G221616


Basic Information

Item Value
gene id G221616
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 21415951 ~ 21418007 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU299875
attgaaaaagtcatagtatagtatgtggaaaaaaaagtcaaagtatgtggggaaaaaaggtcatagtatagtatgtggggaaaaaagtcatagtatagtatgtggggaaaaaagtcatagtatagtatgtggggaaaaaggtcatagtatagtatgtggggaaaaaaggtcatagtatagtatgtggggaaaaaggtcatagtatagtatgtggggaaaaagtcatagtatagtatgtggggggaaaaaaggtcaaagtatagtatgtggggaaaaaaagtcatagtatagtatgtggggaaaaaggtcatagtatagtatgtggggaaaaaggtcatagtatagtatgtggggaaaaaggtcatagtatagtatgtggggaaaaaagtcatagtatagtatgtggggaaaaaggtcatagtatagtatgtgggg

Function

GO:

id name namespace
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component

KEGG:

id description
ko04666 Fc gamma R-mediated phagocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU299875 True 435 lncRNA 0.35 2 21415951 21418007

Neighbor

gene id symbol gene type direction distance location
pdss1 pdss1 coding downstream 22335 21386640 ~ 21393616 (-)
acbd5a NA coding downstream 86148 21321300 ~ 21329803 (-)
LOC120552199 yme1l1 coding downstream 103038 21303789 ~ 21312913 (-)
pks1 NA coding downstream 115457 21292784 ~ 21300494 (-)
zgc:111976 NA coding downstream 542999 20864843 ~ 20872952 (-)
gad2 gad2 coding upstream 46092 21464099 ~ 21484174 (-)
myo3a myo3a coding upstream 67215 21485222 ~ 21545450 (-)
LOC120551882 LOC104933965,LOC103370911,LOC101468576,LOC102294681 coding upstream 146862 21564869 ~ 21574510 (-)
anxa13 LOC107081825,LOC103456771,LOC105935762,LOC106515547,LOC103140553,LOC103370912 coding upstream 157599 21575606 ~ 21587153 (-)
LOC120552336 NA coding upstream 172937 21590944 ~ 21598756 (-)
G221604 abi1 non-coding downstream 43260 21345698 ~ 21372691 (-)
G221582 NA non-coding downstream 95541 21319890 ~ 21320410 (-)
G221567 NA non-coding downstream 113904 21301484 ~ 21302047 (-)
G221551 NA non-coding downstream 145542 21269442 ~ 21270409 (-)
G221550 NA non-coding downstream 146848 21268900 ~ 21269103 (-)
G221695 NA non-coding upstream 313280 21731287 ~ 21731487 (-)
G221708 arhgap21 non-coding upstream 396489 21814496 ~ 21815723 (-)
G221712 LOC104936438,LOC103366385 non-coding upstream 414149 21832156 ~ 21832884 (-)
G221768 NA non-coding upstream 526363 21944370 ~ 21944690 (-)
G221793 NA non-coding upstream 673534 22091541 ~ 22091753 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 194284 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 553263 20835178 ~ 20862688 (-)
G221048 ankh other downstream 2089057 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 2466456 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 2605007 18772977 ~ 18810944 (-)
tfr1b NA other upstream 572010 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 696375 22114382 ~ 22120611 (-)
smpx smpx other upstream 784760 22202767 ~ 22218381 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 1983536 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 3378582 24796589 ~ 24854888 (-)

Expression


Co-expression Network