G223516 (LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419)


Basic Information

Item Value
gene id G223516
gene name LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27104598 ~ 27188218 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302546
GACGGTGAGTCGCTGAGTGAGGGAGCAGAGCCGCCGTTTCTCCGCTACGTTTCCatctttttttcccactttgTTTACAGTGTGAAGAGTGGCTCAGCGGAGACATTTTGGGACTTTCGTTCTGGACAACATTTTACATCTCTCGAATAACAAGTGGAATTAAGCCTTTGGGGAGCACAGAGGAGGTTTGGGAGGATGAACCCCCAGTGTGCCCGCTGTGGGAAGATTGTCTACCCGACGGAGAAAGTCAGCTGCCTGGACAAGAACTGGCATAAAGGATGCTTCCACTGCGAGGTTTGTAAGATGACCCTGAACATGAAGAACTACAAAGGCTACGACAAGAAGCCCTACTGCAATGCACATTACCCCAAGACGTCGTTCACCACCGTGGCCGACACACCAGAGAACCTGAGACTGAGACAGCAGAGTGAGCTACAGagccagGTGAAGTATAAGGAGGACCTTGAGAAGATGCGAGGTCAGAGTCTGTTTGTTCCTGGAGCCGAACTCATCCACTCCAAGAACATCAGCGCTGTGATATCTGagTCGAAGTAcaaagaggagggaaggaaggaggcgTCCATGTCTCTGTACTCGGTCCTGGCAGAGACCCCCGAGACCCAGCACGCCAGAGAGGCTTCAGAGCTGCAGAGCGAGAACAAGTACAAGGAGGAAGGGAAGAAGGAGATGAGCAGCAGTTTGTACTCTCAGCTTCCCGAAACCAGCGAGACGCAGCTGGCCAAAGCTGTCCACCAGTTTCAGAGCGAGGTACTCCAacacgat

Function

NR:

description
PREDICTED: nebulette-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302546 True 783 TUCP 0.52 6 27104598 27188218

Neighbor

gene id symbol gene type direction distance location
LOC120552564 nebl coding downstream 50238 26987325 ~ 27054360 (-)
LOC120552563 NA coding downstream 123724 26972847 ~ 26980874 (-)
ssr1 ssr1,LOC104966062 coding downstream 136184 26945450 ~ 26968414 (-)
trnai-aau_34 NA coding downstream 636766 26467759 ~ 26467832 (-)
trnai-aau_33 NA coding downstream 637378 26467147 ~ 26467220 (-)
LOC120552579 NA coding upstream 7112 27195330 ~ 27205153 (-)
LOC120552591 NA coding upstream 35536 27223754 ~ 27224992 (-)
LOC120552593 NA coding upstream 121794 27310012 ~ 27312365 (-)
LOC120552567 NA coding upstream 1115116 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 1188861 28377079 ~ 29112293 (-)
G223534 NA non-coding downstream 16401 27087733 ~ 27088197 (-)
G223518 NA non-coding downstream 45094 27005323 ~ 27059504 (-)
G223515 NA non-coding downstream 112848 26982784 ~ 26991750 (-)
G223522 NA non-coding downstream 127304 26976478 ~ 26977294 (-)
LOC120552561 NA non-coding downstream 175577 26917333 ~ 26929021 (-)
G223552 NA non-coding upstream 65280 27253498 ~ 27254197 (-)
G223551 NA non-coding upstream 67642 27255860 ~ 27264163 (-)
G223554 NA non-coding upstream 79030 27267248 ~ 27267746 (-)
G223555 NA non-coding upstream 87073 27275291 ~ 27277548 (-)
G223559 NA non-coding upstream 87530 27275748 ~ 27299292 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 198266 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 594471 26483929 ~ 26510127 (-)
G223435 NA other downstream 628687 26471704 ~ 26475911 (-)
G223433 NA other downstream 695241 26404001 ~ 26409357 (-)
G223395 cul1,LOC107713664 other downstream 886274 26216885 ~ 26218324 (-)
LOC120552569 NA other upstream 70155 27258373 ~ 28498012 (-)
rreb1a rreb1 other upstream 327742 27515960 ~ 27625569 (-)
G223640 NA other upstream 452346 27640564 ~ 27685979 (-)
LOC120552596 NA other upstream 506122 27694340 ~ 27700381 (-)
G223645 NA other upstream 550564 27738782 ~ 27739972 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_038507 CABZ01092072.2 coding NW_003336404.2 KN150170.1 36770 ~ 44030 (+)