G223559



Basic Information


Item Value
gene id G223559
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27275748 ~ 27299292 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU302603
CTTTCCAGAGTGTGTGTCTCAGCTTCTTCTCTCCGTGTGGAGCTCCAGTTGAAGctAACAGCCATAGACTTGTGGAAAGTCTTTGGTGTGGCGTTCACGGGACAGAGGAagaacacacactgacaacaacaaccacagtcacacagagagaaggaaccaagctcttattgtgaaagtctGCTTCCTGTCAGGTGGAGCTGTGACtcatcagaaaaaaacaccTGAGTTGTTCTACGTCGCAATTTTGGACTTTTGATgaaactgtaagttgctgtttgatacttCAACAACATGCTTAGAGTACTTTTACTACAGTAACATGTCTGAAtactttaatctcagaaggaAAGCTTGTACTTCTTCTTGTCctccatttatctgacagcgTGTTACTCTGCACATTCACAGTTTACACACAAAGTCTTAATCAGCAGTAAGACATGATGTAATGTTCCAGAGAATCAGCTCTCTCACTGCTCCTTCTACATCAAGTACATTTACTAACAGAGCAGGACGATGGACTGAGTATTTTCACCATGTAGTATTAATAGTTTGGAGTTCTTCTTCCACTGCGTCACTGTGTCTGTTGAATCATAAAGTTTGTTGGtcacattttaaacatattataaTTTAACATAACCTATATACAGCCTGTTACACTTAGatgaatgaataataaaataatggttagttgcagccctagaactTAATGAATCAGGACTTTTTCTCCAAGTCCAGCCTCAGTTGTTGCCTCACGTTCTGAACATTGGAGTCACAGAGCtaagaatatatattttaagataAACTCCTAATCATGTTCACTATACACATCATCACTATTCATCTGCCCGCTGCACATAGACTATATTATGTTTTACCCATCCTGCACTCAACCATT

Function


GO: NA

KEGG:

id description
ko05145 Toxoplasmosis

RNA


RNA id representative length rna type GC content exon number start site end site
TU302603 True 898 lncRNA 0.39 3 27275748 27299292

Neighbor


gene id symbol gene type direction distance location
LOC120552591 NA coding downstream 50756 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 70595 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 86204 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 146354 27046827 ~ 27129394 (-)
LOC120552564 nebl coding downstream 221388 26987325 ~ 27054360 (-)
LOC120552593 NA coding upstream 10720 27310012 ~ 27312365 (-)
LOC120552567 NA coding upstream 1004042 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 1077787 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 1630939 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 1825922 29125214 ~ 29147661 (-)
G223554 NA non-coding downstream 8002 27267248 ~ 27267746 (-)
G223551 NA non-coding downstream 11585 27255860 ~ 27264163 (-)
G223552 NA non-coding downstream 21551 27253498 ~ 27254197 (-)
G223517 NA non-coding downstream 127741 27044837 ~ 27148007 (-)
G223563 NA non-coding upstream 1584 27300876 ~ 27301518 (-)
G223578 NA non-coding upstream 60530 27359822 ~ 27364272 (-)
G223579 NA non-coding upstream 61182 27360474 ~ 27365071 (-)
G223585 NA non-coding upstream 123126 27422418 ~ 27438870 (-)
G223587 NA non-coding upstream 125437 27424729 ~ 27451993 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other downstream 87530 27104598 ~ 27188218 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 369416 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 765621 26483929 ~ 26510127 (-)
G223435 NA other downstream 799837 26471704 ~ 26475911 (-)
G223433 NA other downstream 866391 26404001 ~ 26409357 (-)
rreb1a rreb1 other upstream 216668 27515960 ~ 27625569 (-)
G223640 NA other upstream 341272 27640564 ~ 27685979 (-)
LOC120552596 NA other upstream 395048 27694340 ~ 27700381 (-)
G223645 NA other upstream 439490 27738782 ~ 27739972 (-)
G223665 fars2 other upstream 451413 27750705 ~ 27754334 (-)

Expression



Co-expression Network