G220203


Basic Information

Item Value
gene id G220203
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16208258 ~ 16209541 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU297964
GGCAAGAAACCTTTGTTTATTTTAACAGTGAATTGCAATACAGCTTAAAATTTACAAAACCGCAACCAAGTTTAAACAAGTGGTCACTTGCAGAAGTGGTTTAAAGTTAGCAAAATTATGCACACAGACAAGGGTAATGGCAACACTGTAAACATCAAACAAGGTTCAAGGTATTAGTGGTGTATCACTAACAattgattaaaaagaaaaaaatagtgtTCATGTCAACTTGGAAATCATAGAACAAACTTGCATCTAGTGTTGACAGGATAAGAGCATGGTGCTGAGATAACCTGAGATAGTCTCATGACCCtacacatatttaaaaatacaCCAAATCATTCTTTTTTAAAtagaaaaaaataaagtacattaaactgtcaaacatgtacaggtgaaaatttttttttatcaaatatgTATTGAATATgtggtttgaaaaaaaaacaaaaaaaaacaaggcacATCAGCAGTATCTTCTGTACACCAGATTTGGCTCATATACCGTATTATAAAATGTAGGTTATTTTTCTATTTGCGATTTGTAAATTTAATGGCGCAGTCACCCCTGCAGTTTacatgtagaaaaaaaagatgcattATCATGACTCCAAAAGAGAGGACAGACCTTTAAATTTGAGTCACTGATTCTAcaatttttattgaaaaaaataaaaatcccaaAATATATCACAGTCAATGTAAAAGGCACTTGtgcaaaaattaaaatatgtgcaaaaatgtaaatggaGAATATAGTTTTAAATCATATCGATTCACTTCCctggaataaaacaaaaataaaagtatttccaATAGCTCACTTGGTGTGGCATGAGGCTCTGAAATCCAATTAAAGGAAAGAGTGAAAAAGAAGCCAGCCAAGTGAGCTGACAATAGCACCCTACAGAAATCTAAACCCGCTGCTCGATGTGTGTCTGACTCTGATGCAACTTTGTCCTCGCAGCAGTCAGTACACAGctttaaaaaataactaaaacaccCTGGCACTTGATGCTCCGGCACAGGCTTTGGGACGTGTAACCCCTGGCAACACATGGCATGTCTGGGGTCTGGGGACATCTTCATGGCAACGTCACTGCATCCCAGGGATTTCCTCAGAGGCAGTTCACTACTGCAGTTTTTTTGTTCCTCCACAGGGCCGGGACAGGCCCTCTGTAGTCGCCATGTGTCGAGCATCACTGTGGTTCTGCTGTGCGATTGGCCAAAGCAAAGTTCTGCTGTAGCACCACCAGAGAGCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297964 True 1264 lncRNA 0.38 2 16208258 16209541

Neighbor

gene id symbol gene type direction distance location
naa50 naa50,LOC106579447 coding downstream 23853 16180440 ~ 16184405 (-)
LOC120551982 usf3 coding downstream 28056 16169979 ~ 16180202 (-)
LOC120551886 shisa2 coding downstream 96773 16104128 ~ 16111485 (-)
cdk8 cdk8 coding downstream 169421 16030459 ~ 16038837 (-)
wasf3b wasf3,LOC102784165 coding downstream 179111 16014613 ~ 16029147 (-)
ccdc191 ccdc191 coding upstream 7617 16217158 ~ 16228750 (-)
si:ch211-161h7.8 LOC104965030,LOC103368931 coding upstream 76956 16286497 ~ 16288328 (-)
mix23 ccdc58 coding upstream 118632 16328173 ~ 16333827 (-)
kpna1 kpna1 coding upstream 129571 16339112 ~ 16346072 (-)
sec22c sec22c coding upstream 248792 16458333 ~ 16464016 (-)
G220171 NA non-coding downstream 89670 16117953 ~ 16118588 (-)
G220048 NA non-coding downstream 273989 15881506 ~ 15934269 (-)
G220031 NA non-coding downstream 274444 15857651 ~ 15933814 (-)
G220042 LOC100701814,LOC101478750,LOC102788341,LOC102295400,LOC103362138 non-coding downstream 336964 15870720 ~ 15871294 (-)
LOC120551922 NA non-coding downstream 431330 15773677 ~ 15776928 (-)
G220211 NA non-coding upstream 55036 16264577 ~ 16264785 (-)
G220243 NA non-coding upstream 128277 16337818 ~ 16339037 (-)
G220254 NA non-coding upstream 155663 16365204 ~ 16366613 (-)
G220257 NA non-coding upstream 238389 16447930 ~ 16450221 (-)
G220272 nktr,LOC102798446 non-coding upstream 262707 16472248 ~ 16477515 (-)
G220124 NA other downstream 143037 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 203494 16003879 ~ 16004764 (-)
si:ch211-140b10.6 polr1d other downstream 234595 15968731 ~ 15973663 (-)
mtfr1 NA other downstream 527370 15676254 ~ 15680888 (-)
trnar-ccg_2 NA other downstream 656566 15551620 ~ 15551692 (-)
drd3 drd3 other upstream 56762 16266303 ~ 16284735 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other upstream 572531 16782072 ~ 16795124 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other upstream 665108 16874649 ~ 16875300 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 2217221 18426762 ~ 18483776 (-)
G220833 NA other upstream 2400695 18610236 ~ 18697970 (-)

Expression


Co-expression Network