G220443


Basic Information

Item Value
gene id G220443
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16887256 ~ 16888024 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU298288
TTGATCATCTTATTTtcataaatatttgaatatcttTGTCCATCCATAAAAATCTGAAACATAATTTAATTAAAATCCatagaaagagaaaaaacagaaaacaatcaCAGAGCTGCATCAAACATGGCTCACTCATTTACACCAATAAAAAGGCAAACCTACACATAAGAAAGGCGGGTGTTTAAAATGAGACGTAAGGCAAAGAGGCTTAAAATGGTAACTGCCTGAGattcaaacatatttttcaggTGTACTCttctcaaaaataaaaacatccaccTAAAATTCCAAAAtatgaaaaaattaaatcacATGATGGATCTGTGGGAACTTTAGCTCAAACTTTCTTTTTCTAACAGCGTTACAAACCATTCAGCAGGTTATAATGGTGAAAACATATTATTCaccttagggctgggcgatatggagaatatcagatatcacgatattcttcaCCAAATACATTGATACCGATATTGTGACGATATTGTAGGATTGACAATTTTTTataatgagattttagatcatCATTAATAATGTGGTAAACAGTTTCAAGTGAAATTATATACTGACTATGTTGACATGCATGCataaaattgtatgatgttaAAACAAATCTGCTAATCTTCAAATGATATTCCCTCAAAATGTTTCACAACAGATTTTCTGAGAAAATTGAGTTAGTAGGTGCTTGTTATTACCAATTTAGACACTGTaattgtacagtacaggccaaaagtttggacacactttctcattcaatgcgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU298288 True 769 lncRNA 0.31 1 16887256 16888024

Neighbor

gene id symbol gene type direction distance location
LOC120552381 LOC104957866 coding downstream 5532 16879495 ~ 16881724 (-)
plcd1a NA coding downstream 265575 16601629 ~ 16621681 (-)
LOC120551893 LOC103377216,LOC107591252,LOC101472906,LOC100709944 coding downstream 352458 16527664 ~ 16534798 (-)
hhatlb hhatl coding downstream 360206 16519042 ~ 16527050 (-)
klhl40b klhl40 coding downstream 369318 16514192 ~ 16517938 (-)
bdh1 bdh1,LOC103373205,LOC107382809 coding upstream 62631 16950655 ~ 16965739 (-)
gyg1b gyg1 coding upstream 78621 16966645 ~ 16977681 (-)
cpb1 cpb1 coding upstream 91900 16979924 ~ 16987685 (-)
agtr1b agtr1 coding upstream 99785 16987809 ~ 16994577 (-)
zic1 zic1 coding upstream 208227 17096251 ~ 17099679 (-)
G220382 NA non-coding downstream 141844 16742287 ~ 16745412 (-)
G220373 NA non-coding downstream 185699 16694587 ~ 16701557 (-)
G220300 gars,LOC103369121 non-coding downstream 338532 16546928 ~ 16548724 (-)
G220273 NA non-coding downstream 406098 16479383 ~ 16481158 (-)
G220272 nktr,LOC102798446 non-coding downstream 409741 16472248 ~ 16477515 (-)
G220445 NA non-coding upstream 10165 16898189 ~ 16898537 (-)
LOC120551964 NA non-coding upstream 227206 17115230 ~ 17398235 (-)
G220488 NA non-coding upstream 310367 17198391 ~ 17201334 (-)
G220611 NA non-coding upstream 663736 17551760 ~ 17552963 (-)
G220665 NA non-coding upstream 1022495 17910519 ~ 17910741 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 11956 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 92132 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 602521 16266303 ~ 16284735 (-)
G220124 NA other downstream 822035 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 882492 16003879 ~ 16004764 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 1538738 18426762 ~ 18483776 (-)
G220833 NA other upstream 1722212 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 1884953 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 2050889 18938913 ~ 18949495 (-)
G221048 ankh other upstream 2427567 19315591 ~ 19326894 (-)

Expression


Co-expression Network