G223626


Basic Information

Item Value
gene id G223626
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27632695 ~ 27719691 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302701
TCAGACACATTTTGAACAAATCAAAGCTTTTAAAACAAACAGTGAGAAGCCATTAATGTAGTTCCATGACAGAAGGACATCTGGAGATTAGTTATGAAACTCCATAAATGTTCCTTTAGGACACAATCAGTGTCTGATGTTGACAAATAAAAGGTCTGTTAGCTGCTGAATGCAGATTTAAAAACTCATTCACAAACATAGAAAACAGACACAACAAATTATACATCCTCTGCACTTGTACACGATTTTCAAAAAGATTTCACTCAACAATCTAAAATGTCATCAGCGTACATGACTTCATTGACAAAATGCCACGCGATTGGTTGGTTTAAAAACGGCAGGAAATGCATCTCGGGTATCCTATCGCGAGAGTCCGTGATCCCTTAAGAAGATGTTTTTAATCCACTGGTCAGATCAGCTGTTGGTCCGCTGTAGTTGATGATGTCAcagctgggtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatgtgtgtgtgagatgatgTCAcagctgggtgtgtgtgtatgttgttctcaaagctgtgtgtctgtgtgtgtgatgatgtcacagctgtgtgtgtgtttgttgttctcaaagctgtgtctgtgtgtgtgtgagatgatgtcacagctgtgtgtgtgtgtgtatgtgtgtgagatgatgtcacagctgtgtttgtgtgtgtgacgtcaaagctgtgtgtgtgtgtgtgtgtgtgtgtgagatgatgtcacagctgtgttgtgtgtgtgtgtgtatgtatgtgtgtgtgtgagatgatgtcacagctgtgtgtgtgtgtgatgtcaaagctgtgtgtgtgtgtgtgtgtgtgcgcgcacatgcgcatgtgtggttgtgtgtgtgtgtgtgtgtgtg
>TU302702
TCAGACACATTTTGAACAAATCAAAGCTTTTAAAACAAACAGTGAGAAGCCATTAATGTAGTTCCATGACAGAAGGACATCTGGAGATTAGTTATGAAACTCCATAAATGTTCCTTTAGGACACAATCAGTGTCTGATGTTGACAAATAAAAGGTCTGTTAGCTGCTGAATGCAGATTTAAAAACTCATTCACAAACATAGAAAACAGACACAACAAATTATACATCCTCTGCACTTGTACACGATTTTCAAAAAGATTTCACTCAACAATCTAAAATGTCATCAGCGTACATGACTTCATTGACAAAATGCCACGCGATTGGTTGGTTTAAAAACGGCAGGAAATGCATCTCGGGTATCCTATCGCGAGAGTCCGTGATCCCTTAAGAAGATGTTTTTAATCCACTGGTCAGATCAGCTGTTGGTCCGCTGTAGTTGATGATGTCAcagctgggtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatgtgtgtgtgagatgatgTCAcagctgggtgtgtgtgtatgttgttctcaaagctgtgtgtctgtgtgtgtgatgatgtcacagctgtgtgtgtgtttgttgttctcaaagctgtgtctgtgtgtgtgtgagatgatgtcacagctgtgtgtgtgtgtgtatgtgtgtgagatgatgtcacagctgtgtttgtgtgtgtgacgtcaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgag
>TU302704
TCAGACACATTTTGAACAAATCAAAGCTTTTAAAACAAACAGTGAGAAGCCATTAATGTAGTTCCATGACAGAAGGACATCTGGAGATTAGTTATGAAACTCCATAAATGTTCCTTTAGGACACAATCAGTGTCTGATGTTGACAAATAAAAGGTCTGTTAGCTGCTGAATGCAGATTTAAAAACTCATTCACAAACATAGAAAACAGACACAACAAATTATACATCCTCTGCACTTGTACACGATTTTCAAAAAGATTTCACTCAACAATCTAAAATGTCATCAGCGTACATGACTTCATTGACAAAATGCCACGCGATTGGTTGGTTTAAAAACGGCAGGAAATGCATCTCGGGTATCCTATCGCGAGAGTCCGTGATCCCTTAAGAAGATGTTTTTAATCCACTGGTCAGATCAGCTGTTGGTCCGCTGTAGTTGATGATGTCAcagctgggtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatgtgtgtgtgagatgatgTCAcagctgggtgtgtgtgtatgttgttctcaaagctgtgtgtctgtgtgtgtgatgatgtcacagctgtgtgtgtgtttgttgttctcaaagctgtgtctgtgtgtgtgtgagatgatgtcacagctgtgtgtgtgtgtgtgtgtgtgagatgatgtcacagctgtgttgtgtgtgtgacgtcaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggggtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko04216 Ferroptosis
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU302701 True 882 lncRNA 0.43 3 27714926 27719691
TU302702 False 745 lncRNA 0.41 2 27673689 27719691
TU302704 False 787 lncRNA 0.42 4 27632695 27719691

Neighbor

gene id symbol gene type direction distance location
LOC120552593 NA coding downstream 320330 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 407703 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 427542 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 443151 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 503301 27046827 ~ 27129394 (-)
LOC120552567 NA coding upstream 583643 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 657388 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 1210540 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 1405523 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 1431743 29151434 ~ 29161971 (-)
G223633 NA non-coding downstream 28807 27603523 ~ 27603888 (-)
G223609 NA non-coding downstream 40230 27532743 ~ 27592465 (-)
G223607 NA non-coding downstream 47181 27561736 ~ 27585514 (-)
G223608 NA non-coding downstream 47930 27528400 ~ 27584765 (-)
G223617 NA non-coding downstream 58081 27574313 ~ 27574614 (-)
G223664 NA non-coding upstream 54250 27773941 ~ 27865723 (-)
G223651 NA non-coding upstream 75122 27794813 ~ 27841026 (-)
G223671 NA non-coding upstream 93606 27813297 ~ 27861633 (-)
G223679 NA non-coding upstream 133985 27853676 ~ 27854435 (-)
G223682 NA non-coding upstream 187125 27906816 ~ 27907373 (-)
rreb1a rreb1 other downstream 7126 27515960 ~ 27625569 (-)
G223538 NA other downstream 149534 27157973 ~ 27483161 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other downstream 444477 27104598 ~ 27188218 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 726363 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 1122568 26483929 ~ 26510127 (-)
G223645 NA other upstream 19091 27738782 ~ 27739972 (-)
G223665 fars2 other upstream 31014 27750705 ~ 27754334 (-)
G223646 fars2,LOC102791206 other upstream 36655 27756346 ~ 27795851 (-)
G223681 NA other upstream 177443 27897134 ~ 27915833 (-)
G223686 LOC100697526 other upstream 291337 28011028 ~ 28517926 (-)

Expression


Co-expression Network