G221837


Basic Information

Item Value
gene id G221837
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 22243807 ~ 22299575 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU300154
gagaaaatgaaagctcagatgggctgatctggaatcttctccttatgaggtcataaggagcaaggttacctcccctttctctgctttgcccggccagagaatttggcccgcccatgagagagaaagagacatcatggctttcaaacgagcaaaatggcagttggtcaaggccacacccctaccctccaccttgcccccccctctctcctcctcaatagctacagacacagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttcgggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaatgactataaaaaagcatccaaagagcaccatgtcatgggacctttaaacttcaCACAGATATTAACAATCAGAAAGACTGTGCAGTCTTTGTAAACAGTCACATAGGACAGTGCTTTACGGCAAGTGCATCATTTATTTGTACATGTGCTTTTTTTAAGTATGTGGCAACACGGTGGAAAAAGGTGTTATTGTTTTCCCTGGTGGTCCAGTAAAGCCTTAAAGGCAGATTAATGCTCAACAGTCTTTTGAAATTGGACAGCACTGCTGGGTAATGCAGTCTGTTCCCTATATGTTCACAGTTTAAATGGTCCACACCGTGTCAAACACAACCTGAGAGAACAGCTCTCGGTCCACGTGGGGGATTTATTTGTTTAGTTCTTTGTCTTGCCAGGGGAGCTCACCGCTGTGGCTACCGTGCCGTGACCATCCACAGGCCCAGTGCCACGTTGGCTGCCAGCAGGGCGCTGCCCGCGAGCAGCAGGAAGAAACCGATCAGCTCACGCTTTTGACGGTCCGTTACCACGGTTACCAGCGTTGCCTCCAGCAGTGCGTTCAGCATCCACTGACCGTCGAGCGCGAAGCACGGCACGGAGTTCACTACTGCTAGCGCACCAGAGAGAGACACCACATATCTGAGGGACAGGAGGGTTAAGGAGGACAATACTACAGTATTAATTAAGTTTATTCTTAATCTTAAatacacacagtctctcacacacacacacactttaaaactTCTACTCCatgctggtttaaaaaaataaataataaattgtccaAGTAGTGAGATTGTTTCCCACTGATGTTTCCCTGGTG

Function

GO:

id name namespace
GO:0016070 RNA metabolic process biological_process

KEGG:

id description
ko03040 Spliceosome
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU300154 True 1207 lncRNA 0.47 2 22243807 22299575

Neighbor

gene id symbol gene type direction distance location
LOC120551932 klhl34 coding downstream 43761 22195236 ~ 22200046 (-)
tnk2a LOC103363574 coding downstream 252460 21953645 ~ 21991347 (-)
tmtopsb LOC100702425,LOC101487167,LOC102300731,LOC104945569,LOC102206266,LOC103366381 coding downstream 326152 21876164 ~ 21917655 (-)
LOC120552274 NA coding downstream 524302 21716547 ~ 21719505 (-)
LOC120552272 thnsl1 coding downstream 532191 21706905 ~ 21711616 (-)
LOC120552124 NA coding upstream 380116 22679691 ~ 22688402 (-)
ggh ggh,LOC100704938,LOC108234706,LOC101480685 coding upstream 391455 22691030 ~ 22696864 (-)
LOC120552530 LOC103365300 coding upstream 397452 22697027 ~ 22801749 (-)
LOC120552328 epc1,LOC102784371,LOC100694393 coding upstream 541452 22841027 ~ 22888231 (-)
LOC120552717 LOC104965202,LOC103365305 coding upstream 612987 22912562 ~ 22921256 (-)
G221793 NA non-coding downstream 152054 22091541 ~ 22091753 (-)
G221768 NA non-coding downstream 299117 21944370 ~ 21944690 (-)
G221712 LOC104936438,LOC103366385 non-coding downstream 410923 21832156 ~ 21832884 (-)
G221708 arhgap21 non-coding downstream 428084 21814496 ~ 21815723 (-)
G221695 NA non-coding downstream 512320 21731287 ~ 21731487 (-)
G221843 ptchd1 non-coding upstream 843 22300418 ~ 22301215 (-)
G221844 ptchd1 non-coding upstream 7913 22307488 ~ 22308234 (-)
LOC120552529 NA non-coding upstream 25698 22325273 ~ 22335484 (-)
G221857 NA non-coding upstream 37500 22337075 ~ 22339870 (-)
G221926 NA non-coding upstream 659791 22959366 ~ 22960660 (-)
smpx smpx other downstream 25426 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 123196 22114382 ~ 22120611 (-)
tfr1b NA other downstream 232721 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 1022140 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 1381119 20835178 ~ 20862688 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 1101968 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 2497014 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 2663842 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 2736309 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 3256898 25556473 ~ 25562540 (-)

Expression


Co-expression Network