G223688


Basic Information

Item Value
gene id G223688
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28106828 ~ 28166948 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302849
GCTTCTGAGTTCTGACATCAACCTTCAAGTTCCAGAATCTGATCAACTTTAACAGCAGTTCATCATTCAACAGCGTGGAGACCAACCCAAAGAGATCCAGAGATAGGCCCACTTAACAGGAAGAGAAGCTGAGGGCAGTTTAAATGACTGGACATCTACAGTTCTGCTGTCCTAATCTGCTGAGTCACTCTGGCTCCACAAGATCTCAATCAATCATGTCCAGCTGGAGGAGCCCAGTGGTCAACGGGACAAAAAGATATCTAAATAATACACATCACTGGCCTGGGaaatataaaacactttttcaTAAGATTGTATTAATGGTAAATACACAATGATTTGTCCAAACAACAAActgatttattaatttgaAAGGTCTCTGTGAGGTAACGGTTGTTTCAGCGGGGGGGCAGTTAAGTTTATCAGACTAACAGCTGACTGTCCTGCAGCGACGACAGTCAAGTTTACCATTGATggtaaaatgtgaaatgttagcAAACATATGCTTTCCACACTTGGCTCCACTCTGTAGTCTGACGTATGCTGAGTCAGCTGATTCTGATGGAGACAGAGCCCCCCCCACTGACCCAGAGAGGATAATGTCGGCCAATCAACTCGCCCGACATCCTTCTTTCATGGCCACGTGCCGTTGCTAATGTGGAAGCGTGCAGAGCCTCAGTCAGTCTCTCCACTCTACCTCCCAGTAACATGGCCCAGTTagaggtgctgctgctgcttcaagcTCTCGGGACCATCAGGACTCAGCTGGTCctccaacatcctcctcctgatcactctgaCAGAGAC
>TU302852
tgtgtgtgaagcTAATCTCTACCGTTGCTATGACAGCGTTGTAATCCTCTCACCTATTAACGTTAGTTTAAATGTGAACGGTTAATTTAGAAGAGAAGATGTTACTGTGGGGGGGGTAAAGGTCTCTGTGAGGTAACGGTTGTTTCAGCGGGGGGGCAGTTAAGTTTATCAGACTAACAGCTGACTGTCCTGCAGCGACGACAGTCAACATATGCTTTCCACACTTGGCTCCACTCTGTAGTCTGACGTATGCTGAGTCAGCTGATTCTGATGGAGACAGAGCCCCCCCCACTGACCCAGAGAGGATAATGTCGGCCAATCAACTCGCCCGACATCCTTCTTTCATGGCCACGTGCCGTTGCTAATGTGGAAGCGTGCAGAGCCTCAGTCAGTCTCTCCACTCTACCTCCCAGTAACATGGCCCAGTTagaggtgctgctgctgcttcaagcTCTCGGGACCATCAGGACTCAGCTGGTCctccaacatcctcctcctgatcactctgaCAGAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302849 True 807 lncRNA 0.47 2 28106828 28166948
TU302852 False 516 lncRNA 0.51 2 28106828 28107380

Neighbor

gene id symbol gene type direction distance location
LOC120552593 NA coding downstream 794463 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 881836 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 901675 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 917284 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 977434 27046827 ~ 27129394 (-)
LOC120552567 NA coding upstream 136386 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 210131 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 763283 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 958266 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 984486 29151434 ~ 29161971 (-)
G223701 NA non-coding downstream 56928 28048861 ~ 28049900 (-)
G223735 NA non-coding downstream 77181 28028857 ~ 28029647 (-)
G223726 NA non-coding downstream 96017 28009994 ~ 28010811 (-)
G223718 NA non-coding downstream 153175 27948615 ~ 27953653 (-)
G223682 NA non-coding downstream 199455 27906816 ~ 27907373 (-)
G223747 NA non-coding upstream 11622 28178570 ~ 28186638 (-)
G223714 NA non-coding upstream 12754 28179702 ~ 28182109 (-)
G223752 NA non-coding upstream 64122 28231070 ~ 28236071 (-)
G223697 NA non-coding upstream 84477 28251425 ~ 28302968 (-)
G223754 NA non-coding upstream 98517 28265465 ~ 28317000 (-)
G223681 NA other downstream 190995 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 310977 27756346 ~ 27795851 (-)
G223665 fars2 other downstream 352494 27750705 ~ 27754334 (-)
G223645 NA other downstream 366856 27738782 ~ 27739972 (-)
LOC120552596 NA other downstream 406447 27694340 ~ 27700381 (-)
G223746 NA other upstream 9417 28176365 ~ 28195425 (-)
LOC120552566 NA other upstream 614942 28781890 ~ 28846253 (-)
LOC120552583 NA other upstream 1133742 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 1312861 29479809 ~ 29543351 (-)
G223911 NA other upstream 1383447 29550395 ~ 29563368 (-)

Expression


Co-expression Network