G221926


Basic Information

Item Value
gene id G221926
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 22959366 ~ 22960660 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU300267
gatatgagttgcctagtgttcagcgttcatgtgatcgttttggatccttcaagaggggtgtcaagacttatctgttggtcttacacttaaataattcattcattcttagagttatgatttgtatatttatggtatttttattagtttttattattgatattgtattgtcattattgatattattactattttgcttaatattggcttagcaactttaaaaactgtttactgttaatttttaactatttttaactattgtaagattcatattttgtcactttggacataagtgtctgctaaataatataaccataactataacccttcccaaaagctacaataaagctgagagtagtacagtatatgccctggaaaagagcaccaatacaagagaagctaattaagctattcaaggaacactgatgcttgtatcaacactgattttatagatccacagacttttcagctagccaacaggctaaccgctagcattttcaatgtaagcttacacagataggttacctgacagccactaactttaatgttacagccaaactgcttgttatcgttatgacgTGGCACGCGTGCGcacgcacgaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcctccctcccttcatgaaagtccctgttaatttgcctactccttaccacatcgtcatctactctctcttccatcttttcctcactcgctcccatggccctgtcatggccactcggcttcttccctgtcatgatttgtttctgcttctctgtatagccagccagctctcctcctcctccttcctctacttcaggtaatgctgatgttgaagaagctactacagccccaaacatgtccgaaatatttcaggaatccgcctgtagattcttaatctttttctcctgtaatttctctgccctcccttgcacttggtggtcgtttgtccattttaacgtgcatgctaaacttccagcataactacagctcgtgtctcagggccgggaggcgtggccatagtgggattcgtaaatttgcggcccggaatGGGGAAGGGggatcctggatttgattgggtcaggccagtgccaataaagaaaattaaccaatgggctgcagtgagttctttatgggccggcccggccaaaaaataaaaaaggcatatttatatcggcggttcggcccaaaagtccgtcggcccaccgggaaaatgcccggtatgccagatggccagtccagccctg

Function

GO:

id name namespace
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU300267 True 1295 lncRNA 0.43 1 22959366 22960660

Neighbor

gene id symbol gene type direction distance location
LOC120552717 LOC104965202,LOC103365305 coding downstream 38110 22912562 ~ 22921256 (-)
LOC120552328 epc1,LOC102784371,LOC100694393 coding downstream 71135 22841027 ~ 22888231 (-)
LOC120552530 LOC103365300 coding downstream 157617 22697027 ~ 22801749 (-)
ggh ggh,LOC100704938,LOC108234706,LOC101480685 coding downstream 262502 22691030 ~ 22696864 (-)
LOC120552124 NA coding downstream 270964 22679691 ~ 22688402 (-)
LOC120552718 NA coding upstream 108060 23068720 ~ 23070897 (-)
LOC120552656 cdh18,LOC102310872 coding upstream 167984 23128644 ~ 23308035 (-)
cdh10a LOC102783614,LOC100705471,LOC101477094,LOC102310056,LOC102199257 coding upstream 673023 23633683 ~ 23666857 (-)
drosha drosha coding upstream 1232718 24193378 ~ 24297851 (-)
mc4r LOC104930272,LOC103365861,LOC104961440 coding upstream 1396949 24357609 ~ 24361216 (-)
G221857 NA non-coding downstream 619496 22337075 ~ 22339870 (-)
LOC120552529 NA non-coding downstream 623882 22325273 ~ 22335484 (-)
G221844 ptchd1 non-coding downstream 651132 22307488 ~ 22308234 (-)
G221843 ptchd1 non-coding downstream 658151 22300418 ~ 22301215 (-)
G221837 NA non-coding downstream 659791 22243807 ~ 22299575 (-)
G221928 NA non-coding upstream 21304 22981964 ~ 22982351 (-)
G221933 NA non-coding upstream 79189 23039849 ~ 23040134 (-)
LOC120552653 NA non-coding upstream 110294 23070954 ~ 23071831 (-)
G221950 NA non-coding upstream 159118 23119778 ~ 23120288 (-)
G221960 NA non-coding upstream 295829 23256489 ~ 23256834 (-)
smpx smpx other downstream 740985 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 838755 22114382 ~ 22120611 (-)
tfr1b NA other downstream 948280 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 1737699 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 2096678 20835178 ~ 20862688 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 440883 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 1835929 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 2002757 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 2075224 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 2595813 25556473 ~ 25562540 (-)

Expression


Co-expression Network