G223686 (LOC100697526)


Basic Information

Item Value
gene id G223686
gene name LOC100697526
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28011028 ~ 28517926 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302818
CTGCATTGGAGAGTCCaaactgtagactggagactctgagATTGGTGCGCTGTggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACAGAGAACTACAACCTGAatgattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGGAGAGCTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGGCGGCAACAACAACCTggaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagattgTGGAGCTGCggtttgtcagagatcagctgtgctgctctggtctcagctctgaagtccaacccctcccatctgaaagagctggacctgaggGGCAACAACCTGAAGGAGTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAgactgtagactggagactctggAATGGAGGAGGTAACAGAGAGAtcaggaggaggatgttggagGACCAGCTGAGTCCTGATGATCCCGAGAgcttgaagcagcagcagcacctctAACTGGGCCATGTTACTGGGAGGTAGAGTGGAGAGACTGACTGAGGCTCTGCACGCTTCCACATTAGCAACGACGCGGGCCATGAAAAGAAGGATGTCGGGCGAGTTGATTGGCCGACATTAGCCTCTGGGTCAGTGGGGGGGCTCTGTCTCCATCAGAATCAGCTGACTCAGCATACGTCAGACTACAGAGTGGAGCCAAGTGTGGAAAGCATATGTTTgctaacatttcacattttaccATCAATGGTAAACTTGACTGTCGTCGCTGCAGGACAGTCAGCTGTTAGTCTGATAAACTTAACTGCCCCCGCTGAAACAACCGTTACCTCACAGAGACCTTTACCCCCCACAGTAACATCTTCTCTTCTAAATTAACCGTTCACATTTAAACTAACGTTAATAGGTGAGGTGATTACCACGCTGTCCACAGCAACGGAAGAGAttagcttcacacacacacacacacacactctctctctctctcttaggcgttttcacacctaaaAGTCTgaaggtccggaccaaggttcatgtttttgttacattgtaacatttgatccggtaagttttggtttcacactgctgtTATGCAAGTGTACAAAAGATCTCTACGTGACAAACCTACGTCCTGc
>TU302824
CTGCATTGGAGAGTCCaaactgtagactggagactctgagATTGGTGCGCTGTggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACAGAGAACTACAACCTggaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagattgTGGAGCTGCggtttgtcagagatcagctgtgctgctctggtctcagctctgaagtccaacccctcccatctgaaagagctggacctgaggGGCAACAACCTGAAGGAGTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAgactgtagactggagactctggAATGGAGGTTGTAACAGAGTG
>TU302830
CTGCATTGGAGAGTCCaaactgtagactggagactctgagATTGGTGCGCTGTggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACctgaggGGCAACAACAACCTGAAGGAGTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAgactgtagactggagactctgaggTCAGTAGAGGGTTGGATTCAGTCCATGCTGGTTTCAGCAGTATCAAACTAAACCCAGTTAGTATCAAAGCAAAGATCCAGTATTTTCTGTAAACCTCCAACCTCGTCAGTG
>TU302831
GTggtttgtcagagatcagctgtgctcCTCTTgcctcagctctgaagtccaacccctcccatctgaaagAGCTGAATCTGAGAGACAACGAGAACctgaaggattcaggagtgaagctgctgtgtGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGGAGAGCTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACAGACAACTACAACctgaaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGTGGAACTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGGGTAACAACAAGAACCTGGAGcattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactgTGAGattgGAGTACTGCagtttgtcagagatcagctgtgcttctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACTAGAAACTACAAAAtgaaggattcaggagtgaagcagctGTG
>TU302832
CTGCATTGGAGAGTCCaaactgtagactggagactctgagATTGGTGCGCTGTggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACAGACAACGAGAACctgaaggattcaggagtgaagctgctgtgtGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGGAGAGCTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACTAGAAACTACGACctgaaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagattgAGGTGGTGCggtttgtcagagatcagctgtgcttctctggcctcagctctgaagaccaacccctcccatctgagagagctggacctggaCTTGAACAGCCTGAAGGAGTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAgactgtagactggagactctgagATGGAGGAGGTAACAGAGAGAtcaggaggaggatgttggagGACCAGCTGAGTCCTGATGATCCCGAGAgcttgaagcagcagcagcacctctAACTGGGCCATGTTACTGGGAGGTAGAGTGGAGAGACTGACTGAGGCTCTGCACGCTTCCACATTAGCAACGACGCGGGCCATGAAAAGAAGGATGTCGGGCGAGTTGATTGGCCGACATTAGCCTCTGGGTCAGTGGGGGGGCTCTGTCTCCATCAGAATCAGCTGACTCAGCATACGTCAGACTACAGAGTGGAGCCAAGTGTGGAAAGCATATGTTTgctaacatttcacattttaccATCAATGGTAAACTTGACTGTCGTCGCTGCAGGACAGTCAGCTGTTAGTCTGATAAACTTAACTGCCCCCGCTGAAACAACCGTTACCTCACAGAGACCTTTACCCCCCACAGTAACATCTTCTCTTCTAAATTAACCGTTCACATTTAAACTAACGTTAATAGGTGAGGTGATTACCACGCTGTCCACAGCAACGGAAGAGAttagcttcacacacacacacacacacactctctctctctctcttaggcgttttcacacctaaaAGTCTgaaggtccggaccaaggttcatgtttttgttacattgtaacatttgatccggtaagttttggtttcacactgctgtTATGCAAGTGTACAAAAGATCTCTACGTGACAAACCTACGTCCTGc
>TU302839
GTggtttgtcagagatcagctgtgctcCTCTTgcctcagctctgaagtccaacccctcccatctgaaagAGCTGAATCTGAGAGACAACGAGAACctgaaggattcaggagtgaagctgctgtgtGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGGAGAGCTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACTAGAAACTACGACctgaaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagattgTGGAGTTGCggtttgtcagagatcagctgtgctgctctggtctcagctctgaagtccaacccctcccatctgatgCAGCTGTACCTGGGTAACAACAAGGAGctgaaggattcaggagtgaagctgctgtgtggtttTCTGGAAAGACCAAACTGTGGACTGGTGACTCTGAGttTGAGATACTGCGGTTTGTCAAAGATCAGCTGTGCTgctctggtctcagctctgaagtccaacccctcccatctgaaagagctggacctgagcttcAACTACAACctgaaggattcaggagtgaagcatCTGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGTGGAACTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGGGTAACAACAAGAACCTGGAGcattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactgTGAGattgGAGTACTGCagtttgtcagagatcagctgtgcttctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACTAGAAACTACAAAAtgaaggattcaggagtgaagcagctGTG
>TU302842
CAGGCTAGCAGCaccaagctagcagcaccagggCGCAGCACCAGGCTAGTAGCACCAGGTCAGCACCAGGCTAGCAGCaccaagctagcagcaccaagctagcagcaccaggctagcagcaccaggctagcagcaccaggctagcagcaccaggctagcagcaccaggctagcagcaccaggctagcagcaccaggctagcagcaccaggctaGCCCATGGCAGAGGGAGCAGCAACGTCAACTCAGTGCTGCCAGCCTCGGGTcacacttttcctgctacacgTTCTGGAGATGAGGATTTATTTTAGTGTTATGACTGCAACACAAGattgTGGAGCTGCggtttgtcagagatcagctgtgctgctctggtctcagctctgaagtccaacccctcccatctgaaagagctggacctgaggGGCAACAACctgaaggattcaggagtgaagctgctgtgtGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGGAGAGCTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACTAGAAACTACGACctgaaggattcaggagtgaagcagctGTGTGCTGGATTGAAGAGTCCaaactgtagactggagactctgagATTGAAGATCTGCGAtttgtcagagatcagctgtgctcctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACAGACAACTACAACctgaaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgaggTCAGTTCATCTATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302818 False 1294 lncRNA 0.50 6 28246813 28517926
TU302824 False 411 lncRNA 0.53 5 28011028 28517926
TU302830 False 329 lncRNA 0.50 4 28021585 28517926
TU302831 False 655 lncRNA 0.51 5 28207446 28332192
TU302832 True 1295 lncRNA 0.50 8 28246813 28517926
TU302839 False 1009 TUCP 0.51 8 28207446 28332192
TU302842 False 873 lncRNA 0.54 6 28218099 28409054

Neighbor

gene id symbol gene type direction distance location
LOC120552593 NA coding downstream 698663 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 786036 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 805875 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 821484 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 881634 27046827 ~ 27129394 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 412305 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 607288 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 633508 29151434 ~ 29161971 (-)
dnph1 NA coding upstream 1085176 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 1111379 29629305 ~ 29672772 (-)
G223726 NA non-coding downstream 217 28009994 ~ 28010811 (-)
G223718 NA non-coding downstream 57375 27948615 ~ 27953653 (-)
G223682 NA non-coding downstream 103655 27906816 ~ 27907373 (-)
G223664 NA non-coding downstream 145305 27773941 ~ 27865723 (-)
G223671 NA non-coding downstream 149395 27813297 ~ 27861633 (-)
G223770 NA non-coding upstream 67873 28585799 ~ 28621566 (-)
G223696 NA non-coding upstream 128138 28646064 ~ 28711709 (-)
LOC120552606 NA non-coding upstream 134029 28651955 ~ 28652924 (-)
G223778 NA non-coding upstream 140983 28658909 ~ 28694469 (-)
G223694 NA non-coding upstream 149148 28667074 ~ 28761210 (-)
G223681 NA other downstream 95195 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 215177 27756346 ~ 27795851 (-)
G223665 fars2 other downstream 256694 27750705 ~ 27754334 (-)
G223645 NA other downstream 271056 27738782 ~ 27739972 (-)
LOC120552596 NA other downstream 310647 27694340 ~ 27700381 (-)
LOC120552566 NA other upstream 263964 28781890 ~ 28846253 (-)
LOC120552583 NA other upstream 782764 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 961883 29479809 ~ 29543351 (-)
G223911 NA other upstream 1032469 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 1094066 29611992 ~ 29620659 (-)

Expression


Co-expression Network