G221095 (LOC102309907,LOC101472733,LOC102788342,LOC101061645,LOC104929597)


Basic Information

Item Value
gene id G221095
gene name LOC102309907,LOC101472733,LOC102788342,LOC101061645,LOC104929597
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 19517372 ~ 19544392 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU299191
atttttttttttTTCAAAGCTtcaaatcatttattttgttcTCTGAACAATTCACATTTTAACCAAAGTTTACCATCCATTTCTACAGCTTCTTTTGGATTTAACATTAACACAGGAATCCTCACTTAAACAAATCTTTTGTCACTACACaaaaattgcattttaccaaacaaaacaaaaacagccacACCACATTTTACTGGTAAACTAACAAAATTATTTACACACTTTGGCTTTGTGGAGCGGTTTTGACCCATGGTCCTTCACCACCGACTTGATGACTCCTACAGCAACTGTTTGCTTCAGGTCTCTAGCTGCAAAGCGACCTAGGGAGGGTATGTGAAGAAGCTCTCCACACACATGGGCTTGATGGGAACCATTTTGATTGTAGCAGCATCTCCAGACATCAGGACCTGCGGCTGGTCCTCCAGTTTATTGCCTGTGCGCCGGTCAATCTTCTCCTTCAGCTCAGCAAAGCGACAGGTTACATGGGCGGTGTGACAGTCCAGGACAGGAGAGTAGCCAGCTTTCACCTTCCCTGGATGGTTCAGGATGATCACCTAAAGACAAAAACTCA

Function

NR:

description
PREDICTED: elongation factor 1-alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299191 True 577 lncRNA 0.42 3 19517372 19544392

Neighbor

gene id symbol gene type direction distance location
fam49bb fam49b,LOC104954579,LOC105915818,LOC103377397,LOC107085391 coding downstream 3335 19475880 ~ 19514037 (-)
ankha ankh coding downstream 186818 19315583 ~ 19330554 (-)
vps41 vps41 coding downstream 303720 19196583 ~ 19213652 (-)
LOC120552661 esco1,LOC102306999,LOC105019393,LOC107732058,LOC107599690 coding downstream 321849 19182050 ~ 19195523 (-)
lypla1 lypla1 coding downstream 398390 19112196 ~ 19118982 (-)
chpf2 chpf2 coding upstream 95464 19639856 ~ 19648801 (-)
si:ch73-173p19.1 LOC103363515,LOC104954586 coding upstream 114497 19658889 ~ 19666720 (-)
kif9 NA coding upstream 345290 19889682 ~ 19908076 (-)
cdv3 cdv3 coding upstream 405589 19949981 ~ 19954961 (-)
tmem108 LOC107589950 coding upstream 413892 19958284 ~ 19999250 (-)
G221090 NA non-coding downstream 71078 19446045 ~ 19446294 (-)
G221088 NA non-coding downstream 77833 19436966 ~ 19439539 (-)
G221086 NA non-coding downstream 142856 19372591 ~ 19374516 (-)
LOC120552156 NA non-coding downstream 200145 19316654 ~ 19317227 (-)
G220972 NA non-coding downstream 474156 19040265 ~ 19043216 (-)
G221138 NA non-coding upstream 56314 19600706 ~ 19600939 (-)
G221143 abcf2 non-coding upstream 107962 19652354 ~ 19656460 (-)
G221146 NA non-coding upstream 125312 19669704 ~ 19669954 (-)
G221149 NA non-coding upstream 134676 19679068 ~ 19730782 (-)
G221160 NA non-coding upstream 174056 19718448 ~ 19719622 (-)
G221048 ankh other downstream 190478 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 567877 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 706428 18772977 ~ 18810944 (-)
G220833 NA other downstream 819402 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 1033596 18426762 ~ 18483776 (-)
LOC120552536 fbxl7 other upstream 1290786 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 1673288 21217680 ~ 21221667 (-)
tfr1b NA other upstream 2445625 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 2569990 22114382 ~ 22120611 (-)
smpx smpx other upstream 2658375 22202767 ~ 22218381 (-)

Expression


Co-expression Network