G221999


Basic Information

Item Value
gene id G221999
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 23672860 ~ 23673189 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU300346
ggcgtcctttccccgggcgcctcccggccTCCCGGCCGGCGTGTGGCACCTCATgaggccgcctcccggcgtcctttccccgggcgcctcccggccggcgtgtggcgcCTCATgaggccgcctcccggcgtcctttccccgggcGCCTCGGTCGAGAAAAACGTGTATAtttacacgaaaaaaacgagaaaaacgtttccgtgaacacgttc

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04724 Glutamatergic synapse
ko05014 Amyotrophic lateral sclerosis
ko05030 Cocaine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU300346 True 212 lncRNA 0.67 3 23672860 23673189

Neighbor

gene id symbol gene type direction distance location
cdh10a LOC102783614,LOC100705471,LOC101477094,LOC102310056,LOC102199257 coding downstream 6003 23633683 ~ 23666857 (-)
LOC120552656 cdh18,LOC102310872 coding downstream 364825 23128644 ~ 23308035 (-)
LOC120552718 NA coding downstream 601963 23068720 ~ 23070897 (-)
LOC120552717 LOC104965202,LOC103365305 coding downstream 751604 22912562 ~ 22921256 (-)
LOC120552328 epc1,LOC102784371,LOC100694393 coding downstream 784629 22841027 ~ 22888231 (-)
drosha drosha coding upstream 520189 24193378 ~ 24297851 (-)
mc4r LOC104930272,LOC103365861,LOC104961440 coding upstream 684420 24357609 ~ 24361216 (-)
rnf152 rnf152 coding upstream 986922 24660111 ~ 24723840 (-)
LOC120552289 NA coding upstream 1091472 24764661 ~ 24770211 (-)
LOC120552302 NA coding upstream 1098717 24771906 ~ 24777805 (-)
G221962 NA non-coding downstream 357967 23314688 ~ 23314893 (-)
G221960 NA non-coding downstream 416026 23256489 ~ 23256834 (-)
G221950 NA non-coding downstream 552572 23119778 ~ 23120288 (-)
LOC120552653 NA non-coding downstream 601029 23070954 ~ 23071831 (-)
G221933 NA non-coding downstream 632726 23039849 ~ 23040134 (-)
G222001 NA non-coding upstream 18224 23691413 ~ 23691962 (-)
G222012 NA non-coding upstream 150164 23823353 ~ 23823678 (-)
G222037 LOC105920180,LOC107100491,LOC106522295,LOC107383085 non-coding upstream 479290 24152479 ~ 24152762 (-)
G222038 LOC104961439,LOC107383085 non-coding upstream 495123 24168312 ~ 24168549 (-)
G222039 NA non-coding upstream 504551 24177740 ~ 24177987 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other downstream 153334 23401543 ~ 23519526 (-)
smpx smpx other downstream 1454479 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 1552249 22114382 ~ 22120611 (-)
tfr1b NA other downstream 1661774 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 2451193 21217680 ~ 21221667 (-)
avl9 avl9 other upstream 1123400 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 1290228 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 1362695 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 1883284 25556473 ~ 25562540 (-)
LOC120552722 NA other upstream 2049301 25722490 ~ 25738940 (-)

Expression


Co-expression Network