G220031


Basic Information

Item Value
gene id G220031
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 15857651 ~ 15933814 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU297744
ctctctctcttactctcccCTCTTCTTCCTGCTTTTATCCCAATCTTCCCTTCCCCTCGGGGGTCTTGGTCCCTCTACATTTGAGAAAAAGTGAcactttttgtgatttttctaGCTAGTTTTTCTCTTTGTCAGACATTGTGCAGGAATGCATGATGGGAACTGGGAGGGGAATTCATTTATCCCTAAATTCAACTTTATTATTCTGTGGACCAAATCCAGCAGGGGTTTTGGGAAAGGGGAAGGGATGGATGGCAAAGGAGAAACAAGGCAccacaagtctttttttttttttttttttttttttttttttttttttt

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome
ko03015 mRNA surveillance pathway
ko04138 Autophagy - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU297744 True 320 lncRNA 0.39 2 15857651 15933814

Neighbor

gene id symbol gene type direction distance location
ythdf3 ythdf3 coding downstream 14695 15833119 ~ 15842956 (-)
bhlhe22 bhlhe22 coding downstream 89064 15766414 ~ 15768587 (-)
trim55b LOC103362149 coding downstream 213722 15636850 ~ 15643929 (-)
rrs1 rrs1 coding downstream 240498 15614930 ~ 15617153 (-)
LOC120551907 NA coding downstream 244466 15609856 ~ 15613185 (-)
pan3 pan3 coding upstream 1811 15935625 ~ 15950850 (-)
pdx1 pdx1,LOC102786186 coding upstream 30523 15964337 ~ 15967374 (-)
gtf3ab NA coding upstream 54340 15988154 ~ 15991388 (-)
rpl21 rpl21 coding upstream 63261 15997075 ~ 16000541 (-)
wasf3b wasf3,LOC102784165 coding upstream 80799 16014613 ~ 16029147 (-)
LOC120551922 NA non-coding downstream 80723 15773677 ~ 15776928 (-)
G220000 NA non-coding downstream 94941 15762479 ~ 15762710 (-)
LOC120552505 NA non-coding downstream 154747 15701919 ~ 15702904 (-)
G219982 NA non-coding downstream 202239 15654531 ~ 15655412 (-)
trnaa-agc_30 NA non-coding downstream 212221 15645358 ~ 15645430 (-)
G220171 NA non-coding upstream 184139 16117953 ~ 16118588 (-)
G220203 NA non-coding upstream 274444 16208258 ~ 16209541 (-)
G220211 NA non-coding upstream 330763 16264577 ~ 16264785 (-)
G220243 NA non-coding upstream 404004 16337818 ~ 16339037 (-)
G220254 NA non-coding upstream 431390 16365204 ~ 16366613 (-)
mtfr1 NA other downstream 176763 15676254 ~ 15680888 (-)
LOC120552366 NA other downstream 304597 15539203 ~ 15553054 (-)
trnar-ccg_2 NA other downstream 305959 15551620 ~ 15551692 (-)
c22h8orf34 LOC103367670 other downstream 497335 15302985 ~ 15360316 (-)
xkr9 NA other downstream 807875 15045160 ~ 15049776 (-)
si:ch211-140b10.6 polr1d other upstream 34917 15968731 ~ 15973663 (-)
G220117 usp12,LOC107701680,LOC107705210 other upstream 70065 16003879 ~ 16004764 (-)
G220124 NA other upstream 130856 16064670 ~ 16065221 (-)
drd3 drd3 other upstream 332489 16266303 ~ 16284735 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other upstream 848258 16782072 ~ 16795124 (-)

Expression


Co-expression Network