LOC120552232 (LOC103371349)


Basic Information

Item Value
gene id LOC120552232
gene name LOC103371349
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 25035884 ~ 25086902 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302014
ccccccaaaaaaagagaagaaaactgATTTACAGGCGACACTGCGTGTTAAAACTTCCCAGACTTCACTTCGGTGGCGTTTTCACTCCAGTGCACGTGTTTCCTGCTGGAGATGTCGGCCAGGTGAGCTGCTGTTCGCCAGGGCTGGATGAGATGTGACCATGGCCTTTACGCACCGGCTCGCTCTGCTCCTGCTCGGCTTCAGCTCCATCCTCACGGTTAATGGAAAGTTTCCTAGCTGCCAGTTCCATTGGGAGATGCAGAGAGCCAGGAGAGAGTGTCAGACGCAACTGCAGCAACCGACTCCTGCTAGCATAGGATGTCACGGCGAGTGGGACAATTTATCCTGTTGGCAGAGTGCAACGGTCGGCAGTGTGATAACCCGCCCCTGCCCCCTCTCCCTCCTGCACCTGTTTGGAAAAAATGGTAACCTCAGCAGGAACTGCACAGAGACCGGTTGGTCTGACGTCTACCCCGCCATCACCGTCGCCTGCTGGTCCAACAACACGGGTGAACCCAGCGAGTGAACCTGTGTTATCGGTCTGCTCTGTCGGTGTTTTTGGATCCGTGTGTTTTGAACCTGAGGCGTCCTGTGCGATGCCGCGGAGCTTATCTTCCGACCGTCCCAGTTATTGCTTCCGGTCCCGGCTGCATTCCAGGACCCTTTGGTTTATACTGAGCTTTAAACAAGCAGGTAACATCCAGGTTTAAGAGAATATCCGGAACCACTATTGTGTCCACGCTGAATAAAGCCACACACTCCCCCCTTGTTCTCTCATTCTTTACCGTGCAGTCTGGTTGAAAGTCCATCATTCTTCAGAGTCTCA
>XM_039790082.1
TTGTGAGGGAACGGGCAGTGACCCGGACCGCCGCTTCGCTACAAACGGGAAGCGGCTCGTGTCAGTTTGGACTGTTTCAGGTGTGAATTCAGCGGTTCCTTTCTGGAATGTTTGTTCGCAaacatttggcttttttttttaatgacgcACAGAGAGGTCTGATTCGTGCGTAAAGCTGCAAAACCAACgtgcccccccccaaaaaaagagaagaaaactgATTTACAGGCGACACTGCGTGTTAAAACTTCCCAGACTTCACTTCGGTGGCGTTTTCACTCCAGTGCACGTGTTTCCTGCTGGAGATGTCGGCCAGGTGAGCTGCTGTTCGCCAGGGCTGGATGAGATGTGACCATGGCCTTTACGCACCGGCTCGCTCTGCTCCTGCTCGGCTTCAGCTCCATCCTCACGGTTAATGGAAAGTTTCCTAGCTGCCAGTTCCATTGGGAGATGCAGAGAGCCAGGAGAGAGTGTCAGACGCAACTGCAGCAACCGACTCCTGCTAGCATAGGATGTCACGGCGAGTGGGACAATTTATCCTGTTGGCAGAGTGCAACGGTCGGCAGTGTGATAACCCGCCCCTGCCCCCTCTCCCTCCTGCACCTGTTTGGAAAAAATGGTAACCTCAGCAGGAACTGCACAGAGACCGGTTGGTCTGACGTCTACCCCGCCATCACCGTCGCCTGCTGGTCCAACAACACGGGTGAACCCAGCGAGcTGGTCTTCTACAAGATAGTGAGGATCCTGTCCACTCTGGGCCACAGCCTGTCCCTCATCACTCTGCTCACCAGCACCATCATCATCTGTTTGTTCAGgaagCTCCACTGCACGAGGAACTACATCCatgtgaacttgtttttgtcgttcatgCTTCGAGCTGTGTCCGTGCTGATCAAAGACGCGCTGCTCTTCTCAGGCGACCAAAACACCGACTGCAGCACGCAACCCTCGCtggtgGGCTGCAAGGCCAGCCTGGTGTTCTTCAACTACTTCGTCATGGCCAACTTCTTCTGGCTGCTGGTGGAGGGTCTGTACCTGCACACGCTGCTGCTCGTCATCCACAGCTACTCCACCCGCCTCTCCATGTACATGCTCATCGGCTGGGgAATCCCTTTAGTTTTCATGATAGCGTGGATCATATGCAGGGTACAACTGGAGGACACGAGGTGTTGGGAGTTGAATGACAACCCTGTCCCCAACAGACTGATGAACTGGCCCATCATGGCTTCTGTCATTATCAACTTCCTCCTGTTCATCAGCATCATCCGCATCCTGGTGCAGAAGCTGCGCTGCACTGACGTCGGAGGAAATGAGCAGTCGCAATACAAACGTCTGGCGAAGTCCACCCTCCTGCTGATCCCTCTGTTTGGGGTGAACTACGTGGTGTTAGTCTACCTGATGGAGCCCACTGACAGAGACATGCAGCGTGTAAAGATCGTCTTTGAACTCGGCCTCGGCTCCTTCCAGggtCTAATTGTGGCTGTCCTCTATTGTTTCCTCAACAGCGAGGTCCAGAGCGAGCTGAGGAGGACGTGGAGGAGTTTATCACTCAAGCGTTACGTGGGGCGGGACTACAGGCTGCACGCCATGTCTGTCAGCCGCAACGGCAACGAAAGCTCTCAGTTCCCCAGGAACTCCCGAGCTCAGTCCATCCTGCAGACTGAGACCACCGTGATCTGACCGGGGGGGGGGAGACGTTCAGAACTGATGCCCACATTTTAGGCAGATACAGTCAAGGGTCAAAGTCTCACTGAAGGACACTTTGTTTGCTCACATATTGTTTGCTCCTGCTGCGATTGAACCTGTGACCTGCAGACGTTTCTGAGGACTTCTTGTTGGACcgtgacacccccccccctcccaacaAAAAGGTAC

Function

NR:

description
PREDICTED: vasoactive intestinal polypeptide receptor 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302014 False 826 TUCP 0.54 5 25056593 25086708
XM_039790082.1 True 1875 mRNA 0.54 13 25035884 25086902

Neighbor

gene id symbol gene type direction distance location
emc9 emc9 coding downstream 112712 24918372 ~ 24923172 (-)
psme2 psme2 coding downstream 166050 24862510 ~ 24869834 (-)
LOC120552302 NA coding downstream 258079 24771906 ~ 24777805 (-)
LOC120552289 NA coding downstream 265673 24764661 ~ 24770211 (-)
rnf152 rnf152 coding downstream 312044 24660111 ~ 24723840 (-)
LOC120552233 LOC100707500,LOC102204569,LOC102296665,LOC101471184 coding upstream 5675 25092577 ~ 25179568 (-)
LOC120552454 NA coding upstream 95310 25182212 ~ 25197533 (-)
LOC120551896 LOC101467476,LOC100708037,LOC105920600,LOC101173583 coding upstream 112160 25199062 ~ 25229544 (-)
LOC120552403 NA coding upstream 327982 25414884 ~ 25427197 (-)
chrnd chrnd coding upstream 342336 25429238 ~ 25437142 (-)
G223184 NA non-coding downstream 1520 25034076 ~ 25034364 (-)
G223155 NA non-coding downstream 11970 24996626 ~ 25023914 (-)
G223181 NA non-coding downstream 24066 25007489 ~ 25011818 (-)
LOC120552179 NA non-coding downstream 81387 24928324 ~ 24954497 (-)
LOC120552180 NA non-coding downstream 131184 24894572 ~ 24904700 (-)
G223193 NA non-coding upstream 111444 25198346 ~ 25199030 (-)
G223202 NA non-coding upstream 170764 25257666 ~ 25333390 (-)
LOC120552440 NA non-coding upstream 208557 25295459 ~ 25300407 (-)
LOC120552444 NA non-coding upstream 222357 25309259 ~ 25313802 (-)
G223206 NA non-coding upstream 229710 25316612 ~ 25385621 (-)
msl2b msl2,LOC102304425,LOC102778660 other downstream 67778 24963417 ~ 24968106 (-)
avl9 avl9 other downstream 180996 24796589 ~ 24854888 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other downstream 1516358 23401543 ~ 23519526 (-)
smpx smpx other downstream 2817503 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 2915273 22114382 ~ 22120611 (-)
LOC120552299 NA other upstream 469571 25556473 ~ 25562540 (-)
LOC120552722 NA other upstream 635588 25722490 ~ 25738940 (-)
mynn mynn other upstream 730527 25817429 ~ 25834224 (-)
G223328 NA other upstream 894558 25981460 ~ 26042864 (-)
G223331 LOC101483661,LOC101069443,LOC103355338,LOC108249550 other upstream 896692 25983594 ~ 25997932 (-)

Expression


Co-expression Network