G223331 (LOC101483661,LOC101069443,LOC103355338,LOC108249550)


Basic Information

Item Value
gene id G223331
gene name LOC101483661,LOC101069443,LOC103355338,LOC108249550
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 25983594 ~ 25997932 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302260
caaacttttggcctgtactgtatcttagcaggaagttgaaaaatgttgagtttacttcacacaagagcagccatttccccctgttgccatgggaacctAATGAagtgactttttttctctttttcatcaaaccgcagtttttccaagttcccgcaatttcatcgcatgatattgcataaatatcccgcatattcaattcaatttttttaagaaaacgtgccgcataatcaaggactTTTGCCCCccaaacaatcacaaaaaaaactcgcACACGCATTGTTCTAGAAGGACTGTAAAGAGGGAATCGTTGCGCCGGCCGGGGGTTAGATGGTAAGCCGGGCCTGCAGAGACGGCAGGACCAGAAAGGAGACGGAGAGAACGAGCAGAGAAGAAGAGCGTGTTCAGCCCTCCGACTGACTGACCCGGCGGCCGGGGCTCCGGCCCCTGGAGTCGGAGCTCCTCTCGGGGCTCCTGCTGGGGCTCTGCTGCTGGCGCGTCTCTGGGACGCAGGTGACCTGGATTTGAGGCAAGTGGTGGTGATCCCTAGTAGGGCTGATGTGAGCGGGATAGGAAGGGGGGCGCGGGCGCGGAGGTTTGTAACCGGGCAGTAAGAGCAGGTTGCTCAGGATGTCGCTGTTGTTGCTCGTCTCCCTGAAGGAGTGGTATTTCTTGGGAGGGACGCGAGGAGAGTTGCTCTGAGCTCGACGCATCACcTCTTTGGCCCAGGCCGGCTTGTCGTTGGTGCTGGGCGCCTGGTCTTTGTAGTGGTACAGCTGCTTCTTGTCCTGCGGCGCCCCCGGCGGGCGCGGcggctcctgctgctgctgcagcgaCACCAGGTACGCTCGCTCCTGCTGCAGCTGCCTCTGCAGCCGCTCGGCCTGCCGCTGCTCCTCGATCTGCTTCCTCTTGTACTCCTGTTCTCTCTCTGCgtgcctcctctcctcctctcgccGGAGCTGCTCCATCTCTTCGTACCTGCGCCTCTGTTCTCGCTCCTGCTGCTTCCTCATCTCTCGCTCCCGGCGCTGTTGCTCCTCCAGCCGTCGCCTCTGCTCTTTCTGCTCCTCGATGCGTTTCTGCCTCTCCGCCAGCAGTTGGCGCTTGTGTTCCTCgttctgctgctgctccagCTGCTGGCGCCGGATCAGCTCCGACCGCTCCTTATTGGCCAGCTGGAGGCGCAGGAAGTCCCGCCTCAGGGTGGACTCCCCGGGGATGTTGATGATGGAACTAGAGGAGGAGCAGTGAGAGTGCAG
>TU302261
CTAAGGGTTCCTGCTGCAAAGGTTCACCTGAGTGTCTGTGCACACGTCTACATGTTGGCAGAGCTGCctgtgagcctgtgtgtgtatgtgtgtgcctttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgccagcgtgtgcgcctgtgtgtgtgtgtgcgtgtctgtgtgcctgtgtatgcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacggaggTTCAGCACTGCATCCTGAGAGATGAAAAAGTTATTATATAACACATGTATAAACCTCTAACAGCATCCAGTCTCATTTCTTATCCAGTCTTATATATATCCATATATccatgtctgtgtgcgtgtgttaccTCTTTGGCCCAGGCCGGCTTGTCGTTGGTGCTGGGCGCCTGGTCTTTGTAGTGGTACAGCTGCTTCTTGTCCTGCGGCGCCCCCGGCGGGCGCGGcggctcctgctgctgctgcagcgaCACCAGGTACGCTCGCTCCTGCTGCAGCTGCCTCTGCAGCCGCTCGGCCTGCCGCTGCTCCTCGATCTGCTTCCTCTTGTACTCCTGTTCTCTCTCTGCgtgcctcctctcctcctctcgccGGAGCTGCTCCATCTCTTCGTACCTGCGCCTCTGTTCTCGCTCCTGCTGCTTCCTCATCTCTCGCTCCCGGCGCTGTTGCTCCTCCAGCCGTCGCCTCTGCTCTTTCTGCTCCTCGATGCGTTTCTGCCTCTCCGCCAGCAGTTGGCGCTTGTGTTCCTCgttctgctgctgctccagCTGCTGGCGCCGGATCAGCTCCGACCGCTCCTTATTGGCCAGCTGGAGGCGCAGGAAGTCCCGCCTCAGGGTGGACTCCCCGGGGATGTTGATGATGGAACTGGGCTCTCCCGACGTccctctcctcatcctcctcttcactCCCACTGTACTCGTACTCTGTCTcatctggaggacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttcag

Function

NR:

description
PREDICTED: traf2 and NCK-interacting protein kinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302260 True 1259 lncRNA 0.58 4 25985173 25997932
TU302261 False 1191 TUCP 0.56 4 25983594 25993497

Neighbor

gene id symbol gene type direction distance location
lrrc34 NA coding downstream 170811 25797285 ~ 25812783 (-)
klhl15 klhl15 coding downstream 218282 25742577 ~ 25765312 (-)
acot9.1 acot9 coding downstream 276951 25684062 ~ 25706643 (-)
pdha1b pdha1,LOC104960622 coding downstream 300324 25669233 ~ 25683270 (-)
rps6ka3b rps6ka3,LOC107081812 coding downstream 322863 25591480 ~ 25660731 (-)
cldn11b cldn11,LOC104933881,LOC104940783 coding upstream 102956 26100888 ~ 26110027 (-)
si:ch211-230g15.5 LOC103369797,LOC102301809,LOC102203330,LOC100701790 coding upstream 112475 26110407 ~ 26148023 (-)
rmc1 clg3h18orf8,LOC104932202,LOC103368274,LOC101473408,LOC102288614,LOC103129440 coding upstream 325561 26323493 ~ 26345733 (-)
riok3 riok3 coding upstream 354699 26352631 ~ 26375762 (-)
trnai-aau_30 NA coding upstream 449754 26447686 ~ 26447759 (-)
G223322 NA non-coding downstream 26995 25956287 ~ 25956599 (-)
G223319 NA non-coding downstream 43806 25937793 ~ 25939788 (-)
G223320 NA non-coding downstream 48047 25932997 ~ 25935547 (-)
G223318 NA non-coding downstream 53491 25928639 ~ 25930103 (-)
G223314 NA non-coding downstream 67845 25915257 ~ 25915749 (-)
G223347 NA non-coding upstream 25028 26022960 ~ 26023495 (-)
G223348 NA non-coding upstream 28173 26026105 ~ 26086680 (-)
G223354 NA non-coding upstream 37483 26035415 ~ 26035801 (-)
G223363 rpl22l1 non-coding upstream 73157 26071089 ~ 26073942 (-)
G223371 NA non-coding upstream 108780 26106712 ~ 26106987 (-)
mynn mynn other downstream 149370 25817429 ~ 25834224 (-)
LOC120552722 NA other downstream 244654 25722490 ~ 25738940 (-)
LOC120552299 NA other downstream 421054 25556473 ~ 25562540 (-)
LOC120552232 LOC103371349 other downstream 896692 25035884 ~ 25086902 (-)
msl2b msl2,LOC102304425,LOC102778660 other downstream 1015488 24963417 ~ 24968106 (-)
G223351 NA other upstream 56587 26054519 ~ 26059062 (-)
G223350 NA other upstream 62065 26059997 ~ 26130122 (-)
G223395 cul1,LOC107713664 other upstream 218953 26216885 ~ 26218324 (-)
G223433 NA other upstream 406069 26404001 ~ 26409357 (-)
G223435 NA other upstream 473772 26471704 ~ 26475911 (-)

Expression


Co-expression Network