G223762


Basic Information

Item Value
gene id G223762
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28405629 ~ 28407886 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU302946
gttgtgttctataaacgatctgacgaaaaactgttactgtgagatataaagtctacttgtgctacattgggggggggagtaaaagaaaagaacaggACGTCGCACGACTCGCACCACACTGCGGcgattgcttctttttttttatctgaacgcagcttcccgCTGAagtacagagctcatttaagatgatGCTCTGACGTCCCGTTTCCCTGAAGGCAGCGCGGAGCTGCGCCgaacaaagctgacagaagccCAGAAGAGAAGAGTTCTGGTCCAGAGTCTGGTCCagtcgcagtgctgtaaactggcagcttttaatggaGCAGACCTCTGgtttttgcaagtagtttaaagtgtaaacatgtattgttattatcTGAACGCCCTCTGGGGGGGGAATCAGGCCCACCTTGACTTAATCCAGGCCCACCCATCTGTAACGTTCTGCATCcgccactgcacacacacacctatgctTTCAGCACTGTTCGCTGAGGATCCATGTTGGAAAATAAAGTTAACGTCCCGTGAACCGCTGCCTGCACACCGCCCATTGCGAGTCCACTGCGCCCCTGATCTAAATCCACATGTCCCGCTCAGTTGTCTGatatctcctccttttctctgggccagtattcaGTCTGatatctcctccttttctctgggccagtattcaGTCTGatatctcctccttttctctgggccagtattcaGTCTGatatctcctccttttctctgggccagtattctGTATCTCCTGAGAGAGCTCCAGCCAGCGGGGGGGGGCAGCAGGGTCTGACAGTCCAGGCAGACAGCCAGCCATCTGGGGGGGCACTGCACCGCTGTCACGGCAAACTGTGGAGCTCCTCAACTCCCAAACAGTCGTACTAAATTTGCagttagccatacatttttataaaacggcccatatttgagctttagatagttgatttctcgcttaaaataatctcagaagtgaatttagtaatgcaaCAGCAGAGGAACACTGTATAAACTTTCTGAGATTTGCGCGAACgagatttagaagactaactgaccttagatcagttagtggcctatgtaaattttggggtgttacaaagatagaaggtagagccaaatgaggaggatttgGGATGCTTACGGAAGcttctagctttgttgagattggcccgttttcagcagcagtttcaaatagtgagatctgcagaggaaagaggtttCATCAGGATttagagcttctatgtatgtcctagttaccctccaaactgtcctTTACAACTAGGACAGGCTAACATCAGGTTTACATT
>TU302947
CAGAAGAGAAGAGTTCTGGTCCAGAGTCTGGTCCagtcgcatagtttaaagtgtaaacatgtattgttattatcTGAACGCCCTCTGGGGGGGGAATCAGGCCCACCTTGACTTAATCCAGGCCCACCCATCTGTAACGTTCTGCATCcgccactgcacacacacacctatgctTTCAGCACTGTTCGCTGAGGATCCATGTTGGAAAATAAAGTTAACGTCCCGTGAACCGCTGCCTGCACACCGCCCATTGCGAGTCCACTGCGCCCCTGATCTAAATCCACATGTCCCGCTCAGTTGTCTGatatctcctccttttctctgggccagtattcaGTCTGatatctcctccttttctctgggccagtattcaGTCTGatatctcctccttttctctgggccagtattcaGTCTGatatctcctccttttctctgggccagtattctGTATCTCCTGAGAGAGCTCCAGCCAGCGGGGGGGGGCAGCAGGGTCTGACAGTCCAGGCAGACAGCCAGCCATCTGGGGGGGCACTGCACCGCTGTCACGGCAAACTGTGGAGCTCCTCAACTCCCAAACAGTCGTACTAAATTTGCagttagccatacatttttataaaacggcccatatttgagctttagatagttgatttctcgcttaaaataatctcagaagtgaatttagtaatgcaaCAGCAGAGGAACACTGTATAAACTTTCTGAGATTTGCGCGAACgagatttagaagactaactgaccttagatcagttagtggcctatgtaaattttggggtgttacaaagatagaaggtagagccaaatgaggaggatttgGGATGCTTACGGAAGcttctagctttgttgagattggcccgttttcagcagcagtttcaaatagtgagatctgcagaggaaagaggtttCATCAGGATttagagcttctatgtatgtcctagttaccctccaaactgtcctTTACAACTAGGACAGGCTAACATCAGGTTTACATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302946 True 1310 lncRNA 0.47 2 28405629 28407886
TU302947 False 1007 lncRNA 0.47 2 28405629 28406685

Neighbor

gene id symbol gene type direction distance location
LOC120552567 NA coding downstream 49982 28303334 ~ 28355647 (-)
LOC120552593 NA coding downstream 1093264 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 1180637 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 1200476 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 1216085 27136771 ~ 27189544 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 522345 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 717328 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 743548 29151434 ~ 29161971 (-)
dnph1 NA coding upstream 1195216 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 1221419 29629305 ~ 29672772 (-)
G223703 NA non-coding downstream 2707 28400963 ~ 28402922 (-)
G223756 NA non-coding downstream 5162 28310840 ~ 28400467 (-)
G223761 NA non-coding downstream 9753 28395124 ~ 28395876 (-)
G223757 NA non-coding downstream 77935 28313890 ~ 28327694 (-)
G223754 NA non-coding downstream 88629 28265465 ~ 28317000 (-)
G223763 NA non-coding upstream 64766 28472652 ~ 28473868 (-)
G223764 NA non-coding upstream 94210 28502096 ~ 28595855 (-)
G223770 NA non-coding upstream 177913 28585799 ~ 28621566 (-)
G223696 NA non-coding upstream 238178 28646064 ~ 28711709 (-)
LOC120552606 NA non-coding upstream 244069 28651955 ~ 28652924 (-)
G223746 NA other downstream 210204 28176365 ~ 28195425 (-)
G223681 NA other downstream 489796 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 609778 27756346 ~ 27795851 (-)
G223665 fars2 other downstream 651295 27750705 ~ 27754334 (-)
G223645 NA other downstream 665657 27738782 ~ 27739972 (-)
LOC120552566 NA other upstream 374004 28781890 ~ 28846253 (-)
LOC120552583 NA other upstream 892804 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 1071923 29479809 ~ 29543351 (-)
G223911 NA other upstream 1142509 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 1204106 29611992 ~ 29620659 (-)

Expression


Co-expression Network