G223692


Basic Information

Item Value
gene id G223692
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28708699 ~ 28774247 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302858
aagcatttagtgttaCAGTGGCTTTGAATCAGTTAAGGTTTTATATTCTTTCTGGTTGATACgggcaaatatttatttatatatatatataatatgagaTACGGCAGTACCTTCATAAATtatgaaataaatacagaaacagaaagcAAATCAGACATCTATATAAATGTGGGttaagtgtctctctctctctctctctctctctctctctctctctctctctctctctgtctaatcagcatcttgatatggcacacctgtgaggtggatggattttctcgacaaaggagaagtgctcactaacacagagtgtgtgtgtgtgtgtgtctgtgtgtgtgatagagagTGTGTGGAtatctgtgtgagtgtatgaAGCTAATCTCTTCCGTTGCTATGACAGTGTGGTAATCACCTCACCTATTAACGTTAGTTTAAATCTGAACGGTTAATTTAGAAGAGAAGATGTTactgtggggtgggggggtcggGGGTAAAGGTCTCTGTGATGTAACGGTTGTTTCAGCGGGGGGGCAGTTAAGTTTATCAGACTAACAGCTGACTGTCCTGCAGCGACGACAGTCAAGTTTACCATTGATggtaaaatgtgaaatgttagcAAACATATGCTTTCCACACTTGGCTCCACTCTGTAGTCTGACGTATGCTGAGTCAGCTGATTCTGATGGAGACAGAGCCCCCGTCACTGACCCAGAGAGGCTAATGTCGGCCAATCAACTTGCCCGACATCCTTCTTTCATGGCCACGTGCCGTTGCTAATGTGGAAGCGTGCAGAGCCTCAGTCAGTCTCTCCACTCTACCTCCCAGTAACATGGCCCAGTTagaggtgctgctgctgcttcaagcTCTCGGGATCATCAGGACTCAGCTGGTCctccaacatcctcctcctgaTCAGTCTGACAGAGATCACCATCTGATGAGAGAAGAAGACAACAGAAGAGATAAATAGGGCTGTGACTGTATGTAGTTTTCATACCGTGGTGAAGAAGTAACGTATCACAACAGTATGGTGGTTAACGGGAGTAAGCTATgagctagctgctaggctaatgtatctctccttctgtctccctctctctccttatccctctccctcctctctctcctctctctctctcgccttcctttctctccttctccttctccctctctctccctgtctctctttctctctctccttcactaTCTCCCTACCTCCCTCTATccactctctcccctttctctcactctccctctctttatcctctcctctctctctctctctctctctcacaaacacaacagacCTGACTGTGAATACTCCTCCGTTCAGATTAATTAACCCCATTAATTATTCTACACCCTCCAATACAGTAATGCAGGTGGTGGTTTGAGCCTTAAACTTGGTTTGTGatccactaattaacacacagaagaagaagaagttaatTTTTCCCACATCGATCTTTCCCCCCCAGAGAAGACGGCTGGAGTCCATCTGGAGTTTAATGGTTAGTATTATGAAgttattatctgtatttattCAGGGTTTTACTGCATAGAGAAAGTTTTGGCGCCCcctaaagaggttttagccGGCGCCAAAGGAATATCACGAGCTCCAAAACGTCTGATTTTCAGCAGCCCCCTCTCATCCACAGTCACTACTGTATGCAGCTGGCTCTGATTTGACTGACATGAACGCTCCGCTGTATAGAGCTGATGGTATCTCTGTTAGCAGAGTCAGACTGTACCGGACTCTCCAGGTGACCATGCTGCTCTGGGGACCATCTATCAGTGTTACATTAAGACAGTTTCAtatcctgtcaaaataaaaactatcgTATGTCGCGTTAAGTCCTTTTCCCCGTGTTTTGGTACAGTTGATGTTACCACCTGATGCGAGCCATATGGGAGGATCCTACACATGAAACTCAAAGTTTTGAGGTCTTTAGCAGCGTTGACCTGACTCCCTGAATAAGCTGCAGAGACGTggtctctctccacctctctgcTGAGCCCCGTTCACCTAACAGCATCAGTTCAACTGGATTTCACACTATGATGGTTACCTTTACAATGAATCAGCGGTTCACATGGCTACTGAACTGTAGGGATGGTCTGTTACACTACTGTAGTCCTACAGGCTATTCAACATCACTGACTATTTATTtatcaatatttcaaaataatacatcccatgggcccaccacctgtgggaggaaccgctggggtcgggtgcgctgccacatgggtggcagtgaaggtcaggggcctcgacggaccagaaccgggcagcagacgctggctctggggacgtggaacgtcacctctctgtgggggaaggagccggaactggtgtgGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302858 True 2368 lncRNA 0.46 2 28708699 28774247

Neighbor

gene id symbol gene type direction distance location
LOC120552567 NA coding downstream 353052 28303334 ~ 28355647 (-)
LOC120552593 NA coding downstream 1396334 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 1483707 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 1503546 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 1519155 27136771 ~ 27189544 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 155984 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 350967 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 377187 29151434 ~ 29161971 (-)
dnph1 NA coding upstream 828855 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 855058 29629305 ~ 29672772 (-)
G223778 NA non-coding downstream 14230 28658909 ~ 28694469 (-)
LOC120552606 NA non-coding downstream 55775 28651955 ~ 28652924 (-)
G223770 NA non-coding downstream 87133 28585799 ~ 28621566 (-)
G223764 NA non-coding downstream 112844 28502096 ~ 28595855 (-)
G223763 NA non-coding downstream 234831 28472652 ~ 28473868 (-)
G223798 NA non-coding upstream 76416 28850663 ~ 28852850 (-)
G223700 NA non-coding upstream 88128 28862375 ~ 28902431 (-)
G223808 NA non-coding upstream 133794 28908041 ~ 28928511 (-)
G223847 NA non-coding upstream 368681 29142928 ~ 29145651 (-)
G223851 NA non-coding upstream 389709 29163956 ~ 29165000 (-)
G223686 LOC100697526 other downstream 190773 28011028 ~ 28517926 (-)
G223746 NA other downstream 513274 28176365 ~ 28195425 (-)
G223681 NA other downstream 792866 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 912848 27756346 ~ 27795851 (-)
G223665 fars2 other downstream 954365 27750705 ~ 27754334 (-)
LOC120552566 NA other upstream 7643 28781890 ~ 28846253 (-)
LOC120552583 NA other upstream 526443 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 705562 29479809 ~ 29543351 (-)
G223911 NA other upstream 776148 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 837745 29611992 ~ 29620659 (-)

Expression


Co-expression Network