G221182


Basic Information

Item Value
gene id G221182
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 19808752 ~ 19811135 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU299310
GGATTTGTCACAATTAATGAAATTTCAGACATAACCATCATGTCACAATTTGTTTATTGTCATGTATTTAATTGCCATAGCTACAATATTTAACAAAGGTTTAAGTAGAACACATCCAAATGCAAATTCATTCTACAGATTCACGGGAAAAGAAGTaatttttacataaaataaaacagatatggatatatattttttatgttaacaTTCATTTTCTTGGTCAGGTCTCCTCTGGAACCAAACTGTGACTGACAAAGGCAAAAGTTTTGAATCGTTGCAGGCTATTAAGACATGCAGCTTACTAGATCAAATGAGAGCAATAGTGGCACTGCTCTCTAAAAGTAAACCCCTTTAATAGCCACAAATAAATATGTACACCACAGCCCACAGTTGGCGAGTGTCTGGGAGAATTCAGGGCTCCTGTTTTCAGAGACACACTGATAAGAAGGCTTGACACAGAGTAGAGTAAGTAAGTACTGTATGCAATGACATCGATTGAAACCTCGACCGTAAAGACCCGGGAAAAAAATGAAGCAGAGCTAAATGAGTTCGACAAAGAAGAGTACACGGCTGAAGATCGATCCGACAAttcattattgtttttgttttgtttttgctgtccagttttgtaaagaaaagaaatccaCCCAAATGGTAGTCTTCTTTTACGGTGCCAAGACTGGATTCTTTACAAGAAAATCTGGCAGAGCTGAAGGGCTGCAttctatttttgtgtttgtgtgggctGCAGTGCAATAAATCCCAAAGTTCACACTGTAATTGTCTAAAATAGTAGATCTGATACTGGGAAAAGAACATGTTCAAAGCAGAATATTCCTCTCTTTTATCAGAGATTCTGTTTTATCTCCTGCAGCCCATGGAAACCTCCAGAGGTTAGCAATGTTATCGATTACATAAAAGTCAAAATGCTAAACCATACATTCTTAAAGATTTTTGAGTagattttcttcttttaaaacaCCTATTAACACTAAACAAGTTCAGTGTTAGAAAATATCCTCAGATGGTTTAAGAAATACCGCAAAAATAAGTATAGCAGTAATATCAGCAATATGGCAAGTTTTGTTAAGTCTTAAGATCACATCACCAACACCATTCATCCCATTTATACAGGACTGTGATTTTTACTTCACAAGCTTCCCGTGATGTATTCCAATTTTTGTACATGAGCTGCAGTTCTTGAGTATTTTAATTGACTGCAGCAGAGAGCTTATCAAAGGTTTCAGCTCTTAATGGAGCTGCCATTACTGGGTGTCAAGCTCATCTTCACATTCACATTGACTATGTGGACTCGTGATAAGACACAGGAACTAGTATGAATCAATGCATCTGGATTTAAAACTAAAAGTCAGCCTGAATTAGTTAAATTACAAATTGCTAAATTGGGTATGACACGGTTTCATTAGGAAATTTTGTCCAAAGTACATTGCCATATCAGGCACTTTGCAAGTCTTTGGCTTTCAGAACACTTTCACAGGGAAAACCCTTAAGAGCACTACAGGCTAATAGAGAGGCATCATCTCATTGCTCGTCACTACATTTAGGCATGGTGTGTTTAGAAGAAGCAGACTTTGATCCAAGAGTGCAGTGAGGTGTGTTAACTTTGCACGTCATAaaaagcacataaaaaaaaaaaaaatacaggctCGTGTAAAGCTTCTATTGTTCACAGttcaacagaaataaataagtCAACTGAATGAGTATTAACAGTGCATGTTGGACGGAATATTAAATTTTAATGGGGTTCTGGCTTGTAAGGGACAGGGGCTTTAGTAAATTACTTTGATTACAATTATAAGTAAATAATCACCAATCAAAGTGGACACTGGAGTGCAAACAAGCAATGAAACGTCCTTCTGAAAACACAGCTGCTGCATTTGTAAGTAAAACATATACGTTCTGAATAGTGGTATTATGGAAAAGTTGTCAATATATCTTAAGGCATGATAGCCCTCTTTAGCAGGGAGTTTAAAAATCTTCCACTGCTTCGTGGGATTGCTGAACACAGCAATGATGCCTCTGGCCCTCTAACCAGAGGTGCCTTCGGTTTCTTTCTCAGCGCTGGTGTTTCTTCGTTGTCTCTAGGATGATTTACTGACTGTCCCAGCCCAGCATCCTTCTGTATTTGTCCTCTTTTTGATCCCCAGCTGGGTCAGCTCCTTTCCCGGCTGTGTCATACTGTCCGCTGCCCTCTCCATTTCTTGATCTGTGTGGTCAAGGCCCGAGCCCCTCTATCTGGGCCAGTCGCTGTCGTGACCCCTCCTCATTGTGTGCTCCCAGAGGCGAGCGCTTTGACCCGGTGACGGCTGATGGCGTCCTCCAGGAACACTGCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299310 True 2360 lncRNA 0.39 2 19808752 19811135

Neighbor

gene id symbol gene type direction distance location
si:ch73-173p19.1 LOC103363515,LOC104954586 coding downstream 142032 19658889 ~ 19666720 (-)
chpf2 chpf2 coding downstream 159951 19639856 ~ 19648801 (-)
asap1b asap1 coding downstream 223304 19518530 ~ 19585448 (-)
fam49bb fam49b,LOC104954579,LOC105915818,LOC103377397,LOC107085391 coding downstream 294715 19475880 ~ 19514037 (-)
ankha ankh coding downstream 478198 19315583 ~ 19330554 (-)
kif9 NA coding upstream 78547 19889682 ~ 19908076 (-)
cdv3 cdv3 coding upstream 138846 19949981 ~ 19954961 (-)
tmem108 LOC107589950 coding upstream 147149 19958284 ~ 19999250 (-)
topbp1 topbp1 coding upstream 191321 20002456 ~ 20018989 (-)
LOC120552713 dnajc13 coding upstream 208998 20020133 ~ 20055209 (-)
LOC120551913 NA non-coding downstream 54244 19724099 ~ 19754508 (-)
G221150 NA non-coding downstream 57458 19750105 ~ 19751294 (-)
G221149 NA non-coding downstream 77970 19679068 ~ 19730782 (-)
G221160 NA non-coding downstream 89130 19718448 ~ 19719622 (-)
G221146 NA non-coding downstream 138798 19669704 ~ 19669954 (-)
G221183 puf60 non-coding upstream 2935 19814070 ~ 19818115 (-)
G221287 tmx3,LOC102777948 non-coding upstream 357546 20168681 ~ 20262155 (-)
G221293 pxdc1,LOC104939983 non-coding upstream 396603 20207738 ~ 20213258 (-)
G221359 NA non-coding upstream 658011 20469146 ~ 20469453 (-)
G221385 NA non-coding upstream 756424 20567559 ~ 20567784 (-)
G221048 ankh other downstream 481858 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 859257 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 997808 18772977 ~ 18810944 (-)
G220833 NA other downstream 1110782 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 1324976 18426762 ~ 18483776 (-)
LOC120552536 fbxl7 other upstream 1024043 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 1406545 21217680 ~ 21221667 (-)
tfr1b NA other upstream 2178882 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 2303247 22114382 ~ 22120611 (-)
smpx smpx other upstream 2391632 22202767 ~ 22218381 (-)

Expression


Co-expression Network