G220243


Basic Information

Item Value
gene id G220243
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16337818 ~ 16339037 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU298013
agaatGATCTAACCTAAACACTGGACTGACCATGAGACGTTGACCACATTTGACTGTGGTCTTCAGACTGAACTGCCCACACTGGGGCCACGTCGCCAGTCCCAACCCCAACCCAAGGACTCTACTAACCTCTACAGAAGGCACTTCCACGACTCAAAAACGGAGGTTGAATTCCATCACCTCCTCTCTGGCCATTGGATAAGTGCCCACAGATGGACAAATTAGGAACTTGACCTTGTCGCTGAGGGGTGGAGCTTGTCAGTGACATACCAGGCTGCTCTGCGTTCCCTCCTGGATCTCATATCATGCATTCCTTTATATCCAGTAATGGGACTTTCCACCTGCACAGGCTTCATCCTGAAGAGTTTAGACTGCCTCTGGTGTGATGTGAATAACCCCATGGAACCATGGGAATTTGAGTCTTCCCTCGCACTGAGACCATTACACAGACTTGGACGAGACAAAACAGACTATTTAACCCTGGATTCTGTCCAGCAGCAGACCAGCGGGAATTTGTATTATCTTACCATAATTGCATTTCATTTGCAGCACTTTAGTTCAGGACTGATGCCTGCTCTTCGAGAATATACCGTAGTTTTTACGTTAACTATTTAATTGGTTCATGACGCTTCCTCGGGAAGCAAGGTTTAAAGACGTGTGGTCTGAATCCTCGGTCCCCTTCTGGTATGACGAGGATTACAATGTACTTTACCGTTTACCCTTCCCACTGAAAATCTTAGCACACTAATTACAACCAGTAGATCATGCTGCCTCAGCAAAGCTAGAAGAACTATATTGTGACAAAGTAAACCAGACTCACAGAAAATTTTCTGTTTTAGCTGTGAGCAGTCGGTTCAGGTAGTATTTTCCAATTTGATCATGCCATATCATCTACACGTCAGCTATTTGGTCTAAAGTTGGCCTTTTTTTtagaaacaatgtttttttagttGGGGTTAGCATCTGCCATGTTGCTGTGCCATAATCCTAATTCTACAGGAATCCTAGATAATTTAAACAGAAATCCAGATAAAAGCTTGAAAATACTGGTGATCACCTACCTTAACAAATGTTTGTTTACCAAGTTCTCTTAACATTGCTTACTTTTATCAAAATCTCTGCAAGAGATGACCAGCTCTATATGTTAATTACTGTTTGTTGTATTGAGTTTGTGCAACTGTCCCTTGTTATGCCATTTGCATAAAAGCCGTTTCATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU298013 True 1220 lncRNA 0.43 1 16337818 16339037

Neighbor

gene id symbol gene type direction distance location
mix23 ccdc58 coding downstream 3991 16328173 ~ 16333827 (-)
si:ch211-161h7.8 LOC104965030,LOC103368931 coding downstream 49490 16286497 ~ 16288328 (-)
ccdc191 ccdc191 coding downstream 109068 16217158 ~ 16228750 (-)
naa50 naa50,LOC106579447 coding downstream 153413 16180440 ~ 16184405 (-)
LOC120551982 usf3 coding downstream 157616 16169979 ~ 16180202 (-)
kpna1 kpna1 coding upstream 75 16339112 ~ 16346072 (-)
sec22c sec22c coding upstream 119296 16458333 ~ 16464016 (-)
klhl40b klhl40 coding upstream 175155 16514192 ~ 16517938 (-)
hhatlb hhatl coding upstream 180005 16519042 ~ 16527050 (-)
LOC120551893 LOC103377216,LOC107591252,LOC101472906,LOC100709944 coding upstream 188627 16527664 ~ 16534798 (-)
G220211 NA non-coding downstream 73033 16264577 ~ 16264785 (-)
G220203 NA non-coding downstream 128277 16208258 ~ 16209541 (-)
G220171 NA non-coding downstream 219230 16117953 ~ 16118588 (-)
G220048 NA non-coding downstream 403549 15881506 ~ 15934269 (-)
G220031 NA non-coding downstream 404004 15857651 ~ 15933814 (-)
G220254 NA non-coding upstream 26167 16365204 ~ 16366613 (-)
G220257 NA non-coding upstream 108893 16447930 ~ 16450221 (-)
G220272 nktr,LOC102798446 non-coding upstream 133211 16472248 ~ 16477515 (-)
G220273 NA non-coding upstream 140346 16479383 ~ 16481158 (-)
G220300 gars,LOC103369121 non-coding upstream 207891 16546928 ~ 16548724 (-)
drd3 drd3 other downstream 53083 16266303 ~ 16284735 (-)
G220124 NA other downstream 272597 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 333054 16003879 ~ 16004764 (-)
si:ch211-140b10.6 polr1d other downstream 364155 15968731 ~ 15973663 (-)
mtfr1 NA other downstream 656930 15676254 ~ 15680888 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other upstream 443035 16782072 ~ 16795124 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other upstream 535612 16874649 ~ 16875300 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 2087725 18426762 ~ 18483776 (-)
G220833 NA other upstream 2271199 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 2433940 18772977 ~ 18810944 (-)

Expression


Co-expression Network