G223640


Basic Information

Item Value
gene id G223640
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27640564 ~ 27685979 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302720
ACTGATTTTCAAACATtagtcattttatttattactctTTATCATTTTAGCaatcttttattttgttatatctCAGTAGGCCTATAATCTGTAAAGTATCAATCTTCTGGGATAGACTATCTATAAtagagcttttttttattttctcaaaatcCTTTGATATACATATTCTCTTGTtagatgatttctttttttttagaataagtccattttttttaaactctttttgttaCTCGACATCCCCATTAATAAAGAAACTAaccaacaaacagacaaacaaacataagTACACATCTTTTTGTCAGAAGGCAGCGGAAACGTCATCTGTGCCTCGGCAACGAAATAAACAACGTCCTCGGATTTATTTACCGTGTTTATGTAGTTAATGATGCTACCGTACTGTTGGGACTCAGCTTTTTTAATCTAACTTACAGACCTAAAATATATCcgacacattctcactcccatctcgtaaaatacggacgcttggtcaggtgcctttgacgctaaaagtctccatTAGCGTCAGATCTAAACGCCCTGGGCTGGGACTATTAGCGTCACTTTGGACTATATGGGTCAGAACGTACGTTTAACAGACATggcacaagaatgggacagtaaagtttaggaaaagatcaagggtgggcttataaaaggtatATTTTCAGTGACACCCGCGAATGGGACAGtttggtttaggtaaagaataacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtgaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagatgaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagaagaacggaca
>TU302721
ACTGATTTTCAAACATtagtcattttatttattactctTTATCATTTTAGCaatcttttattttgttatatctCAGTAGGCCTATAATCTGTAAAGTATCAATCTTCTGGGATAGACTATCTATAAtagagcttttttttattttctcaaaatcCTTTGATATACATATTCTCTTGTtagatgatttctttttttttagaataagtccattttttttaaactctttttgttaCTCGACATCCCCATTAATAAAGAAACTAaccaacaaacagacaaacaaacataagTACACATCTTTTTGTCAGAAGGCAGCGGAAACGTCATCTGTGCCTCGGCAACGAAATAAACAACGTCCTCGGATTTATTTACCGTGTTTATGTAGTTAATGATGCTACCGTACTGTTGGGACTCAGCTTTTTTAATCTAACTTACAGACCTAAAATATATCcgacacattctcactcccatctcgtaaaatacggacgcttggtcaggtgcctttgacgctaaaagtctccatTAGCGTCAGATCTAAACGCCCTGGGCTGGGACTATTAGCGTCACTTTGGACTATATGGGTCAGAACGTACGTTTAACAGACATggcacaagaatgggacagtaaagtttaggaaaagatcaagggtgggcttataaaaggtatATTTTCAGTGACACCCGCGAATGGGACAGtttggtttaggtaaagaataacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagatgaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtgaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagatgaagaagaacgggacagttgggtttaggtgaagaagaacgggacagttgggtttaggtgaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggttttagataaagaagaacgggacagttgggtttagatgaagaagaacgggacagttgggtttaggtaaagaagaaagaagaattTTGGGCTTTCatgctactctctactgctgtctctctacatactactctctactgttgtctctctacatactactctctactgctgtctctctacatactactctctactgttgtctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctacatactactctctactgctgtctctctacatactactctctactgttgtctctacatactactctctacgttgtctctctacatactactctctactgttgtctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgctgtctctctacatactactctctactgctgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctcttaatactactctctactgttgtctctctacatactactctctactgtctctctacatactactctctactgttgtctctctacatcctactctctactgttgtttctctacatactactc
>TU302729
ACTGATTTTCAAACATtagtcattttatttattactctTTATCATTTTAGCaatcttttattttgttatatctCAGTAGGCCTATAATCTGTAAAGTATCAATCTTCTGGGATAGACTATCTATAAtagagcttttttttattttctcaaaatcCTTTGATATACATATTCTCTTGTtagatgatttctttttttttagaataagtccattttttttaaactctttttgttaCTCGACATCCCCATTAATAAAGAAACTAaccaacaaacagacaaacaaacataagTACACATCTTTTTGTCAGAAGGCAGCGGAAACGTCATCTGTGCCTCGGCAACGAAATAAACAACGTCCTCGGATTTATTTACCGTGTTTATGTAGTTAATGATGCTACCGTACTGTTGGGACTCAGCTTTTTTAATCTAACTTACAGACCTAAAATATATCcgacacattctcactcccatctcgtaaaatacggacgcttggtcaggtgcctttgacgctaaaagtctccatTAGCGTCAGATCTAAACGCCCTGGGCTGGGACTATTAGCGTCACTTTGGACTATATGGGTCAGAACGTACGTTTAACAGACATggcacaagaatgggacagtaaagtttaggaaaagatcaagggtgggcttataaaaggtatATTTTCAGTGACACCCGCGAATGGGACAGtttggtttaggtaaagaataacgggacagttgggtttaggtgaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagatgaagaagaacgggacagttgggtttaggtgaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagatgaagaagaacgggacagttgggtttaggtaaagaagaaagaagaattTTGGGCTTTCatgctactctctactgctgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgctgtctctctacatactactctctactgctgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctcttaatactacgtcatcttacagcgccgcgtaGCTGCTGCTCCGCCCGGTGTGTCCCATACAGaagctaaagggtgatttttgcgtcagtatctgacgctgagagactctgaccaagcgtccgtattttacgagttaggaatgagaacgggttgataaATCGCCTCTAAGGTCGTCTAGAATGGCGAATGAAAAGGGGGTTAATGTGCTAAATGGCAACAGTCATATCTGTCTTCAGCCacggttagatttttttttatttttattttttatagctaCACTGGCCGTGGAGTCACATCTTCGTATTGCTGTCAGCGTTTAAAAATATCTTCTCTCAGTAACAGATTCATTCATTTCTAACACATGGTTCTGCTGAGCGAAGGAACGGTGGGAAATACATCACCAACATGAACTAAAGTTAATTCTAACGTGTTTCTACTTTTCCAAAATAATCcttgattattataattatttcagACGGATGTTTCTACGGTTTACACTCAGGACTTTTCTCGTTAGATTTCAGGAAATAAGCACAACCTAAAGCTAGaaaggcgggctttacacgatggcGATAGCGCAGCTACGGCGAGCAgaatttttgtttacattcgacgtgacggctaccgaagcgcagcaatcggttgatgccgctgtcgctgctatgtcacccagatcgttgctctgattggttgaaggactatccaattgcgcccagaggcatttgagcagcGTCTGTTGATgacctttggaaatgggctgtgaatgaaccttagcacaaattaaaaaaataaaaggtagcctggttgacaccagagaCAAGGCtacctttttctttaaatttgtGCTAATTTCCTGAAATGTTTCGAGAGTGTCTGAACTTAAATCAtgcaaattaacattttaattaacaactgTTCTCTAATGAAAAGCaggcttttttttaactctgaAGTACTTCCCTGCAGAGTTTTGGCGGGGGAAAAAACAAGGCTACGGTCACACCAAAAACCAGCATAGCGAGATTTCTTAACGTGGCTTTGATTGTTATAAATTGAAGCTAGCGGGTGGGCGGCAAGCTAGCCAGTTCAACAACCAAAAGTTAAATACTATAAATTTCAAAACACGCCTTACTGCCGGCACACGATTGACTGGAAGCCATGTCGCGTGGGTCAAATGTCAGAACTAGTAGTCAGTGCTACAAATTTACCTGTAAAAGTCCACCAACGTATTAAAACCTGGCGCTAAATGCCGCTGTGATAAAAGCTGGTGTGACCATGGCCTGAGCACAATAAACAGCCAATAAGAATACAAATATTACAGCACCATCAAGCATTCAGTCCATCAAACCTACCGGGCTCAACACATTCAACTTTGgcgcgatttaaaaaaaaaagaaaagggagaaaacTGTCTGTGATGGAAATGAGGCGACTGGTCTGAAATGAGCACTAGGCCTCGGCTTGTCTTTATAGCTGCATCTCATGTCGCTAATTTGACAGCTCCTCGACTCATCGGTCCTcaggctgaaccggaagttgtgcTGCGTTCAAGGCAACTCCCAGTTACAGTGTTTGACgtcacacataaacaacaatggcgccccctgttgatgctgtacagacggcCGGTGATTAACgttgagaaatagaaataaatagacatgaacaggcaacgtaaagtaattccgcacattgtaataaAAGCGATACgcatacgattgtgtactactacaggttatgtttattaaatgaagcccaaaatatgttgcAGACTAGAAATCGCcagtatcagctagcgctagctaacgtcaacattaggtagccgctagctaacgttagctagaagGGTtggtcgtaacttacgggctaaaaattgtgtctggaaatAAGAGTGCGGTTCGGCcctgcatttttctgtccgagagTATTCggaaaatgtcaacagatgagctcatcagcgcacacggggcaacaagcgtacgttaacacaggcgcgcacctacataataagccgttttaaattaaaaacgttcaatgccttatcgcgctgatgtgaccgagcccgacccgaaacCCCCAACATAATTTCTAAATCTCTATCCGAACCTGGCCCggttccacctattgttatacTGAactatgattattattatgtatcttATATGGTATTACATTTGtattcattaatattaatattaataataataataatataatttttattcttatttttaatCCCTATTTTgctctttgttttttaatgtttgatgttgtgtgtaaagcactttgagttgccttgtgctgaaatgtgctgtataaataagattgccttgccttgcctcgGTGAAGGCCacctcaaagctcttatttctgctcGCGaaggagcgagcatcgaggagctataggcAAGGAAACaggagagcagccttcctgggaGCCGTGCAGccactaaaaacacatttgctcgttgcctctctcctcgcATGATTTCCTCGCGCCTCTCCCTCCTTTCTGACCAGACCACTTGAAATGTATCCCAACATTagccacttttaaaaaaaaaaaaataccaaattgTGGCTAATTCGGGAACAATCTctcatatttagtttttacactGTGCTCTCATTGTATACTTTCcttccattttcatttcatttctttttattgcatctttattgtatttttaataataataataataatgtaaatctgtattttttatttgtgacCAAAAGCCCTACTAGTGTTGAGAATTAGCTTCGGCTAAAAACACTACGATACATACATCAGATGACTGTTGAAGtttatctatgtttttttttttgtatctgtccctatctaAATAAACCTTAAAGAATCGTGTGCCTTCTCGGTGGGAGGGAATAAGACGCGAGGAGTCAAGGGAAGTCAAGGGAGTGCAACTTAAGGAACATGAGATGCAGCTATTGATTTTGTGGCGTTAAGCTTCGGCCTCACGTTACACATGAGTGTGTACCTCAGGCTATATGGGAACCCTAATGTAGCGCCTGATATTGAATGTGTACCTCAGGCTATATGGGAACCCTAATGTAGCGCCTGATATTGAGTGTGTACCTCAGGCTATATGGGAACCCTAATGTAGCGCCTGATATTGAATGTGTACCTCAGGCTATATGGGAACCCTAATGTAGCGCCTGATATTGTGTCAGCACCAGGCAGCCACAGAGCGCTGTCTAGGCCTAGCCTACTAAACATCAATAATTCATGGTTGACTTTAACACTGTGTAATTCCACGATTGTAAGCAGGGCGAGGATCCATCAAATtttcatcattgtcatcattTCCAGCTCGACGGCGCGTTGAATATTTCATGTTATCGACCTCCGAGGTCAGGTCAGCGTGTGATTGGATGAGCGCTCCGGGAGGACGGGCCTGCAGATGTCCCAGGAAAGGCAAACCAGGCCGCCATATACGGAGATGTAGTAAAAATCCATTTTTGGGTGTGTATAGTTTTTTTCTGCAGATGAATTCAAAactcagttgttgttgttgttggtttttttttaatttttttcagtttcgAAGAGTAGCTAtcactctgttttctgttttcttttttcatttgtggTTTTCTTTTGATTTTCTTCGTTGGGTTTTTCTGTTGTTGTCGTCGTCGTTACGTTtctccttttgttttgtttttttgttaaaacgCCAGCCAAGTCAGTACGGTTGGCAGCGTGGTCAGGACCAAGGCGAGCCCCCTGGCGTCGGCCGATCTGGGCGCCGCGTTTCCGCCGCCACAGAGTTCAAACAAACTCCCACGGAAATCCAGGTTGCGGGATTCCTTTTTCAGTTTCTCCCAGAGGTCCGTGGCGCCCTCCTGGCAGTCGGCCAGCGCCGTCGTGGCACAGGAGTGGAAGTTATCCCAG
>TU302736
ctgctgtctctctacaaactactctctactgttgtctctctacatactactctctactgctgtctctctacatactacactctactgttgtctctctacatactactctctactgctgtctctctacatactactctctactgctgtctctacatactactctctactgttgtctctctacatactactctctactgctgtctctctacatactactctctactgctgtctctctacatactactctctactgctgtctctacatactac
>TU302738
ACTGATTTTCAAACATtagtcattttatttattactctTTATCATTTTAGCaatcttttattttgttatatctCAGTAGGCCTATAATCTGTAAAGTATCAATCTTCTGGGATAGACTATCTATAAtagagcttttttttattttctcaaaatcCTTTGATATACATATTCTCTTGTtagatgatttctttttttttagaataagtccattttttttaaactctttttgttaCTCGACATCCCCATTAATAAAGAAACTAaccaacaaacagacaaacaaacataagTACACATCTTTTTGTCAGAAGGCAGCGGAAACGTCATCTGTGCCTCGGCAACGAAATAAACAACGTCCTCGGATTTATTTACCGTGTTTATGTAGTTAATGATGCTACCGTACTGTTGGGACTCAGCTTTTTTAATCTAACTTACAGACCTAAAATATATCcgacacattctcactcccatctcgtaaaatacggacgcttggtcaggtgcctttgacgctaaaagtctccatTAGCGTCAGATCTAAACGCCCTGGGCTGGGACTATTAGCGTCACTTTGGACTATATGGGTCAGAACGTACGTTTAACAGACATggcacaagaatgggacagtaaagtttaggaaaagatcaagggtgggcttataaaaggtatATTTTCAGTGACACCCGCGAATGGGACAGtttggtttaggtaaagaataacgggacagttgggtttaggtgaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagaagaacggaca
>TU302740
ACTGATTTTCAAACATtagtcattttatttattactctTTATCATTTTAGCaatcttttattttgttatatctCAGTAGGCCTATAATCTGTAAAGTATCAATCTTCTGGGATAGACTATCTATAAtagagcttttttttattttctcaaaatcCTTTGATATACATATTCTCTTGTtagatgatttctttttttttagaataagtccattttttttaaactctttttgttaCTCGACATCCCCATTAATAAAGAAACTAaccaacaaacagacaaacaaacataagTACACATCTTTTTGTCAGAAGGCAGCGGAAACGTCATCTGTGCCTCGGCAACGAAATAAACAACGTCCTCGGATTTATTTACCGTGTTTATGTAGTTAATGATGCTACCGTACTGTTGGGACTCAGCTTTTTTAATCTAACTTACAGACCTAAAATATATCcgacacattctcactcccatctcgtaaaatacggacgcttggtcaggtgcctttgacgctaaaagtctccatTAGCGTCAGATCTAAACGCCCTGGGCTGGGACTATTAGCGTCACTTTGGACTATATGGGTCAGAACGTACGTTTAACAGACATggcacaagaatgggacagtaaagtttaggaaaagatcaagggtgggcttataaaaggtatATTTTCAGTGACACCCGCGAATGGGACAGtttggtttaggtaaagaataacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302720 False 980 lncRNA 0.38 3 27684390 27685979
TU302721 False 1926 TUCP 0.40 5 27640564 27685979
TU302729 True 5100 TUCP 0.42 6 27679415 27685979
TU302736 False 270 lncRNA 0.42 2 27645074 27645453
TU302738 False 835 lncRNA 0.37 3 27684390 27685979
TU302740 False 774 lncRNA 0.36 2 27684627 27685979

Neighbor

gene id symbol gene type direction distance location
LOC120552593 NA coding downstream 328199 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 415572 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 435411 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 451020 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 511170 27046827 ~ 27129394 (-)
LOC120552567 NA coding upstream 617355 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 691100 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 1244252 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 1439235 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 1465455 29151434 ~ 29161971 (-)
G223633 NA non-coding downstream 36676 27603523 ~ 27603888 (-)
G223609 NA non-coding downstream 48099 27532743 ~ 27592465 (-)
G223607 NA non-coding downstream 55050 27561736 ~ 27585514 (-)
G223608 NA non-coding downstream 55799 27528400 ~ 27584765 (-)
G223617 NA non-coding downstream 65950 27574313 ~ 27574614 (-)
G223648 NA non-coding upstream 16634 27702613 ~ 27802788 (-)
G223664 NA non-coding upstream 87962 27773941 ~ 27865723 (-)
G223651 NA non-coding upstream 108834 27794813 ~ 27841026 (-)
G223671 NA non-coding upstream 127318 27813297 ~ 27861633 (-)
G223679 NA non-coding upstream 167697 27853676 ~ 27854435 (-)
rreb1a rreb1 other downstream 14995 27515960 ~ 27625569 (-)
G223538 NA other downstream 157403 27157973 ~ 27483161 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other downstream 452346 27104598 ~ 27188218 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 734232 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 1130437 26483929 ~ 26510127 (-)
LOC120552596 NA other upstream 8361 27694340 ~ 27700381 (-)
G223645 NA other upstream 52803 27738782 ~ 27739972 (-)
G223665 fars2 other upstream 64726 27750705 ~ 27754334 (-)
G223646 fars2,LOC102791206 other upstream 70367 27756346 ~ 27795851 (-)
G223681 NA other upstream 211155 27897134 ~ 27915833 (-)

Expression


Co-expression Network