G223436


Basic Information

Item Value
gene id G223436
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26468422 ~ 26470795 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302400
aggttttgatttttttcagtatttatttatttatttgtttgtttttattagtttttaatataaatataaatcttCTTTTTAACATCTTGAGTTTCGTTGTTTTTGGTGCAAacgtgaagaaaaaaaatcagaacCGTACGGAGACAGTTTCATCTTTTAGTGTTTCAACTCTCGTTTCACAATTCATCTCCAAAATATGGACGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATTTCGAGAGCAGAGAGATTTCGAGATCAGAGAGATGTAGAGATCAGAGAGATTTCGAGAGCAGAGAGATTTCGAGATCAGAGAGATGTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATGTAGAGATCAGAGAGATGTAGAGATCAGAGAGATGGTTTTGGGATTCGAGACCCAGAAACTATTCGTGAGGtttgggaaaagaaaagaagaaatctGGCTCTGCGGATAACGTCCGTAACTTTCCCAAAAACATTTCCACCCGTTCAGAAGGAGTCCATGACTGTTGGTACCTTGAACCTGGTCCAAACAGGGTTAACCCAGgctaaagaagaagagaagaggggagaaagagaggaagaacgAGAGAAGAgtagaggaaggagagaagatgagagaaagagaggaaggagagaagaggagagaaagagaggaagaaggagaaaagagaaagagaggaaggagagaagagtagaggaaggagagaagatgagagaaagagaggaaggagagaagaggagagaaagagaggaagagggagagaagagaaagagaggaaggagagaagagtagaggaagaaggagagaagatgagagaaagagaggaaggagagaagaggagagaaagagaggaaggagagaagaggagataaaataagagaaagaggaaagagagaagaggagagaaagagaggaaggagagaagagataaagagaggaagagaggaaggagagaagagataaagagaggaaggagaggagagaaaaggagagaaagagaggaaggagaggagagaaaaggagagaaagagaggaagaaagagaggaaggagcgaagagagaaagagaggaagaaggagagaagagagaaagagaggaagaaagagaggaaggagagataatgagagacagagagaggaaggagaggagcgaaagagagaagaggagagaaaaaggaaggagagaagaaggaGCGTAAGACaggaagaaggagagaaagagagaagaggagagtacgacaggaagaaggagagaaagagagaagaggagagaaagacaggaagaaggagaaaaaaagagagaaccaATCATGACGTTCGGGAGAAGAAGAAAGCTGGCTCTGCAGATTACATCCATGACTGTTGGTACCTTGAACCCGGTCCAAACAGGGCTAACCCGGTCCAAACAAGGCTAACCCGGGTTAAATCCGGGCTAAAACAAGTACTCttatgtttgcttttttttgggcGAAAGGTTGTAACGTCAGTAGTAACTTTTTCATTTCTTCGGTCCGAGCGTTTGATCCTTCGACAGACAATCATTTAGTTCATCCTCACGCACAAAAcggcaaaaacaacaacaaaaaaaactccattaaTCCACCGAGGGAAGGAGCGCCTGGTCCGATAAGTCTGTCTGTCGGTCGGTCAGTTCTTACCGGGTCTGCCATGGTTCCTTTCGGTCTTAAATGGGGCTCAGCGTCTGCCGCTGGTACGCCGTTAGCTCCGGGTGCCACACGTCCACGATGAAGATGAGCCGGTAACGGTCGGCGTCCTGCCAGACCTCGTGCTCGAAGGAGTCGTCGAAGATCAGGACTTTACCTTCCTCCC
>TU302401
aggttttgatttttttcagtatttatttatttatttgtttgtttttattagtttttaatataaatataaatcttCTTTTTAACATCTTGAGTTTCGTTGTTTTTGGTGCAAacgtgaagaaaaaaaatcagaacCGTACGGAGACAGTTTCATCTTTTAGTGTTTCAACTCTCGTTTCACAATTCATCTCCAAAATATGGACGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATTTAGAGATCAGACATTTAGAGATCAGAGAGATTTAGAGATCAGAGAGATGTAGAGATCAGAGAGATGTAGAGATCAGAGAGATGTAGAGATCAGAGAGATGGTTTTGGGATTCGAGACCCAGAAACTATTCGTGAGGtttgggaaaagaaaagaagaaatctGGCTCTGCGGATAACGTCCGTAACTTTCCCAAAAACATTTCCACCCGTTCAGAAGGAGTCCATGACTGTTGGTACCTTGAACCTGGTCCAAACAGGGTTAACCCAGgctaaagaagaagagaagaggggagaaagagaggaagaacgAGAGAAGAgtagaggaaggagagaagatgagagaaagagaggaaggagagaagaggagagaaagagaggaagaaggagaaaagagaaagagaggaaggagagaagagtagaggaaggagagaagatgagagaaagagaggaaggagagaagaggagagaaagagaggaagagggagagaagagaaagagaggaaggagagaagagtagaggaagaaggagagaagatgagagaaagagaggaaggagagaagaggagagaaagagaggaaggagagaagaggagataaaataagagaaagaggaaagagagaagaggagagaaagagaggaaggagagaagagataaagagaggaagagaggaaggagagaagagataaagagaggaaggagaggagagaaaaggagagaaagagaggaaggagaggagagaaaaggagagaaagagaggaagaaagagaggaaggagcgaagagagaaagagaggaagaaggagagaagagagaaagagaggaagaaagagaggaaggagagataatgagagacagagagaggaaggagaggagcgaaagagagaagaggagagaaaaaggaaggagagaagaaggaGCGTAAGACaggaagaaggagagaaagagagaagaggagagtacgacaggaagaaggagagaaagagagaagaggagagaaagacaggaagaaggagaaaaaaagagagaaccaATCATGACGTTCGGGAGAAGAAGAAAGCTGGCTCTGCAGATTACATCCATGACTGTTGGTACCTTGAACCCGGTCCAAACAGGGCTAACCCGGTCCAAACAAGGCTAACCCGGGTTAAATCCGGGCTAAAACAAGTACTCttatgtttgcttttttttgggcGAAAGGTTGTAACGTCAGTAGTAACTTTTTCATTTCTTCGGTCCGAGCGTTTGATCCTTCGACAGACAATCATTTAGTTCATCCTCACGCACAAAAcggcaaaaacaacaacaaaaaaaactccattaaTCCACCGAGGGAAGGAGCGCCTGGTCCGATAAGTCTGTCTGTCGGTCGGTCAGTTCTTACCGGGTCTGCCATGGTTCCTTTCGGTCTTAAATGGGGCTCAGCGTCTGCCGCTGGTACGCCGTTAGCTCCGGGTGCCACACGTCCACGATGAAGATGAGCCGGTAACGGTCGGCGTCCTGCCAGACCTCGTGCTCGAAGGAGTCGTCGAAGATCAGGACTTTACCTTCCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302400 True 2278 lncRNA 0.43 2 26468422 26470795
TU302401 False 1991 lncRNA 0.43 2 26468422 26470795

Neighbor

gene id symbol gene type direction distance location
trnai-aau_34 NA coding downstream 590 26467759 ~ 26467832 (-)
trnai-aau_33 NA coding downstream 1202 26467147 ~ 26467220 (-)
trnai-aau_32 NA coding downstream 1912 26466437 ~ 26466510 (-)
trnai-aau_31 NA coding downstream 18506 26449843 ~ 26449916 (-)
trnai-aau_30 NA coding downstream 20663 26447686 ~ 26447759 (-)
ssr1 ssr1,LOC104966062 coding upstream 474655 26945450 ~ 26968414 (-)
LOC120552563 NA coding upstream 502052 26972847 ~ 26980874 (-)
LOC120552564 nebl coding upstream 516530 26987325 ~ 27054360 (-)
LOC120552734 nebl coding upstream 576032 27046827 ~ 27129394 (-)
LOC120552735 nebl coding upstream 665976 27136771 ~ 27189544 (-)
G223455 NA non-coding downstream 5377 26461326 ~ 26463045 (-)
G223371 NA non-coding downstream 361435 26106712 ~ 26106987 (-)
G223348 NA non-coding downstream 381742 26026105 ~ 26086680 (-)
G223363 rpl22l1 non-coding downstream 394480 26071089 ~ 26073942 (-)
G223354 NA non-coding downstream 432621 26035415 ~ 26035801 (-)
G223464 NA non-coding upstream 84058 26554853 ~ 26558519 (-)
G223471 NA non-coding upstream 122246 26593041 ~ 26658273 (-)
G223463 NA non-coding upstream 130428 26601223 ~ 26656318 (-)
G223466 NA non-coding upstream 140462 26611257 ~ 26629018 (-)
G223462 NA non-coding upstream 143609 26614404 ~ 26631568 (-)
G223433 NA other downstream 59065 26404001 ~ 26409357 (-)
G223395 cul1,LOC107713664 other downstream 250098 26216885 ~ 26218324 (-)
G223350 NA other downstream 338300 26059997 ~ 26130122 (-)
G223351 NA other downstream 409360 26054519 ~ 26059062 (-)
G223331 LOC101483661,LOC101069443,LOC103355338,LOC108249550 other downstream 470490 25983594 ~ 25997932 (-)
G223435 NA other upstream 909 26471704 ~ 26475911 (-)
LOC120552560 NA other upstream 13134 26483929 ~ 26510127 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other upstream 88640 26559435 ~ 26906332 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other upstream 633803 27104598 ~ 27188218 (-)
G223538 NA other upstream 687178 27157973 ~ 27483161 (-)

Expression


Co-expression Network