G221537 (LOC104942383)


Basic Information

Item Value
gene id G221537
gene name LOC104942383
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 21190892 ~ 21231621 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU299765
taaaatatttttatttaactagTAAAACGCCCATTTCAAAAATAGAATGACAACAACGTATACTCATGGAACGGCCCGAACAATGATTGGCATAAGGCGTTTTCTTTATGTTAATTACAATCTTTCTTTTTGCCAAGCTTTTCTATTGTTTTATTGCGTATAGGGCTAAAACCAGAGGTCTTTTGTTAATTTTGCTCCTTTACAGGGCATGACACCAGGCTAACACTATAATCTGATCTGTTGACAGGTTCTTTTCTTACTAGGCTTCCTTGGCAGGGTAATTTATTCCTTGGCTTTGTGTATTAGCCACTATGGCTTAGCCCACAAGGCTACTGTGCGTTTTAAGCTTTAGCACTCGACACAAAGGGTTTTCAAAACAACACATGAAGGGATTTTCTTTACACATcacatttcattttgaaaagGAGGATAATTCCTCTCTATTGCTATATTATCAGGGAATCTGCAAAAATGCAGATTTTGGTTACAAAACATTATTTAGGAATCACTTAAGTCTTATTTTGCATAAGATAGCAAgctacaaaaacaaatacataatcCAAAATACTAAGAACACACAACATGGGATAACATGAAACATGAAAGATTTAAAGATTAGGCTGTAAATACAGAAATAAGCCATTGTCATGATATTCAGTATCTAGCACTAGCAGTAGCCTGTCCTTGTGCCCTTTGTTGCTGTACACTGAATTCAAATCAATAAGCAGGTCAGCGCCTATAGGCATCGTGTCTGCATGAGACTGTGCGtgccatgttgtgtgtgtgcatgtgtgccagAGGGGGATTTTCTGAGTCAATCGGTTGTGATGGAGGCGGCTGCAGCGTTTCATTAAGCTGCTGTGATGCAGAGGCTGGCAGTCAGTCAGAGATTACAGGCAGACTGGCAGTGGGATTGTATGTgtcctgtttgtctgtgtgtgcatcttaCCTCCCTCACAGATGGTGATGTAGTTTCATCCTCCCCCCTGCCTACTGCAAATAGCTTGTGGTTTCTGCATTCTGCTGGCTCGAAAGCACCATTTTGACACAAAGAAGACCTACACACACCCGTGTAATGTCTCTGAAAACATTGGCACCAGATGCAGCTTGTCTTATAGAATAAATTATGACAGGGCATCTTTGCTGGCTTATTACACACATAGAAATAGAGATTCCTGCAAGTGCTTCTCTCTCATTTATAGACTGCCCAGTGTCAAAAGCAATGGGTCACAGGaatttcatttcttttaaaaatttGATGGAGTATGTGTGTGCTTTATGGCTCACTGCAAAGAGAGGTAACTCTGAAtaaagggagggggagagggcaACAGGGCAGAGAGTGCAAAAAGGACTGAAGGGGGTATTACTGGAAGGAAGCACGGACAGAGCGACCCTTGAGAGGCTGGGGAGGGCGGTAGTTGTCCACCATACAGCACTCGGGCTCACCATCACCGGAGAAGAGCAGGCTGCGGAATTTGGCCATCTGGTCAGCGCTGACACTGATTGGCTCTTTGCAGACAATCCAGGTAACGCTCTCCAGCAGAGGAGGTGTGGTTAGGGAGCCATCATATGTCCAGTAGTCTAGGCAACCAGGGAGCAAGGTGGAAGGGTCAAAGCCACCAAAAGTGGTCTGCTGGCCTTTGGCCTTGATATCTTTAAAGGCGTCAATAATCTTCTGAAGACTGGCATTTGGACCACCAATCTTCAGGAATACTCCAACAACAGCAAGCCCATCAGGCTTGCTAGCAGCCTCACCAAAACTTGCGTATTTGGTGTTCCAGTGCACCAGATGGAGCTCAGCAGGATACTTGGTCCCGTTCACAGTATGTTCGGAGCCCTTGTCATCAGAAGCTCCCCAGTGGAAATGAAACTGCTTGAGCCTGTAGGTCCCTGAGATGGGGCCGTCTTTCAGAGTTGAGCTGTCGGTGTCATCTGCGAAGGTCACTTGGAAGGAATGTCCGTTGTTGAGGATTTCGAGGCAGGTGGACGGGTCGTACTTCAGGCTGAGCGGCTTCAGCCCCTTGTCGTATGATGATGCACCAGAGACGATGTCAATGGGAGACTGGCGGGGTCCATTGGCAATAGGGAAGTTATCAGCCCATTTGTCGGGTCCGTTGTTCTTTTCGTATCCCCAAGACATGGTAACAGTTTTGGATCTATGAGTATGTAGAGCTGTAATTCCCTAAAGCGAGTCGTTCCTCAGCGCAAAGCAGCTAGTGTCCTCCACCTGACAGCTGCAGACCTTATATAGGGTCCCCTgtgagcggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcgggctGGTGTTAGCCACATGATGTCCGCA
>TU299766
taaaatatttttatttaactagTAAAACGCCCATTTCAAAAATAGAATGACAACAACGTATACTCATGGAACGGCCCGAACAATGATTGGCATAAGGCGTTTTCTTTATGTTAATTACAATCTTTCTTTTTGCCAAGCTTTTCTATTGTTTTATTGCGTATAGGGCTAAAACCAGAGGTCTTTTGTTAATTTTGCTCCTTTACAGGGCATGACACCAGGCTAACACTATAATCTGATCTGTTGACAGGTTCTTTTCTTACTAGGCTTCCTTGGCAGGGTAATTTATTCCTTGGCTTTGTGTATTAGCCACTATGGCTTAGCCCACAAGGCTACTGTGCGTTTTAAGCTTTAGCACTCGACACAAAGGGTTTTCAAAACAACACATGAAGGGATTTTCTTTACACATcacatttcattttgaaaagGAGGATAATTCCTCTCTATTGCTATATTATCAGGGAATCTGCAAAAATGCAGATTTTGGTTACAAAACATTATTTAGGAATCACTTAAGTCTTATTTTGCATAAGATAGCAAgctacaaaaacaaatacataatcCAAAATACTAAGAACACACAcacacacacacacacg
>TU299767
taaaatatttttatttaactagTAAAACGCCCATTTCAAAAATAGAATGACAACAACGTATACTCATGGAACGGCCCGAACAATGATTGGCATAAGGCGTTTTCTTTATGTTAATTACAATCTTTCTTTTTGCCAAGCTTTTCTATTGTTTTATTGCGTATAGGGCTAAAACCAGAGGTCTTTTGTTAATTTTGCTCCTTTACAGGGCATGACACCAGGCTAACACTATAATCTGATCTGTTGACAGGTTCTTTTCTTACTAGGCTTCCTTGGCAGGGTAATTTATTCCTTGGCTTTGTGTATTAGCCACTATGGCTTAGCCCACAAGGCTACTGTGCGTTTTAAGCTTTAGCACTCGACACAAAGGGTTTTCAAAACAACACATGAAGGGATTTTCTTTACACATcacatttcattttgaaaagGAGGATAATTCCTCTCTATTGCTATATTATCAGGGAATCTGCAAAAATGCAGATTTTGGTTACAAAACATTATTTAGGAATCACTTAAGTCTTATTTTGCATAAGATAGCAAgctacaaaaacaaatacataatcCAAAATACTAAGAACACACAACATGGGATAACATGAAACATGAAAGATTTAAAGATTAGGCTGTAAATACAGAAATAAGCCATTGTCATGATATTCAGTATCTAGCACTAGCAGTAGCCTGTCCTTGTGCCCTTTGTTGCTGTACACTGAATTCAAATCAATAAGCAGGTCAGCGCCTATAGGCATCGTGTCTGCATGAGACTGTGCGtgccatgttgtgtgtgtgcatgtgtgccagAGGGGGATTTTCTGAGTCAATCGGTTGTGATGGAGGCGGCTGCAGCGTTTCATTAAGCTGCTGTGATGCAGAGGCTGGCAGTCAGTCAGAGATTACAGGCAGACTGGCAGTGGGATTGTATGTgtcctgtttgtctgtgtgtgcatcttaCCTCCCTCACAGATGGTGATGTAGTTTCATCCTCCCCCCTGCCTACTGCAAATAGCTTGTGGTTTCTGCATTCTGCTGGCTCGAAAGCACCATTTTGACACAAAGAAGACCTACACACACCCGTGTAATGTCTCTGAAAACATTGGCACCAGATGCAGCTTGTCTTATAGAATAAATTATGACAGGGCATCTTTGCTGGCTTATTACACACATAGAAATAGAGATTCCTGCAAGTGCTTCTCTCTCATTTATAGACTGCCCAGTGTCAAAAGCAATGGGTCACAGGaatttcatttcttttaaaaatttGATGGAGTATGTGTGTGCTTTATGGCTCACTGCAAAGAGAGGTAACTCTGAAtaaagggagggggagagggcaACAGGGCAGAGAGTGCAAAAAGGACTGAAGGGGGTATTACTGGAAGGAAGCACGGACAGAGCGACCCTTGAGAGGCTGGGGAGGGCGGTAGTTGTCCACCATACAGCACTCGGGCTCACCATCACCGGAGAAGAGCAGGCTGCGGAATTTGGCCATCTGGTCAGCGCTGACACTGATTGGCTCTTTGCAGACAATCCAGGTAACGCTCTCCAGCAGAGGAGGTGTGGTTAGGGAGCCATCATATGTCCAGTAGTCTAGGCAACCAGGGAGCAAGGTGGAAGGGTCAAAGCCACCAAAAGTGGTCTGCTGGCCTTTGGCCTTGATATCTTTAAAGGCGTCAATAATCTTCTGAAGACTGGCATTTGGACCACCAATCTTCAGGAATACTCCAACAACAGCAAGCCCATCAGGCTTGCTAGCAGCCTCACCAAAACTTGCGTATTTGGTGTTCCAGTGCACCAGATGGAGCTCAGCAGGATACTTGGTCCCGTTCACAGTATGTTCGGAGCCCTTGTCATCAGAAGCTCCCCAGTGGAAATGAAACTGCTTGAGCCTGTAGGTCCCTGAGATGGGGCCGTCTTTCAGAGCTGCAGAACAAACACAAATCTCCCATCAGTTCATCCCACACCAGTCGTGGGTAG

Function

NR:

description
PREDICTED: carbonic anhydrase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299765 True 2339 lncRNA 0.46 7 21224549 21231621
TU299766 False 596 lncRNA 0.35 2 21190892 21231621
TU299767 False 1971 lncRNA 0.44 5 21227053 21231621

Neighbor

gene id symbol gene type direction distance location
zgc:111976 NA coding downstream 317940 20864843 ~ 20872952 (-)
LOC120552480 LOC103356684 coding downstream 432098 20747747 ~ 20758794 (-)
LOC120551976 LOC100696589,LOC106947338,LOC106912688,LOC104946573,LOC103147557,LOC103456804 coding downstream 449499 20735026 ~ 20741393 (-)
LOC120552510 cdh7 coding downstream 458641 20572208 ~ 20732251 (-)
prpf4bb prpf4b coding downstream 1000386 20179556 ~ 20190506 (-)
pks1 NA coding upstream 61163 21292784 ~ 21300494 (-)
LOC120552199 yme1l1 coding upstream 72168 21303789 ~ 21312913 (-)
acbd5a NA coding upstream 89679 21321300 ~ 21329803 (-)
pdss1 pdss1 coding upstream 155019 21386640 ~ 21393616 (-)
LOC120552736 apbb1ip coding upstream 181511 21413132 ~ 21442576 (-)
G221536 LOC105904583 non-coding downstream 2196 21188300 ~ 21188696 (-)
G221498 NA non-coding downstream 126891 21063513 ~ 21064001 (-)
G221473 NA non-coding downstream 227669 20962838 ~ 20963223 (-)
G221472 NA non-coding downstream 230062 20960628 ~ 20960830 (-)
G221471 NA non-coding downstream 278141 20912486 ~ 20912751 (-)
G221544 NA non-coding upstream 27228 21258849 ~ 21264057 (-)
G221550 NA non-coding upstream 37279 21268900 ~ 21269103 (-)
G221551 NA non-coding upstream 37821 21269442 ~ 21270409 (-)
G221567 NA non-coding upstream 69863 21301484 ~ 21302047 (-)
G221582 NA non-coding upstream 88269 21319890 ~ 21320410 (-)
LOC120552536 fbxl7 other downstream 328204 20835178 ~ 20862688 (-)
G221048 ankh other downstream 1863998 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 2241397 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 2379948 18772977 ~ 18810944 (-)
G220833 NA other downstream 2492922 18610236 ~ 18697970 (-)
tfr1b NA other upstream 758396 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 882761 22114382 ~ 22120611 (-)
smpx smpx other upstream 971146 22202767 ~ 22218381 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 2169922 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 3564968 24796589 ~ 24854888 (-)

Expression


Co-expression Network