si:ch73-174h16.4 (LOC103364270,LOC104947970)


Basic Information

Item Value
gene id si:ch73-174h16.4
gene name LOC103364270,LOC104947970
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 18426762 ~ 18483776 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU298790
agtttttttttttttttttttttttattgttgggAGATAAGGTTTCCTCCTCCTGAAGGAACATGCagtttttaatatttgtttgcCAGACAAAAGGACACATGGAGGTGATTACATACAATAACCTCTAGTCCTTCGGGAGGACAGTGGTAAGCCATGCTACAATATAATGGTGCTATACTACTTTGATAAGTTCACTTGTTGAATGTATAAATGAAATTGTTGCATATGCTGGTTTTGTACCAAAAATTACTTTGGGCTTTATAATCAGATTAACAGGATAGTTGGAATACAACTATTATCATCCTTCTGTTTGAAGCAgtactttttttataaaaggcACTCATTCATATTCCGTATCTGATTACTTATTACATGTGCACACTACACGTCAACAACCAAAACTACAAGTTCGACAGTGGTTTCcttttacagtatgtgttgGCTAAGTATTTGCATAATTGTTCCTTAAACAGGAAATGAATGTAActacaaaatatattttaaatacataccAATTATTTGAGTATTGTACTTTGTCTTTGTGCTTTTCTAATTGACATATTTGCCATACTGTATTTCTTGAATAtctgttttaaaatgtcatgGATTGTGCTTTAATATATCTGTCCAACTTACTGTATATGTCAAGTCAAAGGTCAAAAATCACCTTTACAGGAAATGCGTGTACCAAATCACCCTCGTACCACATGAATGCATTTACATACTGTCAGTCACAAAATAAATCAGT
>XM_039790675.1
TCTAAAATGTAAACACTCCTCGCGCTCCAGCAGCAGCTTCCTCAGTGATAGTTTGTCGGGTTAGCTAACGTGATGTTTCCGCGTTTAATATTTTACCAGCGAAAGGTCACCAGCTTAGTTTATTACTGTTAATAATCCAAGTAGATCAGATGATGTTCTAAattcttttttggggctttacaAGACCGCATCAAATTACTGTCGTAAAGTTAATATTAGCTAGtttcagctagctagctctcagaCGTGTAGCCTGCTTCCTTGCAAAGGAATTGCACTCAGCATTATTTCGGCTGCTATATTTTTATGCTAAAAGCTCACCCTTCTTTGTGCTGATATGGTGCTTTCGTTGGTAAGCCTTTGTGCCAAGGAGGTGGTGAGTGACCACAGTTCGTCGCCCTGCTGGCTAAGGTGGGTGCCCAGGGAGCTGTACAGACCGCTGCTGGAGGCCTCTTTCGCCAGCTGCAGACCGCTGGCTGTTGGTGAACTGGTGCAGAGGTGGCCTGAACGCACACTGCGGGTCGGCAGACGCAGGAAACAAGGGCAAACTGGGCCAAATCGACTCTGCATCCAAGCTCTGTTACTTGCAGTTGTCAGAGGACTGTCGGACAAAAGGTGTGCCCTGCATGTACTGGACCTCTGTGGACTGCAAGGAGATGAAGGAGGGATGGGAGACCCCATGGGAGGATGGTCTCTGACTGTAGCTCTCTGCACCATGGTTGTTCAGGCCAGAGCTGGGGCACAGCGGGAGAGGAAAAGGTTCTCAGCTCTGGAGAGAGAAACGGATgtgaaaagagagaggggacagcggaagagagggaaggaaaaaAATGGCGACGATGAGGCAAGCACAGATAATAAGGAGCTGGGGGGAAATGACAGAGAGAGGATGGGATCATGTGGGACTCTGGGCGAAGAGGAGCTGATTAAAGGTGTCAGGAGGAGGATGGAgatagagaggaaaagagagattGCCATGACAGGTTTAGGTGGTAGTAGTATAAATGAGACTGAAGAAAAAGATGTAAACAGTGATGTGTTGGTGCATGTAAGAGCTGATCTTTTTGTAAATGCTCGCTCTTGGGAGCGTGTTCGCGGGGCTCTGAGTTCAATGGGACCCCTCAAGCTTCAGTGCAGATACCTACGTGTGGAAGAGATTTCAGTATCTAGTATCAGGACTCTGCTAGGCATGCTGCCTCGCCAGAGTCTTCTGGGCATTGATGTTCGCTACAGCAGCCTCGGGGTGGCTGGCTTGGCTGAGCTGCTGCCTCTTCTCTCCACCTTCCCAGCACTGAACTGTCTTCGCTTGCACTACTGTAACTTGGATTTTCGCGGAGACCAGCCTGGCCAGGAAGAGGCCCTGAGGGACTTGTCACAGGGTCTGACACAGCTGCAAGAACTGCGACGCCTCAGCCTCACTGCGCTGCGCCTGCCTGGACAACTCCGTGTGCTGCTTAGCTCACTGCCTCAGCCTCTAGAGATACTGGAGCTACCATATTTGAGCCTGAGCCCTGCTGACCTCGCCTATCTGTCCTGCAGCCATCATGCCTCCACACTGCAGCAGCTGGATCTAAGCGAGAACCATCTAGATGAGAACACCCTGACCTCTATTCGCCGCCTCCTCTCCCAGGCTTCCAGTAGCCTGCAGCACCTCTCTTTAAGTGGCTGCGGCATTACTGATGGCCTGCTGGGACTCTTGCTGCCCACACTGGGAGGCTGCAGGGCCCTCAAGAGCTTGGCTTTGGCCCTGAACCCACTCTCCATCGCAGGCCTCGTTGACCTGGTTAGGATGGCTGTGAGAATGCCCTCTCTCCGTCAGTTACTGTACCCCAACCCCCTGGAGGACTACCAGCCGGGCCTTCCTGACCTGCCCACCAGTGCTCAGCTCTTAGACTGGCCGCTGGATGAAGTCACAGACATCAACATTACCAGCAGCCAGCTCAACAGGGTGCTGATAGAGAGCGGGCGCACAGACCTCTTTCTGACATGCGACCTGCTCAATTATGACAAAGACTTGGTGGACTAGAGCAGAGGTGAAGGGGAAGGGAAGATGCTTTTTTTAGTTAGCTTGCCAACACATGTCAGAGCAATGTAGATATACCTGACAATGAAATTGTCACCCTAATAATTATCTAGTATTCAATTGTCTGTTTTTTATCTTTACTTAATCACAATCTGTCTCATGTATATTTCTCTTAAGGGTAGACAGAGTTAAGGGTGATGGGGGAGTTTGGGGGGGAATTCATTGTGTCACCGaagcaacagtttttttttttttttattgttgggAGATAAGGTTTCCTCCTCCTGAAGGAACATGCagtttttaatatttgtttgcCAGACAAAAGGACACATGGAGGTGATTACATACAATAACCTCTAGTCCTTCGGGAGGACAGTGGTAAGCCATGCTACAATATAATGGTGCTATACTACTTTGATAAGTTCACTTGTTGAATGTATAAATGAAATTGTTGCATATGCTGGTTTTGTACCAAAAATTACTTTGGGCTTTATAATCAGATTAACAGGATAGTTGGAATACAACTATTATCATCCTTCTGTTTGAAGCAgtactttttttataaaaggcACTCATTCATATTCCGTATCTGATTACTTATTACATGTGCACACTACACGTCAACAACCAAAACTACAAGTTCGACAGTGGTTTCcttttacagtatgtgttgGCTAAGTATTTGCATAATTGTTCCTTAAACAGGAAATGAATGTAActacaaaatatattttaaatacataccAATTATTTGAGTATTGTACTTTGTCTTTGTGCTTTTCTAATTGACATATTTGCCATACTGTATTTCTTGAATAtctgttttaaaatgtcatgGATTGTGCTTTAATATATCTGTCCAACTTACTGTATATGTCAAGTCAAAGGTCAAAAATCACCTTTACAGGAAATGCGTGTACCAAATCACCCTCGTACCACATGAATGCATTTACATACTGTCAGTCACAAAATAAATCAGTCAAAAAGCTTTGAAGAAAA

Function

NR:

description
leucine-rich repeat-containing protein 14-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU298790 False 751 lncRNA 0.32 2 18426781 18483776
XM_039790675.1 True 3025 mRNA 0.47 3 18426762 18430468

Neighbor

gene id symbol gene type direction distance location
esyt2b esyt2 coding downstream 18837 18374720 ~ 18407925 (-)
ncapg2 ncapg2 coding downstream 52736 18359504 ~ 18374026 (-)
ptprn2 ptprn2,LOC102778033 coding downstream 68764 18231466 ~ 18357998 (-)
mnx1 mnx1 coding downstream 278662 18145295 ~ 18148100 (-)
lmbr1 lmbr1,LOC102779560 coding downstream 293779 18098246 ~ 18132983 (-)
LOC120552023 LOC103373088 coding upstream 129374 18613150 ~ 18617399 (-)
chmp4c chmp4c,LOC107086476,LOC106961905 coding upstream 133889 18617665 ~ 18620964 (-)
trnar-ccg_3 NA coding upstream 140950 18624726 ~ 18624798 (-)
arl8 arl5b,LOC103373092,LOC100708858,LOC106590131 coding upstream 156481 18640257 ~ 18648625 (-)
cacnb2a cacnb2 coding upstream 175501 18659277 ~ 18728599 (-)
G220732 dnajb6 non-coding downstream 212373 18207365 ~ 18214389 (-)
G220742 dnajb6 non-coding downstream 225244 18188724 ~ 18201518 (-)
G220695 NA non-coding downstream 323606 18066795 ~ 18103156 (-)
G220688 NA non-coding downstream 377278 18049016 ~ 18049484 (-)
G220685 NA non-coding downstream 404873 18020560 ~ 18021889 (-)
G220839 zfand1 non-coding upstream 138915 18622691 ~ 18623385 (-)
G220860 NA non-coding upstream 256641 18740417 ~ 18740616 (-)
G220888 NA non-coding upstream 332130 18815906 ~ 18816378 (-)
G220893 NA non-coding upstream 345975 18829751 ~ 18829985 (-)
G220972 NA non-coding upstream 556489 19040265 ~ 19043216 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 1551462 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 1631638 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 2142027 16266303 ~ 16284735 (-)
G220124 NA other downstream 2361541 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 2421998 16003879 ~ 16004764 (-)
G220833 NA other upstream 126460 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 289201 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 455137 18938913 ~ 18949495 (-)
G221048 ankh other upstream 831815 19315591 ~ 19326894 (-)
LOC120552536 fbxl7 other upstream 2351402 20835178 ~ 20862688 (-)

Expression


Co-expression Network