G220445


Basic Information

Item Value
gene id G220445
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16898189 ~ 16898537 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU298291
GCAGGAGCAAAACGGGCACACGCAGGAACGAACACAGGGCACACGGAGGAAACACAAGGGCacggctaaaaaaaacaacaacaatctgaCACCAGACAGAGGGATtcacagaggttaaatacatgaggtaacGAACGAATGAGGTACAGGTGATAcggcaggtgaaacacatcagggcggggcaggacaatcaacaaaggcgggaaaacacaggaagtaaactggacaagacagaaaaccagactatcaaaataaaacaggaaacaggaaaaacagacagaaaacatgacatCAACTAAACATAGAAACTTGACACAACACAGAACACAGCCAAGACAGGATAAACACA

Function

NR:

description
tuftelin-like

GO:

id name namespace
GO:0015467 G-protein activated inward rectifier potassium channel activity molecular_function
GO:0099094 ligand-gated cation channel activity molecular_function
GO:0022843 voltage-gated cation channel activity molecular_function
GO:0005242 inward rectifier potassium channel activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function
GO:0005261 cation channel activity molecular_function
GO:0005267 potassium channel activity molecular_function
GO:0015079 potassium ion transmembrane transporter activity molecular_function

KEGG:

id description
ko05412 Arrhythmogenic right ventricular cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU298291 True 349 lncRNA 0.45 1 16898189 16898537

Neighbor

gene id symbol gene type direction distance location
LOC120552381 LOC104957866 coding downstream 16465 16879495 ~ 16881724 (-)
plcd1a NA coding downstream 276508 16601629 ~ 16621681 (-)
LOC120551893 LOC103377216,LOC107591252,LOC101472906,LOC100709944 coding downstream 363391 16527664 ~ 16534798 (-)
hhatlb hhatl coding downstream 371139 16519042 ~ 16527050 (-)
klhl40b klhl40 coding downstream 380251 16514192 ~ 16517938 (-)
bdh1 bdh1,LOC103373205,LOC107382809 coding upstream 52118 16950655 ~ 16965739 (-)
gyg1b gyg1 coding upstream 68108 16966645 ~ 16977681 (-)
cpb1 cpb1 coding upstream 81387 16979924 ~ 16987685 (-)
agtr1b agtr1 coding upstream 89272 16987809 ~ 16994577 (-)
zic1 zic1 coding upstream 197714 17096251 ~ 17099679 (-)
G220443 NA non-coding downstream 10165 16887256 ~ 16888024 (-)
G220382 NA non-coding downstream 152777 16742287 ~ 16745412 (-)
G220373 NA non-coding downstream 196632 16694587 ~ 16701557 (-)
G220300 gars,LOC103369121 non-coding downstream 349465 16546928 ~ 16548724 (-)
G220273 NA non-coding downstream 417031 16479383 ~ 16481158 (-)
LOC120551964 NA non-coding upstream 216693 17115230 ~ 17398235 (-)
G220488 NA non-coding upstream 299854 17198391 ~ 17201334 (-)
G220611 NA non-coding upstream 653223 17551760 ~ 17552963 (-)
G220665 NA non-coding upstream 1011982 17910519 ~ 17910741 (-)
G220659 NA non-coding upstream 1026034 17924571 ~ 17924957 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 22889 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 103065 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 613454 16266303 ~ 16284735 (-)
G220124 NA other downstream 832968 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 893425 16003879 ~ 16004764 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 1528225 18426762 ~ 18483776 (-)
G220833 NA other upstream 1711699 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 1874440 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 2040376 18938913 ~ 18949495 (-)
G221048 ankh other upstream 2417054 19315591 ~ 19326894 (-)

Expression


Co-expression Network