCTCTGCTGGCCTCTTCTGTGCCTGCAGACAACTTTGCCCCTTTCCTCAATGACCTGCTGCCTCTCCTCATGAGTAAAGCTAAATCCACATGCACCGTGGCTGACCGGTCCTTCTCTGTGGGTACCATTGGAGAAATCCTGCAGTCCCTTATGAGCGTGTCCGGGGGCCAGGGAGTGGCAGGCCGGCTGTCCAATCGTTTGCTTCCCGTGCTGGTGGCTGGAGTGAGGGACAGTGATCCAGAGGTTCGCAACAACAGCGTGTTTGGACTGGGATGTCTTGCCCAGGCAACTGGACCCATCTGTGTATCAGACTATCCCATGATGCTGTCTGTGTTTTCCAACATGCTGACCAAAGAGTCAGACCTCAGGGTGATTGACAACCTGTGTGCCGCGCTCTGCAGGATGATCATGAGCAATGTGGATGCTGTCCCTCTGGAGCAGTTGTGGTTTCTCAtcattgtgtgtatttggtccATGGACTTGGACACCAATCTTAAACATTGTTACTTActtattttcctttttcaggTTGTGCAGCTAATGAAGCCCATAGTTGCTGCTTCCAGTCATGTCCTTGGCAACAAGAATGTTGATGAAGAAACCCAGAACACTTTGGCCATGCTGATAAAACAATTTGCCCAGCAGCACTCTGCAGACTTCCAAAAAGCTGTGACCTCACTTCCTGGAGAGCAGCAGGCCAAACTCAGTGTCGCCATCTCTGCCTCGTAGCCCACACACATCCTTCCACTCTTGTGTAATAGCCAGCCAAAACCATACATTTTTATACTGTAGGTAGAAAATGGGACAGTTCTTTGTGGTGTAAATGATCTAAGCACTTCAAGCATTCTACTAGTTATTATCACATTTTGCAGTTATGCCTCTAAGTAttaacttttaatttatttgctTAAACACATGCTATGTtgaagttttattattttaagagTTATGTACTGTTTACCATCCTGTATTGTTAgcattgtattttgttttcctGTTATTTCTAGAATGTGCCACTATGAATTGCTACTGTCCCATTTCTGCCACTGTTTGGACTGACTTCTGGCTTTGCTATCTGAGTGTAAAGCAATGAATTTGATCGCCtgataaatgtaattttttgttCCAA

Function

symbol description
ipo4 Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytoplasm and nucleus. Orthologous to human IPO4 (importin 4).

NR:

description
PREDICTED: importin-4

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K20221 IPO4, RANBP4; importin-4

RNA

RNA id representative length rna type GC content exon number start site end site
TU296360 False 605 lncRNA 0.39 2 10718412 10719291
TU296361 False 664 lncRNA 0.39 2 10718353 10719291
XM_039790926.1 True 4029 mRNA 0.49 29 10703138 10719314

Neighbor

gene id symbol gene type direction distance location
tm9sf1 tm9sf1 coding upstream 7529 10686028 ~ 10695609 (+)
pck2 pck2,LOC104953087 coding upstream 147830 10542337 ~ 10555308 (+)
LOC120552103 NA coding upstream 172461 10527522 ~ 10530677 (+)
thtpa thtpa coding upstream 190836 10508133 ~ 10512302 (+)
ngdn ngdn,LOC103482313 coding upstream 229518 10464346 ~ 10473620 (+)
pdcd6 pdcd6 coding downstream 25364 10744678 ~ 10769201 (+)
bmp6 bmp6,LOC102783604 coding downstream 69531 10788845 ~ 10835044 (+)
plcxd2 LOC103354532,LOC100692427 coding downstream 638243 11357557 ~ 11368065 (+)
LOC120552213 tmem56,LOC103482516,LOC104925854,LOC107094156 coding downstream 706640 11425954 ~ 11445755 (+)
bco1 bco1,LOC108244032,LOC100692880 coding downstream 731779 11451093 ~ 11456575 (+)
G218908 NA non-coding upstream 38355 10632987 ~ 10664783 (+)
G218910 NA non-coding upstream 43699 10640646 ~ 10659439 (+)
G218899 NA non-coding upstream 103337 10591619 ~ 10599801 (+)
G218896 NA non-coding upstream 119788 10577399 ~ 10583350 (+)
G218892 NA non-coding upstream 140027 10557880 ~ 10563111 (+)
G219046 NA non-coding downstream 155735 10875049 ~ 10946088 (+)
LOC120552466 NA non-coding downstream 237294 10956608 ~ 10969329 (+)
G219099 NA non-coding downstream 659323 11378637 ~ 11477907 (+)
LOC120552242 NA non-coding downstream 763954 11483268 ~ 11486685 (+)
G219141 NA non-coding downstream 775142 11494456 ~ 11494655 (+)
dcaf11 dcaf11 other upstream 176934 10516450 ~ 10526204 (+)
G218875 pabpn1 other upstream 208150 10488267 ~ 10494988 (+)
G218848 LOC103365363 other upstream 279889 10422586 ~ 10423249 (+)
G218695 NA other upstream 1244438 9458183 ~ 9458700 (+)
G218694 LOC106675555,LOC106675866,LOC106674541,LOC106099046 other upstream 1324991 9376944 ~ 9378147 (+)
zgc:101569 LOC102309791,LOC106455900,LOC102784166,LOC100695384,LOC101475816,LOC106931939 other downstream 50061 10769375 ~ 10815975 (+)
tmem14ca LOC104958612,LOC101162485 other downstream 621013 11340327 ~ 11342705 (+)
G219081 NA other downstream 627868 11347182 ~ 11348405 (+)
phldb2b LOC104958614,LOC100693428,LOC103354549,LOC108244019,LOC101481236,LOC102301890 other downstream 652136 11371450 ~ 11418476 (+)
LOC120552281 dap other downstream 1071699 11791013 ~ 11807308 (+)

Expression


Co-expression Network