G223319


Basic Information

Item Value
gene id G223319
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 25937793 ~ 25939788 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302245
TCCGTTTTGATGACTTATTattacattgtttatttatgCCATCATTTCACAAAAAGCGACGCATGACGTGATGATGCGGATCATTTAAGGGGTCGCAATGGGGAAAACAACAGTCTGTGCAAATAGTGCATTTGTATAGAGACACAGTGATTCAAGTCAGACAGAGAAAGGACAGAGAAAAGACAGGAAAACGTCAGTGTTTCTCAACCTCGACACTTCAGGTTCAAGCTCCTTGGTGACCGCTGACCGTTTACACCTGCTATCAATCCATGTGCATTGCATGTCTGCGTTCCTGATtactaaaaaaagaattaaaacaaaaactgtatACACATCTGTGGTTTAAATCaggcctgttctcatgaagcattcgtacatatatagctacgaaaagtacaGCACTGGAATTCGTCTGCATTCAACGTATTTATTgctgtcagcagcacattgactgcagggagcagagttcacttcgcgaaaaaaaaaaagactttcaaaagactttcacccaggaaacgcgtttgttcctcgggagtgttttaatccaaaccacgatcttgtcctccttttcggccggatgtccgtccccttcctctgtctctgtgttggcgttctaacctccggtggatttgtgaggactatggttaactgctcctcagatctctgcagggtaaatccagacagctagctagactatctgtccaatcggagttttctgtcgcacgactaaaacaacttttgaacgtacacgttgcaccaaaacaagttccttcccgaggctattttgcagcggcatcgtggctctgtccggcgcttattgcgcccatgatgattgtgattggtttaaaaaaaaaatgccaatcaaccagagcacgtttttctctcatcccggAAGGCTTTGTGGAGGCTTTGTGTGCAAAATGCGAGACTACTCAACTACCAACCGCTGCTGATACgatggagctctgtagccggcttcacgtgaccagccggctAATGTCGTAGAATACCATACGTATtgctgtgcatacattttcgtactaTATTGTACATAccagttcatgagaatgcgttatTTAaattcagttatcctggatgcaCAGAAAACATTTCCATCCAAATCAACTTCTTTGCCGATGATCTCATCCTATCTCCGTAAGGGGAATTCAGTTGTTCGATCTCTTTATAATCTGTTTTAGATGTAAACAAGCTGGCATTGCATGAGCACTTTGTTCGCCTTTTCAACAACAACTATACTAAATTTGGGGTGGTGGTAGCTGCAAATATTTCAGAATTTTCTAAATCTGATTTCATCACaaagattaaaaacatgaaCCGGAGCAGGAGGTAGAAACACAGGGAGGTAGAGAGGGAGATAAAAAGAAGAGCACATTTAAGGTCCCATTTTCCATCAATATTAACAGTAGAGAAAGTTCAGTTGCATCTGGACGACACACAGCTTCTGGACAGGCACACTGTTTAGCATCAATAATGTCCATGGCTTTAAAGGCAATCATTCAGTTTGCAGagttcatgctttttttttttttatccgttTAATGGCAAACGAGCTGCTGTCATGCTGTCAGCTACGAGCATCGTGGGTCGAATTTATAGCACAGAACAACTTCATGCAGATCACCCACAGACCAACGAGGAAGACACTAAGAAACATCGATGCTGCGTTTCAAGCGGCTTCAAAATTGGAAATCTAGAGACGACCGTTTTCCAAAATACTGATGGATCTgagtttaaccctcctgttgtcctcgggtcaaatttgacccattttcaaaaagtttctatatccgaaacgtgggtttctttcaaccaaatagtCAAAAAAAGTAACATGGATGGTTCTCTACAACGCTCTTTACATGTAAAATAaacgatcagttcactacttgcATTGAATttaggtgttttattcaatttgacagcatttggaaaaaaaattataaaagacaaaaagagacaaaaatgttgtgaaaaa

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU302245 True 1996 lncRNA 0.41 1 25937793 25939788

Neighbor

gene id symbol gene type direction distance location
lrrc34 NA coding downstream 125010 25797285 ~ 25812783 (-)
klhl15 klhl15 coding downstream 172481 25742577 ~ 25765312 (-)
acot9.1 acot9 coding downstream 231150 25684062 ~ 25706643 (-)
pdha1b pdha1,LOC104960622 coding downstream 254523 25669233 ~ 25683270 (-)
rps6ka3b rps6ka3,LOC107081812 coding downstream 277062 25591480 ~ 25660731 (-)
cldn11b cldn11,LOC104933881,LOC104940783 coding upstream 161100 26100888 ~ 26110027 (-)
si:ch211-230g15.5 LOC103369797,LOC102301809,LOC102203330,LOC100701790 coding upstream 170619 26110407 ~ 26148023 (-)
rmc1 clg3h18orf8,LOC104932202,LOC103368274,LOC101473408,LOC102288614,LOC103129440 coding upstream 383705 26323493 ~ 26345733 (-)
riok3 riok3 coding upstream 412843 26352631 ~ 26375762 (-)
trnai-aau_30 NA coding upstream 507898 26447686 ~ 26447759 (-)
G223320 NA non-coding downstream 2246 25932997 ~ 25935547 (-)
G223318 NA non-coding downstream 7690 25928639 ~ 25930103 (-)
G223314 NA non-coding downstream 22044 25915257 ~ 25915749 (-)
G223303 NA non-coding downstream 41149 25808764 ~ 25896644 (-)
G223305 NA non-coding downstream 110947 25824362 ~ 25826846 (-)
G223322 NA non-coding upstream 16499 25956287 ~ 25956599 (-)
G223334 NA non-coding upstream 52081 25991869 ~ 25992187 (-)
G223347 NA non-coding upstream 83172 26022960 ~ 26023495 (-)
G223348 NA non-coding upstream 86317 26026105 ~ 26086680 (-)
G223354 NA non-coding upstream 95627 26035415 ~ 26035801 (-)
mynn mynn other downstream 103569 25817429 ~ 25834224 (-)
LOC120552722 NA other downstream 198853 25722490 ~ 25738940 (-)
LOC120552299 NA other downstream 375253 25556473 ~ 25562540 (-)
LOC120552232 LOC103371349 other downstream 850891 25035884 ~ 25086902 (-)
msl2b msl2,LOC102304425,LOC102778660 other downstream 969687 24963417 ~ 24968106 (-)
G223328 NA other upstream 41672 25981460 ~ 26042864 (-)
G223331 LOC101483661,LOC101069443,LOC103355338,LOC108249550 other upstream 43806 25983594 ~ 25997932 (-)
G223351 NA other upstream 114731 26054519 ~ 26059062 (-)
G223350 NA other upstream 120209 26059997 ~ 26130122 (-)
G223395 cul1,LOC107713664 other upstream 277097 26216885 ~ 26218324 (-)

Expression


Co-expression Network