G223585


Basic Information

Item Value
gene id G223585
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27422418 ~ 27438870 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302645
tcatcatcatctctggATGAGTACTGAAGGGTGGAAGGACCAGGTGTTGCATGCAGCTCCATTTCCCTGGTATTATCCTGACTGACTCCTGACGTAGAAGCTgcttcattttttattatttctttttctgtgaGGGAACCAGGTGGAGGTCGACCTAACTTGTAGTCAGAGGAATCAGTCGTAGAAAATAAGCTATGGGGATCATCAGTGGTAAAAGGAATACTAAAGGGACTTGTCTTATTTATCTTCTGTCTTCTAAAAATCATGCCTCTGGATTTTCTCTTCCAGGGTTCATTAATCAAAGAGGACTGTCGGTCGGGACGACGGGGAGGCTGCCCAGTTTTATGATTGCGGCTCAGTGAAGAGTAACACTCAGGTTTTGGATCTGTGCCAAAGTCCCTTCCTGTCTGGATAGGATGACGATCAGGTAAATGCAGGTTAAAGTCTATGTCAGACCAACATTTAAGTGCTGCGCCcacataatcataataataagtGTAGACAGGGATATTTGGAGAATCACTGCCAAGTTCCACAgagatttgttttaaagtaATGTCTGGTGAGCTATTTGCTCCTGTGAAGCTGTTTCTCATTGAGTGTGCAGTATTAGGAAGAAAGTTGCTGccttttttacttttggtaGATAAATCTACAGACTGTTTaatgtcagaatcagaataaggatactttattaaataataaGACAGAGGGCTTTCAGATGAGTCGTGCTCAGCAGGAACATGTGGCAACATTTGTTCAATGAAATTATGATCCCCTCCAGGCTCACTTTGTGACTCCACCggaaatgacttttttttttttttttttttttttttttttttttttttttttttttttttttttttttctagtgcTGGAGCTGCAGAGTTGAACATTAAAATATTTAGATTGAGGAGGTTGAAACATACTTGAGAAATTTAGATCATTTAGAGGATCATGTAGCTCTGGGTCACACTGGATGTCTTTGTCAAGATGGACAGTTGTGTGTAAAGCCTGATCTCTTTTCTCTCCCAATTCAGCTTCAGTTTTGCTGCTGCTTGCTGAGTCAATTGATTGGTGAGGGGAGGACAAAATGGGGAAAGGTTGAATTTTAGCTGCAGAACTGCCTTCATGTTGGCCTAGTATCTTAAACTGAACCTCCTCCTCTGAAAACTTCTCATCTGCATTTATCTCTTTTTCTGAGATCAAAATTGGACTTCCTTGAATCTTTAAGTCATTTCTGTCTTCATTgaactcttcctcctcctccatctgtgATGCGTCACCTGCCCTCTCACAACTGCCTGCGTCATACTCAGCAGAGGAGGGCAAGGAAACTTTTGTCTTCTTTCGTTCCATCTTTCAACTTGATTTCACACAGAAACCTTTAAAACATCTTCTTCATGTTGGctgctgttttttcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302645 True 1429 lncRNA 0.40 2 27422418 27438870

Neighbor

gene id symbol gene type direction distance location
LOC120552593 NA coding downstream 110053 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 197426 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 217265 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 232874 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 293024 27046827 ~ 27129394 (-)
LOC120552567 NA coding upstream 864464 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 938209 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 1491361 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 1686344 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 1712564 29151434 ~ 29161971 (-)
G223579 NA non-coding downstream 57347 27360474 ~ 27365071 (-)
G223578 NA non-coding downstream 58146 27359822 ~ 27364272 (-)
G223563 NA non-coding downstream 120900 27300876 ~ 27301518 (-)
G223559 NA non-coding downstream 123126 27275748 ~ 27299292 (-)
G223555 NA non-coding downstream 144870 27275291 ~ 27277548 (-)
G223608 NA non-coding upstream 89530 27528400 ~ 27584765 (-)
G223609 NA non-coding upstream 93873 27532743 ~ 27592465 (-)
G223613 NA non-coding upstream 109375 27548245 ~ 27548734 (-)
G223607 NA non-coding upstream 122866 27561736 ~ 27585514 (-)
G223617 NA non-coding upstream 135443 27574313 ~ 27574614 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other downstream 234200 27104598 ~ 27188218 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 516086 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 912291 26483929 ~ 26510127 (-)
G223435 NA other downstream 946507 26471704 ~ 26475911 (-)
G223433 NA other downstream 1013061 26404001 ~ 26409357 (-)
rreb1a rreb1 other upstream 77090 27515960 ~ 27625569 (-)
G223640 NA other upstream 201694 27640564 ~ 27685979 (-)
LOC120552596 NA other upstream 255470 27694340 ~ 27700381 (-)
G223645 NA other upstream 299912 27738782 ~ 27739972 (-)
G223665 fars2 other upstream 311835 27750705 ~ 27754334 (-)

Expression


Co-expression Network