G221960


Basic Information

Item Value
gene id G221960
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 23256489 ~ 23256834 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU300305
ccacacatttatgggaacttctgcaacagagttgggaagaactttctgaagaatatttgatttccattgtagaaagaatgccacgagtgtgttcagctgttatatctgccaaagggggctactttgatgagtcaaaaatttagactacattttggtttataaattgattccatgatttcttttttaacttaaatttgttctattctttcatttgagAGTACAAtgagacattgaactgcatgaatttcaattaaaacctggaaaaactggggtgttctaaaacttttgaccgtagtgtactttttttttttacccaccaCACGGAGGAGgggtgtggtggtggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300305 True 346 lncRNA 0.37 1 23256489 23256834

Neighbor

gene id symbol gene type direction distance location
LOC120552718 NA coding downstream 185592 23068720 ~ 23070897 (-)
LOC120552717 LOC104965202,LOC103365305 coding downstream 335233 22912562 ~ 22921256 (-)
LOC120552328 epc1,LOC102784371,LOC100694393 coding downstream 368258 22841027 ~ 22888231 (-)
LOC120552530 LOC103365300 coding downstream 454740 22697027 ~ 22801749 (-)
ggh ggh,LOC100704938,LOC108234706,LOC101480685 coding downstream 559625 22691030 ~ 22696864 (-)
cdh10a LOC102783614,LOC100705471,LOC101477094,LOC102310056,LOC102199257 coding upstream 376849 23633683 ~ 23666857 (-)
drosha drosha coding upstream 936544 24193378 ~ 24297851 (-)
mc4r LOC104930272,LOC103365861,LOC104961440 coding upstream 1100775 24357609 ~ 24361216 (-)
rnf152 rnf152 coding upstream 1403277 24660111 ~ 24723840 (-)
LOC120552289 NA coding upstream 1507827 24764661 ~ 24770211 (-)
G221950 NA non-coding downstream 136201 23119778 ~ 23120288 (-)
LOC120552653 NA non-coding downstream 184658 23070954 ~ 23071831 (-)
G221933 NA non-coding downstream 216355 23039849 ~ 23040134 (-)
G221928 NA non-coding downstream 274138 22981964 ~ 22982351 (-)
G221926 NA non-coding downstream 295829 22959366 ~ 22960660 (-)
G221962 NA non-coding upstream 57854 23314688 ~ 23314893 (-)
G221999 NA non-coding upstream 416026 23672860 ~ 23673189 (-)
G222001 NA non-coding upstream 434579 23691413 ~ 23691962 (-)
G222012 NA non-coding upstream 566519 23823353 ~ 23823678 (-)
G222037 LOC105920180,LOC107100491,LOC106522295,LOC107383085 non-coding upstream 895645 24152479 ~ 24152762 (-)
smpx smpx other downstream 1038108 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 1135878 22114382 ~ 22120611 (-)
tfr1b NA other downstream 1245403 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 2034822 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 2393801 20835178 ~ 20862688 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 144709 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 1539755 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 1706583 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 1779050 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 2299639 25556473 ~ 25562540 (-)

Expression


Co-expression Network