LOC120552560


Basic Information

Item Value
gene id LOC120552560
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26483929 ~ 26510127 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302432
GGACAACTCGTAGCTTCATCAGTGAGAGCAGAGAAACGTAAAGCGACAAGGAGCGCGTACTTCGTTCATGTTTTTTGTCATAATTGCAGTTAAGTTAGCTTGTTAGTTCGTAGCTGCATAACTGACGAATTGCATCCGCGAATTTGCGAAGCAATGGCCCAGAAAAAGACTCCCAAATCCCACTCCAAAAAAGAGGGGAAGACGACGCCGGTGGAAAGCAAGAATGGAAAGAGGACGGagagaggagcagcagcaggaggaggaggtggagacgcggcagcagcagcaggaggaggctCGAAGTACTCCATGTTCACCTGGTTCGTGGTCCTGGCTCTGCTGGGAGTCTGGAGCTCCGTGGCCGTGGTCTACTTCGATGTCGTGGACTACGACAGCGTCATCGGGAAACTGACTGCCTACGACACCGACGGAGACGGAGACTTTGACGTGGAAGATGCTAAAGTTCTGCTCGG
>TU302433
GGACAACTCGTAGCTTCATCAGTGAGAGCAGAGAAACGTAAAGCGACAAGGAGCGCGTACTTCGTTCATGTTTTTTGTCATAATTGCAGTTAAGTTAGCTTGTTAGTTCGTAGCTGCATAACTGACGAATTGCATCCGCGAATTTGCGAAGCAATGGCCCAGAAAAAGACTCCCAAATCCCACTCCAAAAAAGAGGGGAAGACGACGCCGGTGGAAAGCAAGAATGGAAAGAGGACGGagagaggagcagcagcaggaggaggaggtggagacgcggcagcagcagcaggaggaggctCGAAGTACTCCATGTTCACCTGGTTCGTGGTCCTGGCTCTGCTGGGAGTCTGGAGCTCCGTGGCCGTGGTCTACTTCGATGTCGTGGACTACGACAGCGTCATCGCCAGAGCTAAGGAGTTCCACATGAACTTTTCTGAAGTTTTACAAGGGAAACTGACTGCCTACGACACCGACGGAGACGGAGACTTTGACGTGGAAGATGCTAAAGTTCTGCTCGG
>TU302435
ggagctctctctttctcctgctcCGCTCAGACACCTTCTGTTCTCCTTGTCGGGCGATCAAAACTTTGGAATATTTCTTCTTTGGGATTGTTTTCATCTCTTCGCGCCACCTCTTCGATTCAGTACTGTTATAAACTTTTTGTGAAGTACTTTTTTGGAaagttttaaatacttttttggtgCTTTAATTCGTCTTTtttctagggctgctccctcttagtcgattagtcgactaatcggtcgtttttggtcttagtcaacttagatttctttagtccattagtcatgtttgatgcttttttcatgctgaatgacttatttccaagaaacgtacgagcacatctctggtaaacaagaattaaagtggtgcttttagcatgactctttgtggagaaactcagatttacagatctgtcgattaaatcgactaatcgattagtcgatacaattgagtgttagtcgactaagaatttcttcaatcgagcacagccctacttttTTCAATCTGGTTTTATCTGGTACTTACACATCGTGTGTTCGTCACTTCATAGTCTGaaataaatattctaaattAGTTTTTATGGCGGTTTAGTGTGCAGCACACGGTGTGTCTCTGCCGTCCGGCCTGGTTACTGGCCCGGCTCGGCTCGGCCcggtttttgtttttggggggggtttcGGCTGAGATCGGAGACGGTCCATGCAGCGCTACCGTCATTATGGCTCCTCCTACCCTCCTTCCCCCTCCTCCGCTCCCGTAGAGGAGATCCACgccgaagaggaggaggaggaggaggaggtgttcACTGAAGAGGTCTATGAGGAGGAGGCGGAGCCTCTGATACAGAAGGAGGCGGAGCCTGTGGTGCAGGAGACAGGAGGTGTTAATGGGGAGGAGGTCGCACAGACGAAGGAGGAAGAGCAGCCTGACGTCCAGGAGACAGAGGGGAAGACGACGCCGGTGGAAAGCAAGAATGGAAAGAGGACGGagagaggagcagcagcaggaggaggaggtggagacgcggcagcagcagcaggaggaggctCGAAGTACTCCATGTTCACCTGGTTCGTGGTCCTGGCTCTGCTGGGAGTCTGGAGCTCCGTGGCCGTGGTCTACTTCGATGTCGTGGACTACGACAGCGTCATCGCCAGAGCTAAGGAGTTCCACATGAACTTTTCTGAAGTTTTACAAGGGAAACTGACTGCCTACGACACCGACGGAGACGGAGACTTTGACGTGGAAGATGCTAAAGTTCTGCTCGG
>XM_039790719.1
actaatcgattagtcgatacaattgagtgttagtcgactaagaatttcttcaatcgagcacagccctacttttTTCAATCTGGTTTTATCTGGTACTTACACATCGTGTGTTCGTCACTTCATAGTCTGaaataaatattctaaattAGTTTTTATGGCGGTTTAGTGTGCAGCACACGGTGTGTCTCTGCCGTCCGGCCTGGTTACTGGCCCGGCTCGGCTCGGCCcggtttttgtttttggggggggtttcGGCTGAGATCGGAGACGGTCCATGCAGCGCTACCGTCATTATGGCTCCTCCTACCCTCCTTCCCCCTCCTCCGCTCCCGTAGAGGAGATCCACgccgaagaggaggaggaggaggaggaggtgttcACTGAAGAGGTCTATGAGGAGGAGGCGGAGCCTCTGATACAGAAGGAGGCGGAGCCTGTGGTGCAGGAGACAGGAGGTGTTAATGGGGAGGAGGTCGCACAGACGAAGGAGGAAGAGCAGCCTGACGTCCAGGAGACAGAGGGGAAGACGACGCCGGTGGAAAGCAAGAATGGAAAGAGGACGGagagaggagcagcagcaggaggaggaggtggagacgcggcagcagcagcaggaggaggctCGAAGTACTCCATGTTCACCTGGTTCGTGGTCCTGGCTCTGCTGGGAGTCTGGAGCTCCGTGGCCGTGGTCTACTTCGATGTCGTGGACTACGACAGCGTCATCGCCAGAGCTAAGGAGTTCCACATGAACTTTTCTGAAGTTTTACAAGGGAAACTGACTGCCTACGACACCGACGGAGACGGAGACTTTGACGTGGAAGATGCTAAAGTTCTGCTCGGCAAGTCCACTTTCATTTTCCTTTATTCTCTCCGTTTTTTGTGCCTGTTTTTGTGCGTGTGAAGCCTGACTGATGTGGTTTACGGTTGTGTCCCAGTGCCTCAGTTTTAAAATGGTAACCAGTCTTCTGACTTACTGCGATGTGAACTCTGACTACAGCAGTGAGTGATCACTCAAGTTTTCATTGCCTGTTAGAAGTAAAAATCTGCAGCGTGATTATTAGTGCTTGAGGAGATGTTCACAGAAAGAGTGGGCGCCTCCTGATGTTATAGGAGGTGTAAAAGCAGCCTGGACTAAGTAAGGactaa
>XM_039790720.1
actaatcgattagtcgatacaattgagtgttagtcgactaagaatttcttcaatcgagcacagccctacttttTTCAATCTGGTTTTATCTGGTACTTACACATCGTGTGTTCGTCACTTCATAGTCTGaaataaatattctaaattAGTTTTTATGGCGGTTTAGTGTGCAGCACACGGTGTGTCTCTGCCGTCCGGCCTGGTTACTGGCCCGGCTCGGCTCGGCCcggtttttgtttttggggggggtttcGGCTGAGATCGGAGACGGTCCATGCAGCGCTACCGTCATTATGGCTCCTCCTACCCTCCTTCCCCCTCCTCCGCTCCCGTAGAGGAGATCCACgccgaagaggaggaggaggaggaggaggtgttcACTGAAGAGGTCTATGAGGAGGAGGCGGAGCCTCTGATACAGAAGGAGGCGGAGCCTGTGGTGCAGGAGACAGGAGGTGTTAATGGGGAGGAGGTCGCACAGACGAAGGAGGAAGAGCAGCCTGACGTCCAGGAGACAGAGGGGAAGACGACGCCGGTGGAAAGCAAGAATGGAAAGAGGACGGagagaggagcagcagcaggaggaggaggtggagacgcggcagcagcagcaggaggaggctCGAAGTACTCCATGTTCACCTGGTTCGTGGTCCTGGCTCTGCTGGGAGTCTGGAGCTCCGTGGCCGTGGTCTACTTCGATGTCGTGGACTACGACAGCGTCATCGGGAAACTGACTGCCTACGACACCGACGGAGACGGAGACTTTGACGTGGAAGATGCTAAAGTTCTGCTCGGCAAGTCCACTTTCATTTTCCTTTATTCTCTCCGTTTTTTGTGCCTGTTTTTGTGCGTGTGAAGCCTGACTGATGTGGTTTACGGTTGTGTCCCAGTGCCTCAGTTTTAAAATGGTAACCAGTCTTCTGACTTACTGCGATGTGAACTCTGACTACAGCAGTGAGTGATCACTCAAGTTTTCATTGCCTGTTAGAAGTAAAAATCTGCAGCGTGATTATTAGTGCTTGAGGAGATGTTCACAGAAAGAGTGGGCGCCTCCTGATGTTATAGGAGGTGTAAAAGCAGCCTGGACTAAGTAAGGactaa
>XM_039790721.1
actaatcgattagtcgatacaattgagtgttagtcgactaagaatttcttcaatcgagcacagccctacttttTTCAATCTGGTTTTATCTGGTACTTACACATCGTGTGTTCGTCACTTCATAGTCTGaaataaatattctaaattAGTTTTTATGGCGGTTTAGTGTGCAGCACACGGTGTGTCTCTGCCGTCCGGCCTGGTTACTGGCCCGGCTCGGCTCGGCCcggtttttgtttttggggggggtttcGGCTGAGATCGGAGACGGTCCATGCAGCGCTACCGTCATTATGGCTCCTCCTACCCTCCTTCCCCCTCCTCCGCTCCCGTAGAGGAGATCCACgccgaagaggaggaggaggaggaggaggtgttcACTGAAGAGGTCTATGAGGAGGAGGCGGAGCCTCTGATACAGAAGGAGGCGGAGCCTGTGGTGCAGGAGACAGAGGGGAAGACGACGCCGGTGGAAAGCAAGAATGGAAAGAGGACGGagagaggagcagcagcaggaggaggaggtggagacgcggcagcagcagcaggaggaggctCGAAGTACTCCATGTTCACCTGGTTCGTGGTCCTGGCTCTGCTGGGAGTCTGGAGCTCCGTGGCCGTGGTCTACTTCGATGTCGTGGACTACGACAGCGTCATCGCCAGAGCTAAGGAGTTCCACATGAACTTTTCTGAAGTTTTACAAGGGAAACTGACTGCCTACGACACCGACGGAGACGGAGACTTTGACGTGGAAGATGCTAAAGTTCTGCTCGGCAAGTCCACTTTCATTTTCCTTTATTCTCTCCGTTTTTTGTGCCTGTTTTTGTGCGTGTGAAGCCTGACTGATGTGGTTTACGGTTGTGTCCCAGTGCCTCAGTTTTAAAATGGTAACCAGTCTTCTGACTTACTGCGATGTGAACTCTGACTACAGCAGTGAGTGATCACTCAAGTTTTCATTGCCTGTTAGAAGTAAAAATCTGCAGCGTGATTATTAGTGCTTGAGGAGATGTTCACAGAAAGAGTGGGCGCCTCCTGATGTTATAGGAGGTGTAAAAGCAGCCTGGACTAAGTAAGGactaa

Function

GO:

id name namespace
GO:0009435 NAD biosynthetic process biological_process
GO:0019674 NAD metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302432 False 473 TUCP 0.53 3 26484235 26510127
TU302433 False 518 TUCP 0.52 4 26484235 26510127
TU302435 True 1269 TUCP 0.49 5 26484235 26503153
XM_039790719.1 False 1149 mRNA 0.51 5 26483929 26502727
XM_039790720.1 False 1104 mRNA 0.52 4 26483929 26502727
XM_039790721.1 False 1083 mRNA 0.51 4 26483929 26502727

Neighbor

gene id symbol gene type direction distance location
trnai-aau_34 NA coding downstream 16097 26467759 ~ 26467832 (-)
trnai-aau_33 NA coding downstream 16709 26467147 ~ 26467220 (-)
trnai-aau_32 NA coding downstream 17419 26466437 ~ 26466510 (-)
trnai-aau_31 NA coding downstream 34013 26449843 ~ 26449916 (-)
trnai-aau_30 NA coding downstream 36170 26447686 ~ 26447759 (-)
ssr1 ssr1,LOC104966062 coding upstream 435323 26945450 ~ 26968414 (-)
LOC120552563 NA coding upstream 462720 26972847 ~ 26980874 (-)
LOC120552564 nebl coding upstream 477198 26987325 ~ 27054360 (-)
LOC120552734 nebl coding upstream 536700 27046827 ~ 27129394 (-)
LOC120552735 nebl coding upstream 626644 27136771 ~ 27189544 (-)
G223436 NA non-coding downstream 13134 26468422 ~ 26470795 (-)
G223455 NA non-coding downstream 20884 26461326 ~ 26463045 (-)
G223371 NA non-coding downstream 376942 26106712 ~ 26106987 (-)
G223348 NA non-coding downstream 397249 26026105 ~ 26086680 (-)
G223464 NA non-coding upstream 44726 26554853 ~ 26558519 (-)
G223471 NA non-coding upstream 82914 26593041 ~ 26658273 (-)
G223463 NA non-coding upstream 91096 26601223 ~ 26656318 (-)
G223466 NA non-coding upstream 101130 26611257 ~ 26629018 (-)
G223462 NA non-coding upstream 104277 26614404 ~ 26631568 (-)
G223435 NA other downstream 8018 26471704 ~ 26475911 (-)
G223433 NA other downstream 74572 26404001 ~ 26409357 (-)
G223395 cul1,LOC107713664 other downstream 265605 26216885 ~ 26218324 (-)
G223350 NA other downstream 353807 26059997 ~ 26130122 (-)
G223351 NA other downstream 424867 26054519 ~ 26059062 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other upstream 49308 26559435 ~ 26906332 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other upstream 594471 27104598 ~ 27188218 (-)
G223538 NA other upstream 647846 27157973 ~ 27483161 (-)
LOC120552569 NA other upstream 748246 27258373 ~ 28498012 (-)
rreb1a rreb1 other upstream 1005833 27515960 ~ 27625569 (-)

Expression


Co-expression Network