G219169


Basic Information

Item Value
gene id G219169
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 11771851 ~ 11807316 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU296600
aagatATCTTTACTTACTATGACAACCAAACCTAATACCTAAGTCCACTCAATGGCTAAAGATTTGTACAATTTGAACAATttaaacgaaaaaaaaaataactgagaaaaacaaatataaaaactcTTTTTAAACGTAATTAAATTAACATAGGAAATCATTCCTTCTTGgcaagatacattttttttttcctttctttcctggAAACCTGAACATTAGTGTTGCAATAAATGACACTTGAGTGTAAGGGGATGGGTGATTTAAGGAAaagggtggtgtgtgtgtgtgtgtgtgtgTGTGTTAATTTCTAGGAAAGTGTTGCTCATGACTTTGGGGGCTGATACAGATTTCTGATATGCAACGAGCCATACCTGCAGATATCCTGGCAAGTAGAAATAAATGTATTGCATTTTCCTTGTACACGGACTAACTGTCACAGAGTTAAACAGATTTGTTCACACACTTTTCTATGGAACGTTTTTGCATGGCGATTACTACCTTCATCTTGCAGTTAGGAGCCTCACTATTTTCGGAACTACTTCTCTGCAACGCTTTGTTCAACCATGTGATGTTCCGAGTAATGTTAATGCAAACACAACGCACACTGCAGCTGCTTCACAGtatcttttcatttcattacattttgggCTATATTTTCATTCCAGTCGACTCTGGTGAATAGCAAATTAAATAGCAAACGTAAATCCATGAGAGTCAAatgagacaataaaaaaaaaattcctgaAATTTAAGCAAGGAGGCACTGATGGGAGACTTTAATTATGAAGCAGGTTGAGTTTGCATTCAAATTTGCATTGCCAGGGAATGATTgacattattacagctacaacAAAGCAGTCAAAATGGAGAGTAGATCAGAAATTTAGGATGACTCCTCTCTGTTAAATGAAGGTAGGAACAGTGACACAGCAGGAAACTGCAACGAAAGCTGTATTAGCTTCTGCCAAAGCTATCTGGAGTCATGACACTAACAACATGCATCAAGTAGCTACTTGGGTAATGACAGCCATCATTACAGAAAAGTGGGTCTTGTTttgcatttcattggttctccTAATTGGGCATCTATACATTTTGAAATGGCCAAATGTAATTCTTGTCAAAGTTGCCGCCGGTAATCTCAGCGTTTGGGCTAATAATGCGGTCATGTAGTTAGCTACTTTAACTCTCTGGTCCATGCTGTACCCGTGCAGTTTGGCAACAGTCTCAGTGATCCACACGCATCGAACTGAGTTTTGCAATTTAGTAGCTGCTCTCCGTGTTCTTTTTGGTTTGTGTTGATAATGTAAAACTGGTGTCCACCTCATGAGTTGTAGATTGGTTCTTTTGGTCTGTGAAGATCATAGGTAGAAGGCTGGAGCTTAGGCTCATCACTGTGAGTTGATTGGTTGGTTAGTTGGCCTGATTGATAGGTTGCCGTTATTGGCTAGTTGCTGTGATGGGGTATTGGTCGGCACATCGCTGGGGTGAGTGTTCCCCCCACAGACTCAGATTTCTCAACTAAAGGGTAATCCTAGAACAATAGCCATTTTACAAGACCCTCCACCCATTTAAGACTATACGACTGTTGAAACAATCCCTCTTAAGGAGAGGACACAAAAGTGCAGGACGAATAGTGCAACAACAATGCAGCAGGGGTGTAAGGAGGAGGACTGTATTGGCATTGGCGTCTGTTGCTGATTAATTCATCCTACATGAAATGCAACAGGCTAACAAAAACTACTCCGAATATTTAGAGGAGATCTGTGCCTGTTGGGGAAACATCTTCATCCTATGTGTTCCATTGGGAAAGGCCGGCTGGTGGAGTTGGCGTAACCGATGTAGCTCGCTGCCTAGTTCACTTGCGGGGCTGGTGGATGTGCTGGTTGATGTGCTGGGAAGCGGGCAGCTTGGAGACACAAGGCTGGGGCTTCTGATGAGCCACCTGGGCGGCTGCAGGGGTGAAGT
>TU296601
aagatATCTTTACTTACTATGACAACCAAACCTAATACCTAAGTCCACTCAATGGCTAAAGATTTGTACAATTTGAACAATttaaacgaaaaaaaaaataactgagaaaaacaaatataaaaactcTTTTTAAACGTAATTAAATTAACATAGGAAATCATTCCTTCTTGgcaagatacattttttttttcctttctttcctggAAACCTGAACATTAGTGTTGCAATAAATGACACTTGAGTGTAAGGGGATGGGTGATTTAAGGAAaagggtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296600 True 1968 lncRNA 0.42 2 11805289 11807316
TU296601 False 363 lncRNA 0.34 2 11771851 11807316

Neighbor

gene id symbol gene type direction distance location
mak mak coding downstream 414506 11342741 ~ 11357345 (-)
tfap2a tfap2a coding downstream 435461 11322602 ~ 11336390 (-)
ofcc1 ofcc1 coding downstream 561351 11125133 ~ 11210500 (-)
slc35b3 slc35b3 coding downstream 814956 10944092 ~ 10956895 (-)
eef1e1 eef1e1,LOC102782929 coding downstream 876444 10886540 ~ 10895407 (-)
ankrd33ba LOC103353357,LOC104951657,LOC103456515 coding upstream 6038 11813354 ~ 11828173 (-)
ropn1l ropn1l,LOC102776686 coding upstream 28422 11835738 ~ 11843639 (-)
nup58 nup58,LOC102776201 coding upstream 37079 11844395 ~ 11864737 (-)
LOC120551938 NA coding upstream 93774 11901090 ~ 11904373 (-)
pex2 pex2 coding upstream 427410 12234726 ~ 12242310 (-)
G219113 NA non-coding downstream 294748 11378607 ~ 11477103 (-)
G219138 NA non-coding downstream 302534 11467094 ~ 11469317 (-)
G219130 tmem56,LOC103482516,LOC104925854,LOC107094156 non-coding downstream 326096 11441244 ~ 11445755 (-)
G219125 NA non-coding downstream 351096 11416732 ~ 11420755 (-)
G218986 NA non-coding downstream 1054952 10715085 ~ 10716899 (-)
G219206 mtmr6,LOC102775911 non-coding upstream 70821 11878137 ~ 11880126 (-)
G219217 NA non-coding upstream 101079 11908395 ~ 11908666 (-)
G219244 zfhx4,LOC102799230 non-coding upstream 317165 12124481 ~ 12212318 (-)
G219306 NA non-coding upstream 690493 12497809 ~ 12498015 (-)
G219369 NA non-coding upstream 1278486 13085802 ~ 13088344 (-)
bloc1s5 bloc1s5 other downstream 903064 10864285 ~ 10868787 (-)
G218950 NA other downstream 1102324 10577399 ~ 10669527 (-)
LOC120552013 NA other downstream 1156630 10604320 ~ 10615221 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other downstream 1923610 9833462 ~ 9848241 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other downstream 2801213 8957409 ~ 8970638 (-)
pign pign,LOC104945957,LOC102796964 other upstream 610032 12417348 ~ 12433035 (-)
bmi1a bmi1,commd3,LOC103371470,LOC106919738,LOC103482475 other upstream 1370944 13178260 ~ 13194142 (-)
pdk3a pdk3 other upstream 1881105 13688421 ~ 13696741 (-)
sema5a sema5a other upstream 2016142 13823458 ~ 13940381 (-)
neto1l neto1,LOC102782256 other upstream 2178050 13985366 ~ 14076069 (-)

Expression


Co-expression Network