G223301


Basic Information

Item Value
gene id G223301
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 25799721 ~ 25800693 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302220
agtcgaaccctcggccgctgcgtcaaggagtaaacctccatatatgggcgcgcgcatCTGAGTTCATCCCATACTTGATAAAACTGCCAACATATTGCTCAGTTTTATAATCAACTTCCAGTGGAGCTGTATCGCGATTATATAATCATATCTGTCGTTCAAATGAAtgttgtgcagtagaaaatgaaagatggatagctcagttggtagagcgggcgcccatatatagaggatTACCCCTTGATGcagtggccgcgggttcgactccgacctgcagcccttttctgtatgtcatctctctctctctctctctctctctctctctctctctctctctctctctctctctctctccccctccctccctctctctctctctctctctctctcctttcatgtcttcagctgtcctatataaataaaaggcctaaaatgcccaaaaaagtaTCTACAAACAAATAGAAAATTAATGAGATGAGCTCATAGACACTCAATATTAAActggtcataaaaaaaaataaaaagtgttcCTCCttgcccacagatacagtttgCCCAGTTGTCCAATGAAATTGTGGAACACAGTTCATTTCATTGAACGTcaacttgacttttttttaataataattatcaaTGCCATATCCTACATATAGAAATCGGAAACTTGTTTCAATATTTAATAGTTAATTTCAGCCCCATCTGTCAGCCCTACGTTCTGTTTTTCTTCTAACCAGATGTGGAGGGTGTCAGTTCATAGTAAAACTATGTTTTACAAGATAAGCTGGGCAACATGGATCTGAATTAGGCCATAATTAATCTACAGGTAAAGACTGTTCTTGACAACAAAAGATATCACATCAAGTGACATGATAATGCGATTATAACTCTGTGAAATGCAATCATTACTTTAATcaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302220 True 917 lncRNA 0.40 2 25799721 25800693

Neighbor

gene id symbol gene type direction distance location
klhl15 klhl15 coding downstream 34409 25742577 ~ 25765312 (-)
acot9.1 acot9 coding downstream 93078 25684062 ~ 25706643 (-)
pdha1b pdha1,LOC104960622 coding downstream 116451 25669233 ~ 25683270 (-)
rps6ka3b rps6ka3,LOC107081812 coding downstream 138990 25591480 ~ 25660731 (-)
eif1axb eif1ax,LOC101173816,LOC102222479,LOC107081821 coding downstream 225756 25563886 ~ 25573965 (-)
cldn11b cldn11,LOC104933881,LOC104940783 coding upstream 300195 26100888 ~ 26110027 (-)
si:ch211-230g15.5 LOC103369797,LOC102301809,LOC102203330,LOC100701790 coding upstream 309714 26110407 ~ 26148023 (-)
rmc1 clg3h18orf8,LOC104932202,LOC103368274,LOC101473408,LOC102288614,LOC103129440 coding upstream 522800 26323493 ~ 26345733 (-)
riok3 riok3 coding upstream 551938 26352631 ~ 26375762 (-)
trnai-aau_30 NA coding upstream 646993 26447686 ~ 26447759 (-)
G223277 NA non-coding downstream 29578 25700797 ~ 25770143 (-)
G223288 NA non-coding downstream 50008 25748479 ~ 25749713 (-)
G223283 NA non-coding downstream 57600 25739634 ~ 25742121 (-)
G223239 sat1,LOC102777910 non-coding downstream 78540 25658589 ~ 25721181 (-)
G223270 NA non-coding downstream 162483 25636454 ~ 25637238 (-)
G223303 NA non-coding upstream 8071 25808764 ~ 25896644 (-)
G223305 NA non-coding upstream 23669 25824362 ~ 25826846 (-)
G223314 NA non-coding upstream 114564 25915257 ~ 25915749 (-)
G223318 NA non-coding upstream 127946 25928639 ~ 25930103 (-)
G223320 NA non-coding upstream 132304 25932997 ~ 25935547 (-)
LOC120552722 NA other downstream 60781 25722490 ~ 25738940 (-)
LOC120552299 NA other downstream 237181 25556473 ~ 25562540 (-)
LOC120552232 LOC103371349 other downstream 712819 25035884 ~ 25086902 (-)
msl2b msl2,LOC102304425,LOC102778660 other downstream 831615 24963417 ~ 24968106 (-)
avl9 avl9 other downstream 944833 24796589 ~ 24854888 (-)
mynn mynn other upstream 16736 25817429 ~ 25834224 (-)
G223328 NA other upstream 180767 25981460 ~ 26042864 (-)
G223331 LOC101483661,LOC101069443,LOC103355338,LOC108249550 other upstream 182901 25983594 ~ 25997932 (-)
G223351 NA other upstream 253826 26054519 ~ 26059062 (-)
G223350 NA other upstream 259304 26059997 ~ 26130122 (-)

Expression


Co-expression Network