G220687 (rbm33)


Basic Information

Item Value
gene id G220687
gene name rbm33
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 18010783 ~ 18015252 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU298629
CTCTTTATACAAATTGGATGCTTTACAAGCATATTAAGTCATAAGATAAGGTACTTGAACACAATAAAAATGCACCTAAGTATCAAGTTCGGTACCTACCTCTATGGGGCCGATGGACATGAGAAGATTCTGCAGTTGAACATCAGTTGTGGATGAGGAGAGGCCCTTTATGGACACAGTGCAGCGTTCGCCCTCTGCTCCTCTTTGGCTCTGTCTGGTGGATATTGGACGACCTCGACCCATCTGACCACCCCCTCTACCTCGGCCCCGGCCCGAAACGACAACCCTGTTTTGCTGTTGGTTGCCCATAACCCCTCGGCCAGCCTGTGGTGTTCCGCCTGGTCCCTGTTGCTGCTGCGCTGTCATGGTAACCTTTCTTTGCACGGCCTGGTTGAGCGGGGTTGCCGACCAGGTGCCTTGTTGCTGCAATGGGCCGCCGGCTGCCACTGGCCCCTTTCCACTCACTCCTGAAAGTTTGACGACTCTGACTTTTGGTGGCACCTGCTGGTCTTCAAAACCAGAATTCTTGGCCCGCTGCATCACAGTTCTTTTAGTCCCAGGTATAGGTCCTTGAGTTGGAGCCTGAGCCTGGCCAGGGCCCACAGAGGGAGTTACAGGTATTATCTTTTGGGGGACCTGATTGGCTTGGATCTGAACACCAGGCATGTTAATGTTCTGCACAGCACTGTTTCTTCGCTGttgttgcagctgctgctgctgatgatttTGTTGAGGCGGTTTCCATTGCTGGTCTGGAACAGGCCCAGGGGTCTGTTGCTGCTGGGCACTACCTTTTACCATCTGCAGGCGTGTCTTGACATTGGGACGTGGTGTAGGGATCTGAGGAGTGCCGTTGGGCGGGATGGGGGTGGCTTGGTTAGAATTCTTTAATGATTGATTTAATGATTGTGTTCTCTGAGGCAACTGTCTTTGCTGTTGTGGCTGTAGtagttgttgctgctgtggttgttgctgttgttgttgttgttgttgttgttgtgtacaGGGTGTGGcatttgttgattttgttgtgAGGGTTGAATCTGTGAAGGAGCTGGGCCTTGGCTAGGAGTCTGGGCATTGAGCCTGTCCAGCAGCTCCTTCTTTCTAACTCCAGCCTGCATCTGCCGTCGCATCTCCTTTCTCTTCAGGATCTCCTCTCTCAGACGCTTCTGTTCTTCAATCTTCAGACGGTACTGCCGTgtctcctcatcctcaacaGGGTCCTGTGGTGCCGTGCTGGACAGTGTGCTTGGGATTTCCTTGCGAAACACTGTCCTGCCTGCTCCCCCAGGCTGTGATTCGATCTTGGCAGCAACTTGGCCTCTTCCTCTGCCACCACCAGGCACCAGCTGAGTGTTCTGCCCAGGACGCACCCCCTGCGTTGCCTTGTCAACAGCCCTAACGTTGGCAGCGGGGCGGGCACTGTTCATGTTTGTGTTGCCAGGTGCTACAGGGAGCTCCCGGAGGTTGCTGTTACGCTGCTGCATTTGTTTGGAGACGGGTGGGTTC
>TU298630
CCACTCCTGAAAGTTTGACGACTCTGACTTTTGGTGGCACCTGCTGGTCTTCAAAACCAGAATTCTTGGCCCGCTGCATCACAGTTCTTTTAGTCCCAGGTATAGGTCCTTGAGTTGGAGCCTGAGCCTGGCCAGGGCCCACAGAGGGAGTTACAGGTATTATCTTTTGGGGGACCTGATTGGCTTGGATCTGAACACCAGGCATGTTAATGTTCTGCACAGCACTGTTTCTTCGCTGttgttgcagctgctgctgctgatgatttTGTTGAGGCGGTTTCCATTGCTGGTCTGGAACAGGCCCAGGGGTCTGTTGCTGCTGGGCACTACCTTTTACCATCTGCAGGCGTGTCTTGACATTGGGACGTGGTGTAGGGATCTGAGGAGTGCCGTTGGGCGGGATGGGGGTGGCTTGGTTAGAATTCTTTAATGATTGATTTAATGATTGTGTTCTCTGAGGCAACTGTCTTTGCTGTTGTGGCTGTAGtagttgttgctgctgtggttgttgctgttgttgttgttgttgttgttgttgtgtacaGGGTGTGGcatttgttgattttgttgtgAGGGTTGAATCTGTGAAGGAGCTGGGCCTTGGCTAGGAGTCTGGGCATTGAGCCTGTCCAGCAGCTCCTTCTTTCTAACTCCAGCCTGCATCTGCCGTCGCATCTCCTTTCTCTTCAGGATCTCCTCTCTCAGACGCTTCTGTTCTTCAATCTTCAGACGGTACTGCCGTgtctcctcatcctcaacaGGGTCCTGTGGTGCCGTGCTGGACAGTGTGCTTGGGATTTCCTTGCGAAACACTGTCCTGCCTGCTCCCCCAGGCTGTGATTCGATCTTGGCAGCAACTTGGCCTCTTCCTCTGCCACCACCAGGCACCAGCTGAGTGTTCTGCCCAGGACGCACCCCCTGCGTTGCCTTGTCAACAGCCCTAACGTTGGCAGCGGGGCGGGCACTGTTCATGTTTGTGTTGCCAGGTGCTACAGGGAGCTCCCGGAGGTTGCTGTTACGCTGCTGCATTTGTTTGGAGACGGGTGGGTTC

Function

symbol description
rbm33 Enables RNA binding activity.

NR:

description
PREDICTED: RNA-binding protein 33 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU298629 True 1512 lncRNA 0.53 4 18010783 18015252
TU298630 False 1051 lncRNA 0.53 2 18010783 18012258

Neighbor

gene id symbol gene type direction distance location
LOC120552245 NA coding downstream 166495 17751382 ~ 17844288 (-)
LOC120552246 dlgap1,LOC100706187,LOC106534655 coding downstream 258985 17727065 ~ 17751798 (-)
LOC120552712 NA coding downstream 294982 17713615 ~ 17715801 (-)
si:ch211-285f17.1 kiaa1217 coding downstream 298977 17592377 ~ 17711806 (-)
LOC120552117 LOC104943332 coding downstream 418491 17590394 ~ 17592292 (-)
shha shh,LOC102780316 coding upstream 9342 18024594 ~ 18033228 (-)
lmbr1 lmbr1,LOC102779560 coding upstream 82994 18098246 ~ 18132983 (-)
mnx1 mnx1 coding upstream 130043 18145295 ~ 18148100 (-)
ptprn2 ptprn2,LOC102778033 coding upstream 216214 18231466 ~ 18357998 (-)
ncapg2 ncapg2 coding upstream 344252 18359504 ~ 18374026 (-)
LOC120552218 NA non-coding downstream 38283 17939258 ~ 17972500 (-)
G220659 NA non-coding downstream 85826 17924571 ~ 17924957 (-)
G220665 NA non-coding downstream 100042 17910519 ~ 17910741 (-)
G220611 NA non-coding downstream 457820 17551760 ~ 17552963 (-)
LOC120551964 NA non-coding downstream 612548 17115230 ~ 17398235 (-)
G220685 NA non-coding upstream 5308 18020560 ~ 18021889 (-)
G220688 NA non-coding upstream 33764 18049016 ~ 18049484 (-)
G220695 NA non-coding upstream 51543 18066795 ~ 18103156 (-)
G220742 dnajb6 non-coding upstream 173472 18188724 ~ 18201518 (-)
G220732 dnajb6 non-coding upstream 192113 18207365 ~ 18214389 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 1135483 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 1215659 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 1726048 16266303 ~ 16284735 (-)
G220124 NA other downstream 1945562 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 2006019 16003879 ~ 16004764 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 411510 18426762 ~ 18483776 (-)
G220833 NA other upstream 594984 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 757725 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 923661 18938913 ~ 18949495 (-)
G221048 ankh other upstream 1300339 19315591 ~ 19326894 (-)

Expression


Co-expression Network