G220382


Basic Information

Item Value
gene id G220382
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16742287 ~ 16745412 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU298209
ACACATGGTAGTGCTAATTAAAACAAACGAGGAGCACTAAGAGGAGGCTGATATGCTCATTCTTTAttgattaaaaataatcaaGAGAAACATGCTTAAAACTCCAAAACGATCAAAAATAGAGcaaatgaaataatgaaagaaaaaaaaaaatagctggtGGAAAATTTAAAGATATCACAGCCTTGATAAGTTATTGCCCAGACAAAAGGGATTTTTGCCAGTCATCAGTTTCTACAGCTTGGTTAGACTACATGTAAGCCGGACAGAAGAGACtgagaaagggaaagagaaagGCTGAGAACAAAGCCATTAGATCTTCAACTCCGTTAGAAGCTGGGCTCAATatatgccacacacacacacacacacatatatacatacatctcacagacacacacacacacacacacatatatacatacatctcacagacacacacacacacacacatatatacatacatctcacagacacacacacacacacacatatatacatacatctctcacacacacacacacacacacacacacacacacacacacaccccctgtGTGACTAAACCAGGAGAATGGCACCAAATACTGCAGTTTAGAAACGTAACAGTGGGTTACTGACTTTGTGGCGAACACAGGCTCAACACACCTGTATATCTTTATTTCAGGTATCTTCACTTGTAACAAGAACTACATTTCAAAGACACTGAAAATCTGAACCAAAACCtcgacagaaaaaaagaaatacacttGGTCGTTTTCAATTTAAGGCTAGCATAAAATTTAACACGTTTAAAGTCAAAATAAGATTTCCTCTCAACATTTTCTCTGCAAGCaaaaaatgcattcattttcattcaatatGGCATCGGTTAAGTTTATGATGACATCACATCACCAAATGTAACAGCAAAACCTTGCTGGCGTTTCAGATGTACACATTAGAGCAGTATTAAATGAACCTCCCACTGCCAAGAACTGCGAGATGCACATTCATTAATAAACCATGTCACTAATGCACTAAAAACATCCAGAGTGTAGGTTGTAAGGATGTGACTGGACTGATAACGGCCTTTTTCATTCAAAATCCAAAGCACATCTGATCGTTCTAAATATCGACAATCATAGCTGAGCTTTTTCAAAACTGTGGGATGTAAAATCTTCATTTTAGTCATTAAAAATGACTAACAAGTGATAAAGCAGCTGGATGACTTCAATGTGGGTCAAAATAAGTGCTGGGAACAGCCTCCACTTGGTATTATTAAGAGTTGGAGACAAATTTGCAGTTACTCGGCTAAAAATTTGGGGAAATTTAAGGTGGCATTAAGCAGTGCATCAGGAGATCTGTGGCTCCACGgtaaaatatattcaaacttttcaAAAGGCAAAAAGTGAAAAgctgaaaatgttttaatttaaataagagTCATAAATGCCAGAGTAATTAGCTGTATGTCCCGCAAAATTAATTCAAAGTAAAATTTGCAGTGCAGTCGTCTTCCTTCACGCAGCAACCCACAATCGTGTcataggaaagaaaaaaaggccaAGAGTGAAACACCCagtataaaaacaaaatcaaagccAACTATTATGACTTACACACTAGAGGTTAAATCAAGAACTTAAGTTTcatacacataaacaaaaaTGCACTTAAGTCTTTTCGAATTTGAGAAattgattccaaacagacacaaacgAATACCAACAGACAGGCACATGTGCTCATATAACACTTAGGTTTCAGCTGTCGTCAAACTTTTTACTTTACAAAAATTTCAACAAATAATCAAGTTCGCAAGACCTCAGGCCAGTGTCTTGTGTGAAATGAGAGGAGGCAAATTTGGCAACGGTACAAATTAATTAATCTTGCACTCCTTTTTTCTAACCATCTAAGTTATATAATTAAGTACAGCAAATTTAAAGCCAGCTTACCTCTTTTATCTGGACACTTTTCTTTCTAATAATGCTGGTCGTAtcagcactttaaaaaaggaCTACACTGGCAATATTCGTTATTTTTCGTATTGTCTTATCGTTGCCCAAAAACTATTGAAACTACGTTattgagccacactgttgcactgggggATATCTTCCTGTtcatgggcactgtagtttattttgagtccaTTTGTGTAAAATTTgttactcactagagcaccaaatgtgtataTAGCCACAGCTAagaatagtccccaacaaatgcacttttGCTTCGGTTtaaataacatttcataaaacTACAGTGGCCAGCCGTTTCAGCAAATtatttttcctttaaaaaataaaataaaatgtaactatACATCCATAACCTCTACAGTGACAGACTAACAAATTGTTGGTTTTTGGTCTTTCCATTGTATTTGTTGACAATTAAACAGAATAAAAGTAGCCTTATCCTTCAAAGATTGTTACTGTTAGGAATGCTCACATCCTTctgaaaaagtaacttaacaTGTGTTGAGTACAGAAGTGTATCTAAAATTGAATTAGTAAGCTGCATCTTACCTCCTCTCAAAATGAAGTAAAAAGTGTGACGTGAGCAACTGAAACCACACTTGTACATTCCAGACAACATAATGCTCCATATGGTAACTGGGGAATTCCCCCCCAAAAACGTGCATTCAGTAGTTCTGATGAATATAAGGCATTGTTATACTTATCAGGATTCAAGGGTGTTAGTTTAGATTGTGCAAATGCATCACATAttagagaaaaacaaaataacagaatGAGGGAGACCACGTAAGTTAAAACGGTTTGTTGCAGATACTTGCATCCTTCTACATTTACGCTGTAAACTTTTTTTTGAGTGATTCTTATACTGTACGCTCTGATACTTCAGCCAACCACAATATTCAACGAGGCGGAGTTGTATAATCCTATGGGTGACAAAAGGATACTGTCTTCTTTGGCAGTAGTGGTTTCTTTACAGCCATAGAAAGAAATAATtcatttaactattttttttattattattttcacattttttagGCAAGTCACGGTCCCAAGGTAGTACAACAGTTTAACTAATGCTGAGCTGAGCAAAGCCCATCAATTTGATGTCATCTGGTATTTCAGACCCCTCAGTTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU298209 True 3104 lncRNA 0.36 2 16742287 16745412

Neighbor

gene id symbol gene type direction distance location
plcd1a NA coding downstream 120606 16601629 ~ 16621681 (-)
LOC120551893 LOC103377216,LOC107591252,LOC101472906,LOC100709944 coding downstream 207489 16527664 ~ 16534798 (-)
hhatlb hhatl coding downstream 215237 16519042 ~ 16527050 (-)
klhl40b klhl40 coding downstream 224349 16514192 ~ 16517938 (-)
sec22c sec22c coding downstream 278271 16458333 ~ 16464016 (-)
LOC120552381 LOC104957866 coding upstream 134083 16879495 ~ 16881724 (-)
bdh1 bdh1,LOC103373205,LOC107382809 coding upstream 205243 16950655 ~ 16965739 (-)
gyg1b gyg1 coding upstream 221233 16966645 ~ 16977681 (-)
cpb1 cpb1 coding upstream 234512 16979924 ~ 16987685 (-)
agtr1b agtr1 coding upstream 242397 16987809 ~ 16994577 (-)
G220373 NA non-coding downstream 40730 16694587 ~ 16701557 (-)
G220300 gars,LOC103369121 non-coding downstream 193563 16546928 ~ 16548724 (-)
G220273 NA non-coding downstream 261129 16479383 ~ 16481158 (-)
G220272 nktr,LOC102798446 non-coding downstream 264772 16472248 ~ 16477515 (-)
G220257 NA non-coding downstream 292066 16447930 ~ 16450221 (-)
G220443 NA non-coding upstream 141844 16887256 ~ 16888024 (-)
G220445 NA non-coding upstream 152777 16898189 ~ 16898537 (-)
LOC120551964 NA non-coding upstream 369818 17115230 ~ 17398235 (-)
G220488 NA non-coding upstream 452979 17198391 ~ 17201334 (-)
G220611 NA non-coding upstream 806348 17551760 ~ 17552963 (-)
drd3 drd3 other downstream 457552 16266303 ~ 16284735 (-)
G220124 NA other downstream 677066 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 737523 16003879 ~ 16004764 (-)
si:ch211-140b10.6 polr1d other downstream 768624 15968731 ~ 15973663 (-)
mtfr1 NA other downstream 1061399 15676254 ~ 15680888 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other upstream 36660 16782072 ~ 16795124 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other upstream 129237 16874649 ~ 16875300 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 1681350 18426762 ~ 18483776 (-)
G220833 NA other upstream 1864824 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 2027565 18772977 ~ 18810944 (-)

Expression


Co-expression Network