G220972


Basic Information

Item Value
gene id G220972
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 19040265 ~ 19043216 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU299030
ATTTCAGTTGTCATTTATGGAAGTGAAACAGTCAGCAAAATACAACTTGATAGAAGACTTTATTTAGAAAGTTTatattataaaatgtaaaaattcaaCTAAACCTGATCAAATGAATAGCAAAGACTTATCCCTTAGAGTTTCCAAGATGCTGCCACCTCACATCTTTTCATGAAAGGAAAAAGCATTTTTACAACCAATTACATTTTTCCTTCTCATTAGAGGTGTGTACATTTGGCAGTACTGGAAGTTCACAGCAAACAGTGGATAGTTATTGCTTTGGTTTGTTTAAAATTGGGTTTATATTGGAGAGTTGAGACATGCAGCATGGTGATCTAACTGACGGAAGAGGCGAACAGGCTGAAAGTGGCTCTTTAATCGTCCTTGTCCTTGGCACCATGCTTTAGGATGCGTGTGAACTCCACGTAGTTGAAGTTGCTTTTCTTGTCGATCGGGGCCTCCCTGAAGAGCTCGTCCACCTCCTCATCTGTAAAGCGGTCACCCATTGTTGTGAGCAGCTCTCTGAGGTATTCTTCCTGGATGACACCTGAGGGTCAAAATCAGATAAGGTTTACAGAATAAACATTGTCCTGAAGAATTTTCTTTTGCTTGCAATGATAGCATTACCATCTTTGAGAAACCATTTGACTTGAAGCTGGATTGTTTTAGGCAAGGTAACTATCTGTCAAATATAGCtgtaattcaaagtgcttttataaaaaaaaaaataaaaataaaaaaaaaattggaacaaaaaacaaaacaagcaaagtaAAATTCACATCTTATTTTAAGGCTCAGAGAGGAAAATGGCCAGGTATTTATTAGGGCAAACTAGGATTCTTGTGTGTATAACAGGAAAGAAATTACAACTGTCAAAATGTACCTGTCCCCTCCTCATCGAAGCAAGCAAATGCATTCCTGATCACATCCTCAGGGTCTGTGCCATTGAGCTTCTCCCCAAACATGGTGAGGAACATGGTGAAGTTAATGGGTCCAGGAGCTTCCATCATCATGGCCTCCAGGTACTCATCAGTTGGATTTTtccctattaaaaaaaaataaaataaaaagacggGTATATGCACTTAGTCTGAAGGGTTTCGAGTACAGAAGTGACATTAACAACTGATGAAACTAGTTTAAAAACAGCAAACTGGAAAGAGATGTAGGTGCAGACCAGCATGAGTTAAGTGCATAACCGCTAACAGTTTACAGACTTGTTGGTTCAGCTCATCCTGAAGTAAAAACAGACTAAAGAGACTCTTCTACTTACCCAGTGAGGCCAGCATGTCGTGAAGGTCCTCTTTGTCCACAAACCCATCACGGTTTTGGTCAATCATGTTAAAGGCCTCCTTGAACTCCTGAATCTGAGACTGGTCAAACATGGCGAAGACATTGGAAGTTGCACGCTGAGGGCGCTTCTTCGTGGTCTTTCCCTTTGCTCTTTTGctagacattttgacttttttttttTACCTGACAACAACCCGATACTTGTCAGCTAGCCCGATGCTGCTCTTTTTCTCAACCACCGCCCTTCACTTCCTG
>TU299031
ATTTCAGTTGTCATTTATGGAAGTGAAACAGTCAGCAAAATACAACTTGATAGAAGACTTTATTTAGAAAGTTTatattataaaatgtaaaaattcaaCTAAACCTGATCAAATGAATAGCAAAGACTTATCCCTTAGAGTTTCCAAGATGCTGCCACCTCACATCTTTTCATGAAAGGAAAAAGCATTTTTACAACCAATTACATTTTTCCTTCTCATTAGAGGTGTGTACATTTGGCAGTACTGGAAGTTCACAGCAAACAGTGGATAGTTATTGCTTTGGTTTGTTTAAAATTGGGTTTATATTGGAGAGTTGAGACATGCAGCATGGTGATCTAACTGACGGAAGAGGCGAACAGGCTGAAAGTGGCTCTTTAATCGTCCTTGTCCTTGGCACCATGCTTTAGGATGCGTGTGAACTCCACGTAGTTGAAGTTGCTTTTCTTGTCGATCGGGGCCTCCCTGAAGAGCTCGTCCACCTCCTCATCTGTAAAGCGGTCACCCATTGTTGTGAGCAGCTCTCTGAGGTATTCTTCCTGGATGACACCTGACCCTCCTCATCGAAGCAAGCAAATGCATTCCTGATCACATCCTCAGGGTCTGTGCCATTGAGCTTCTCCCCAAACATGGTGAGGCCAGCATGTCGTGAAGGTCCTCTTTGTCCACAAACCCATCACGGTTTTGGTCAATCATGTTAAAGGCCTCCTTGAACTCCTGAATCTGAGACTGGTCAAACATGGCGAAGACATTGGAAGTTGCACGCTGAGGGCGCTTCTTCGTGGTCTTTCCCTTTGCTCTTTTGctagacattttgacttttttttttTACCTGACAACAACCCGATACTTGTCAGCTAGCCCGATGCTGCTCTTTTTCTCAACCACCGCCCTTCACTTCCTG
>TU299033
ATTTCAGTTGTCATTTATGGAAGTGAAACAGTCAGCAAAATACAACTTGATAGAAGACTTTATTTAGAAAGTTTatattataaaatgtaaaaattcaaCTAAACCTGATCAAATGAATAGCAAAGACTTATCCCTTAGAGTTTCCAAGATGCTGCCACCTCACATCTTTTCATGAAAGGAAAAAGCATTTTTACAACCAATTACATTTTTCCTTCTCATTAGAGGTGTGTACATTTGGCAGTACTGGAAGTTCACAGCAAACAGTGGATAGTTATTGCTTTGGTTTGTTTAAAATTGGGTTTATATTGGAGAGTTGAGACATGCAGCATGGTGATCTAACTGACGGAAGAGGCGAACAGGCTGAAAGTGGCTCTTTAATCGTCCTTGTCCTTGGCACCATGCTTTAGGATGCGTGTGAACTCCACGTAGTTGAAGTTGCTTTTCTTGTCGATCGGGGCCTCCCTGAAGAGCTCGTCCACCTCCTCATCTGTAAAGCGGTCACCCATTGTTGTGAGCAGCTCTCTGAGGTATTCTTCCTGGATGACCTGTCCCCTCCTCATCGAAGCAAGCAAATGCATTCCTGATCACATCCTCAGGGTCTGTGCCATTGAGCTTCTCCCCAAACATGGTGAGGAACATGGTGAAGTTAATGGGTCCAGGAGCTTCCATCATCATGGCCTCCAGGTACTCATCAGTTGGATTTTtccctattaaaaaaaaataaaataaaaagacggGTATATGCACTTAGTCTGAAGGGTTTCGAGTACAGAAGTGACATTAACAACTGATGAAACTAGTTTAAAAACAGCAAACTGGAAAGAGATGTAGGTGCAGACCAGCATGAGTTAAGTGCATAACCGCTAACAGTTTACAGACTTGTTGGTTCAGCTCATCCTGAAGTAAAAACAGACTAAAGAGACTCTTCTACTTACCCAGTGAGGCCAGCATGTCGTGAAGGTCCTCTTTGTCCACAAACCCATCACGGTTTTGGTCAATCATGTTAAAGGCCTCCTTGAACTCCTGAATCTGAGACTGGTCAAACATGGCGAAGACATTGGAAGTTGCACGCTGAGGGCGCTTCTTCGTGGTCTTTCCCTTTGCTCTTTTGctagacattttgacttttttttttTTACCTGACAACAACCCGATACTTGTCAGCTAGCCCGATGCTGCTCTTTTTCTCAACCACCGCCCTTCACTTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299030 True 1551 lncRNA 0.40 2 19040265 19043216
TU299031 False 901 lncRNA 0.43 4 19040265 19043216
TU299033 False 1211 lncRNA 0.42 3 19040265 19043216

Neighbor

gene id symbol gene type direction distance location
myom1b myom1,LOC100698284,LOC102794243 coding downstream 3432 19006643 ~ 19036833 (-)
LOC120552316 lpin2 coding downstream 35100 18989181 ~ 19005165 (-)
LOC120552191 yes1 coding downstream 186649 18831587 ~ 18853616 (-)
enosf1 enosf1 coding downstream 213383 18821982 ~ 18826882 (-)
LOC120551921 tmem236,LOC104961611,LOC102297878 coding downstream 277419 18756353 ~ 18762846 (-)
chmp5b chmp5,LOC104949656,LOC108230516 coding upstream 11044 19054260 ~ 19058076 (-)
LOC120552750 oprk1,LOC104949654,LOC103363868 coding upstream 16491 19059707 ~ 19065576 (-)
LOC120552400 NA coding upstream 25947 19069163 ~ 19070616 (-)
lypla1 lypla1 coding upstream 68980 19112196 ~ 19118982 (-)
LOC120552661 esco1,LOC102306999,LOC105019393,LOC107732058,LOC107599690 coding upstream 138834 19182050 ~ 19195523 (-)
G220893 NA non-coding downstream 210280 18829751 ~ 18829985 (-)
G220888 NA non-coding downstream 223887 18815906 ~ 18816378 (-)
G220860 NA non-coding downstream 299649 18740417 ~ 18740616 (-)
G220839 zfand1 non-coding downstream 416880 18622691 ~ 18623385 (-)
LOC120552692 NA non-coding downstream 462188 18472125 ~ 18578077 (-)
LOC120552156 NA non-coding upstream 273438 19316654 ~ 19317227 (-)
G221086 NA non-coding upstream 329375 19372591 ~ 19374516 (-)
G221088 NA non-coding upstream 393750 19436966 ~ 19439539 (-)
G221090 NA non-coding upstream 402829 19446045 ~ 19446294 (-)
G221095 LOC102309907,LOC101472733,LOC102788342,LOC101061645,LOC104929597 non-coding upstream 474156 19517372 ~ 19544392 (-)
mettl4 mettl4 other downstream 90770 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 229321 18772977 ~ 18810944 (-)
G220833 NA other downstream 342295 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 556489 18426762 ~ 18483776 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 2164965 16874649 ~ 16875300 (-)
G221048 ankh other upstream 272375 19315591 ~ 19326894 (-)
LOC120552536 fbxl7 other upstream 1791962 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 2174464 21217680 ~ 21221667 (-)
tfr1b NA other upstream 2946801 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 3071166 22114382 ~ 22120611 (-)

Expression


Co-expression Network