G223758


Basic Information

Item Value
gene id G223758
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28327142 ~ 28517819 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302940
AAATTTCTATCAGTTcacttgttttctgtgtttgtacaaatcacaacaactctttgtttgttttcagtttgtcaGTCTGAACAGTTTGTCTCCAGATGTAGTCTGGACTCAAACTGGATCAGTGTTTGTCAGAAAACTTTAAGATTTATTCTTCAATGTGATGcaaaattaaatcaaaatttgaaattgttttttcatgtgaaacagtcataattaaaaaaaaagaaatagggctgtacaattTGTAGATAAGTCATATTGTGATTTACAATACTATGATTGCAAAAATAAATGCACcaaacagtaaataaaaaatgtcttgcTAAAGAAACCCAGAAAACCCTCAACATGTTGGGTTCCTTAAAAAAGATCAAcgaaatatatagaatataaaaacataaaaacatagtctataaaaaggaagaaaggaagaattAAATGAgtagagaaaataaagaatgaagaaagagagaaagaaaagtaattaaaataaaaacaagggaCATGTTTACTACAGTTCCAGATGTTTTAAATGATAGAGGAGaaagtttggtttggtttgctCAACAGCACAATTAAAAAATAgaacaaataagaaaaatacaaattctCattaaaataatacattgtaTATGTAACATTAAGGATGGGTGTAATAAAAGAACTATTGATTAAGTTACAAAATCTACTTTGTCCAACCTGTGGGTAAAGTGTGAAGAACACCAAGCTTCTTAAGCCCCAGTGTCTTCTTCTGTGGTTTCTACTGTGGGTAAAGTGAAGGCTGTTACAACGTGGAGACTGGAGTGGACACTGAGTGAGACGCACACAGCTCACCTTTTAGTTTCCTTAAATCACACAGTTTATGAGGTTAGTTATTCACACACAGTGACATCATGACTGGGATTAGATTATTTGTGcagcattaaaggggtgatagaatggttcTATAGGGTATTTCAtgctgttccttaaggtctcctaatagggtatgtaacattggttgggctgaaaatgtctcttttgctgtttttggCCCTAATGCTACCCTGTTAAATGGGACTGGACTGAAACGAGAGCTTTTCTGCCTTATATGgtctgctcatgaatatttagatgagctgcacgctgattagTTGAGCTtagtacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacaacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacagac
>TU302941
TTCTATCAGTTcacttgttttctgtgtttgtctgagtacaaatcacaacaactctttgtttgttttcagtttgtcaGTCTGAACAGTTTGTCTCCAGATGTAGTCTGGACTCAAACTGGATCAGTGTTTGTCAGAAAACTTTAAGATTTATTCTTCAATGTGATGcaaaattaaatcaaaatttgaaattgttttttcatgtgaaacagtcataattaaaaaaaaagaaatagggctgtacaattTGTAGATAAGTCATATTGTGATTTACAATACTATGATTGCAAAAATAAATGCACcaaacagtaaataaaaaatgtcttgcTAAAGAAACCCAGAAAACCCTCAACATGTTGGGTTCCTTAAAAAAGATCAAcgaaatatatagaatataaaaacataaaaacatagtctataaaaaggaagaaaggaagaattAAATGAgtagagaaaataaagaatgaagaaagagagaaagaaaagtaattaaaataaaaacaagggaCATGTTTACTACAGTTCCAGATGTTTTAAATGATAGAGGAGaaagtttggtttggtttgctCAACAGCACAATTAAAAAATAgaacaaataagaaaaatacaaattctCattaaaataatacattgtaTATGTAACATTAAGGATGGGTGTAATAAAAGAACTATTGATTAAGTTACAAAATCTACTTTGTCCAACCTGTGGGTAAAGTGTGAAGAACACCAAGCTTCTTAAGCCCCAGTGTCTTCTTCTGTGGTTTCTACTGTGGGTAAAGTGAAGGCTGTTACAACGTGGAGACTGGAGTGGACACTGAGTGAGACGCACACAGCTCACCTTTTAGTTTCCTTAAATCACACAGTTTATGAGGTTAGTTATTCACACACAGTGACATCATGACTGGGATTAGATTATTTGTGcagcattaaaggggtgatagaatggttcTATAGGGTATTTCAtgctgttccttaaggtctcctaatagggtatgtaacattggttgggctgaaaatgtctcttttgctgtttttggCCCTAATGCTACCCTGTTAAATGGGACTGGACTGAAACGAGAGCTTTTCTGCCTTATATGgtctgctcatgaatatttagatgagctgcacgctgattagTTGAGCTtagtacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacaacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacagac
>TU302942
TTCTATCAGTTcacttgttttctgtgtttgtctgagtacaaatcacaacaactctttgtttgttttcagtttgtcaGTCTGAACAGTTTGTCTCCAGATGTAGTCTGGACTCAAACTGGATCAGTGTTTGTCAGAAAACTTTAAGATTTATTCTTCAATGTGATGcaaaattaaatcaaaatttgaaattgttttttcatgtgaaacagtcataattaaaaaaaaagaaatagggctgtacaattTGTAGATAAGTCATATTGTGATTTACAATACTATGATTGCAAAAATAAATGCACcaaacagtaaataaaaaatgtcttgcTAAAGAAACCCAGAAAACCCTCAACATGTTGGGTTCCTTAAAAAAGATCAAcgaaatatatagaatataaaaacataaactataaaaaggaagaaaggaagaattAAATGAGTAGAGACAATAAagaatgaagaaagagagagaaagaaaagtaattaaaataaaaaaacaagggaCATGTTTACTACAGTTCCAGATGTTTTAAATGATAGAGGAGaaagtttggtttggtttgctCAACAGCACAATTAAAAAATAgaacaaataagaaaaataaaaattctcattaaaataatacattgtaTATGCCACATTAAGGATGGGTGTAATAAAAGAACTATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302940 False 1291 lncRNA 0.35 4 28410371 28517819
TU302941 True 1293 lncRNA 0.35 3 28410371 28464606
TU302942 False 669 lncRNA 0.28 3 28327142 28464606

Neighbor

gene id symbol gene type direction distance location
LOC120552593 NA coding downstream 1014777 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 1102150 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 1121989 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 1137598 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 1197748 27046827 ~ 27129394 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 412412 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 607395 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 633615 29151434 ~ 29161971 (-)
dnph1 NA coding upstream 1085283 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 1111486 29629305 ~ 29672772 (-)
G223754 NA non-coding downstream 10142 28265465 ~ 28317000 (-)
G223697 NA non-coding downstream 24174 28251425 ~ 28302968 (-)
G223752 NA non-coding downstream 91071 28231070 ~ 28236071 (-)
G223747 NA non-coding downstream 140504 28178570 ~ 28186638 (-)
G223770 NA non-coding upstream 67980 28585799 ~ 28621566 (-)
G223696 NA non-coding upstream 128245 28646064 ~ 28711709 (-)
LOC120552606 NA non-coding upstream 134136 28651955 ~ 28652924 (-)
G223778 NA non-coding upstream 141090 28658909 ~ 28694469 (-)
G223694 NA non-coding upstream 149255 28667074 ~ 28761210 (-)
G223746 NA other downstream 131717 28176365 ~ 28195425 (-)
G223681 NA other downstream 411309 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 531291 27756346 ~ 27795851 (-)
G223665 fars2 other downstream 572808 27750705 ~ 27754334 (-)
G223645 NA other downstream 587170 27738782 ~ 27739972 (-)
LOC120552566 NA other upstream 264071 28781890 ~ 28846253 (-)
LOC120552583 NA other upstream 782871 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 961990 29479809 ~ 29543351 (-)
G223911 NA other upstream 1032576 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 1094173 29611992 ~ 29620659 (-)

Expression


Co-expression Network