G223449


Basic Information

Item Value
gene id G223449
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26433309 ~ 26494229 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302417
agacacacacacacacacacacacagagacacacagagacacacacacacacacacagagaaacacagagacacacacacacacacacacacacacaggagacacacacacacacacacacagagaaacacagagacacacacacacacacacacacacacacacacacacacagacacacacacacacagacacacacacagacacacacacacacagagacacacacacacacacacacacacacagagaaacacagacacacagacacacacacacacacacacacacacacacacacacacacacacacacagaaacacacacacacacacacacagagacacacacacagacacacacacacagagacacacacacacacacacacacacagagacacacacacagagacacacacacacacacagagacacacagagacacacacacacagagacacacacacagagacacacacatacacacagagacacacacacagagacacacacacacacagagacacacacacagacacacagagacacacacacagacacacagagacacacacacagacacacacagagacacacacacacacacagagacacacacacagacacacagagacacacacacacacacagagacacacagagacacacacacacacagagacacacacacacagagacacacagagacacacacacacagacacacacatacaaagacacacacacacagagacacacaaagacacacacattattttatttttttattatcaaataacatacagtatgtcccaTCCCATAATGC
>TU302420
acagatacacacacacacacacacacacagacacacagagacacacacacagacacacagagacacacacacagacacacacagagacacacacacacacacagagacacacacacagacacacagagacacacacacacagacacacagagacacacacacacagacacacacatacaaagacacacacacacagagacacacaaagacacacacattattttatttttttattatcaaataacatacagtatgtcccaTCCCATAATGC
>TU302421
agacacacacacacacacacacacagagacacacagagacacacacacacacacacagagaaacacagagacacacacacacacacacacacacacaggagacacacacacacacacacacagagaaacacagagacacacacacacacacacacacacacacacacacacacagacacacacacacacagacacacacacagacacacacacacagacacacacacagacacacacacacagagacacacacacacacacacacacacagagacacacacacagagacacacacacacacacagagacacacagagacacacacacagagacacacacacagagacacacacacacacagagacacacacacagacacacagagacacacacacagacacacagagacacacacacagacacacacacacacagacacagacacacacacacacacacagacaacacacacacacacacacatac
>TU302422
agacacacacacacacacacacacagagacacacagagacacacacacacacacacagagaaacacagagacacacacacacacacacacacacacaggagacacacacacacacacacacagagaaacacagagacacacacacacacacacacacacacacacacacacacagacacacacacacacagacacacacacagacacacacacacacagagacacacacacacacagagacacacacacagagacacacacacagagacacacacacacagagacacacacacagagacacacacacagagacacacacacacagactcacctcacacacagactcactcacgcacacagacacagacacacacacacacacacagacaacacacacacacacacacatac
>TU302423
gacacacacactcacacacacagagacacacacacagacacacacacacagagacacacacacacacacacacacacagagacacacacacagagacacacacacacacacagagacacacagagacacacacacagagacacacacacagagacacacacacacagagacacacacacagagacacacacacagagacacacacacacagactcacctcacacacagactcactcacgcacacagacacagacacacacacacacacacagacaacacacacacacacacacatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302417 True 828 lncRNA 0.47 2 26463293 26464216
TU302420 False 271 lncRNA 0.43 3 26463293 26494229
TU302421 False 486 lncRNA 0.49 4 26433309 26464216
TU302422 False 411 lncRNA 0.50 4 26433309 26464216
TU302423 False 297 lncRNA 0.50 4 26433309 26476967

Neighbor

gene id symbol gene type direction distance location
riok3 riok3 coding downstream 57547 26352631 ~ 26375762 (-)
rmc1 clg3h18orf8,LOC104932202,LOC103368274,LOC101473408,LOC102288614,LOC103129440 coding downstream 87576 26323493 ~ 26345733 (-)
si:ch211-230g15.5 LOC103369797,LOC102301809,LOC102203330,LOC100701790 coding downstream 285286 26110407 ~ 26148023 (-)
cldn11b cldn11,LOC104933881,LOC104940783 coding downstream 323282 26100888 ~ 26110027 (-)
lrrc34 NA coding downstream 620526 25797285 ~ 25812783 (-)
ssr1 ssr1,LOC104966062 coding upstream 451221 26945450 ~ 26968414 (-)
LOC120552563 NA coding upstream 478618 26972847 ~ 26980874 (-)
LOC120552564 nebl coding upstream 493096 26987325 ~ 27054360 (-)
LOC120552734 nebl coding upstream 552598 27046827 ~ 27129394 (-)
LOC120552735 nebl coding upstream 642542 27136771 ~ 27189544 (-)
G223371 NA non-coding downstream 326322 26106712 ~ 26106987 (-)
G223348 NA non-coding downstream 346629 26026105 ~ 26086680 (-)
G223363 rpl22l1 non-coding downstream 359367 26071089 ~ 26073942 (-)
G223354 NA non-coding downstream 397508 26035415 ~ 26035801 (-)
G223347 NA non-coding downstream 409814 26022960 ~ 26023495 (-)
G223464 NA non-coding upstream 60624 26554853 ~ 26558519 (-)
G223471 NA non-coding upstream 98812 26593041 ~ 26658273 (-)
G223463 NA non-coding upstream 106994 26601223 ~ 26656318 (-)
G223466 NA non-coding upstream 117028 26611257 ~ 26629018 (-)
G223462 NA non-coding upstream 120175 26614404 ~ 26631568 (-)
G223433 NA other downstream 23952 26404001 ~ 26409357 (-)
G223395 cul1,LOC107713664 other downstream 214985 26216885 ~ 26218324 (-)
G223350 NA other downstream 303187 26059997 ~ 26130122 (-)
G223351 NA other downstream 374247 26054519 ~ 26059062 (-)
G223328 NA other downstream 390445 25981460 ~ 26042864 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other upstream 65206 26559435 ~ 26906332 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other upstream 610369 27104598 ~ 27188218 (-)
G223538 NA other upstream 663744 27157973 ~ 27483161 (-)
LOC120552569 NA other upstream 764144 27258373 ~ 28498012 (-)
rreb1a rreb1 other upstream 1021731 27515960 ~ 27625569 (-)

Expression


Co-expression Network