Gene
RNA
| Item | Value |
|---|---|
| gene id | G223665 |
| gene name | fars2 |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053133.1 |
| NCBI id | CM020930.1 |
| chromosome length | 31697812 |
| location | 27750705 ~ 27754334 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| fars2 | Predicted to enable phenylalanine-tRNA ligase activity. Predicted to be involved in phenylalanyl-tRNA aminoacylation. Predicted to act upstream of or within tRNA aminoacylation and translation. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 14 and hereditary spastic paraplegia 77. Orthologous to human FARS2 (phenylalanyl-tRNA synthetase 2, mitochondrial). |
| description |
|---|
| PREDICTED: phenylalanine--tRNA ligase, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU302775 | True | 479 | TUCP | 0.61 | 4 | 27750705 | 27754334 |
| TU302776 | False | 458 | TUCP | 0.62 | 3 | 27750705 | 27753356 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120552593 | NA | coding | downstream | 438340 | 27310012 ~ 27312365 (-) |
| LOC120552591 | NA | coding | downstream | 525713 | 27223754 ~ 27224992 (-) |
| LOC120552579 | NA | coding | downstream | 545552 | 27195330 ~ 27205153 (-) |
| LOC120552735 | nebl | coding | downstream | 561161 | 27136771 ~ 27189544 (-) |
| LOC120552734 | nebl | coding | downstream | 621311 | 27046827 ~ 27129394 (-) |
| LOC120552567 | NA | coding | upstream | 549000 | 28303334 ~ 28355647 (-) |
| LOC120552600 | NA | coding | upstream | 622745 | 28377079 ~ 29112293 (-) |
| dnah5l | LOC103377303,LOC103367559 | coding | upstream | 1175897 | 28930231 ~ 29094205 (-) |
| LOC120552571 | NA | coding | upstream | 1370880 | 29125214 ~ 29147661 (-) |
| LOC120552587 | hus1 | coding | upstream | 1397100 | 29151434 ~ 29161971 (-) |
| G223643 | NA | non-coding | downstream | 12143 | 27673565 ~ 27738562 (-) |
| G223626 | NA | non-coding | downstream | 31014 | 27632695 ~ 27719691 (-) |
| G223627 | NA | non-coding | downstream | 95297 | 27598141 ~ 27655408 (-) |
| G223633 | NA | non-coding | downstream | 146817 | 27603523 ~ 27603888 (-) |
| G223617 | NA | non-coding | downstream | 176091 | 27574313 ~ 27574614 (-) |
| G223664 | NA | non-coding | upstream | 19607 | 27773941 ~ 27865723 (-) |
| G223651 | NA | non-coding | upstream | 40479 | 27794813 ~ 27841026 (-) |
| G223671 | NA | non-coding | upstream | 58963 | 27813297 ~ 27861633 (-) |
| G223679 | NA | non-coding | upstream | 99342 | 27853676 ~ 27854435 (-) |
| G223682 | NA | non-coding | upstream | 152482 | 27906816 ~ 27907373 (-) |
| G223645 | NA | other | downstream | 10733 | 27738782 ~ 27739972 (-) |
| LOC120552596 | NA | other | downstream | 50324 | 27694340 ~ 27700381 (-) |
| G223640 | NA | other | downstream | 64726 | 27640564 ~ 27685979 (-) |
| rreb1a | rreb1 | other | downstream | 125136 | 27515960 ~ 27625569 (-) |
| G223538 | NA | other | downstream | 267544 | 27157973 ~ 27483161 (-) |
| G223646 | fars2,LOC102791206 | other | upstream | 2012 | 27756346 ~ 27795851 (-) |
| G223681 | NA | other | upstream | 142800 | 27897134 ~ 27915833 (-) |
| G223686 | LOC100697526 | other | upstream | 256694 | 28011028 ~ 28517926 (-) |
| G223746 | NA | other | upstream | 422031 | 28176365 ~ 28195425 (-) |
| LOC120552566 | NA | other | upstream | 1027556 | 28781890 ~ 28846253 (-) |
